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1,000 results • Page
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News:
New version of ElasticBLAST (1.0.0) available.
NCBI
ElasticBLAST
BLAST
12 weeks ago by
PeterC_NCBI
▴ 190
0
votes
1
reply
299
views
News:
Courses in January - still a few seats available
R-Shiny
Genomics
Unix
R
updated 6 weeks ago by
Ram
38k • written 3 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
188
views
News:
Sex Chromosome Evolution course
Genomics
Sex-Chromosome-Evolution
updated 3 months ago by
Ram
38k • written 3 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
234
views
News:
Cellosaurus release 44 is available
cellosaurus
cell-line
updated 3 months ago by
Ram
38k • written 3 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
215
views
News:
Introductory video to the Cellosaurus
cellosaurus
cell-line
updated 3 months ago by
Ram
38k • written 3 months ago by
Amos Bairoch
▴ 110
0
votes
3
replies
496
views
News:
Nvidia Clara Parabricks is FREE for R&D
nvidia
workflow
gpu
updated 3 months ago by
4galaxy77
2.6k • written 3 months ago by
Pierre Lindenbaum
153k
2
votes
3
replies
334
views
News:
NCBI Comparative Genome Viewer now allows searches for genes across aligned assemblies
Browser
NCBI
Alignments
Genome
3 months ago by
PeterC_NCBI
▴ 190
1
vote
6
replies
676
views
News:
Course - FLOW CYTOMETRY ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometry
R
updated 9 weeks ago by
synat.keam
▴ 70 • written 3 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
182
views
News:
INTRODUCTION TO ANALYTICAL PALEOBIOLOGY: FOSSIL RECORD BIASES, DIVERSITY, & BIOGEOGRAPHY
Biogeography
Paleobiology
R
3 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
195
views
News:
Analysis of Cancer Genomes Using R and Bioinformatic Tools
Genomics
Cancer-Genomics
R
updated 3 months ago by
Ram
38k • written 3 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
308
views
News:
course - GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Long-reads
Assembly
Nanopore
Genome
3 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
166
views
News:
Online training - VERSION CONTROL FOR RESEARCHERS
Version
Control
Git
Github
3 months ago by
carlopecoraro2
★ 2.3k
0
votes
1
reply
236
views
News:
Research Training In NGS Data Analysis
analysis
data-analysis
updated 3 months ago by
Ram
38k • written 3 months ago by
RASALSI
• 0
0
votes
0
replies
278
views
News:
Bayesian regression modeling in R course
RegressionModeling
Bayesian
R
3 months ago by
carlopecoraro2
★ 2.3k
0
votes
4
replies
450
views
News:
Ensembl Release 104 and newer GTF files no longer have genes sorted by position
Ensembl
GTF
updated 3 months ago by
Ben_Ensembl
★ 2.2k • written 3 months ago by
dlaehnemann
▴ 10
0
votes
0
replies
221
views
News:
Genome Assembly and Annotation course
Annotation
Nanopore
GenomeAssembly
Pacbio
4 months ago by
carlopecoraro2
★ 2.3k
3
votes
0
replies
953
views
News:
Changes to the default NCBI BLAST nucleotide database (nt). Learn more and provide feedback!
NCBI
Databases
BLAST
4 months ago by
PeterC_NCBI
▴ 190
0
votes
0
replies
228
views
News:
Nextflow online training
Nextflow
Workflow
Reproducibility
updated 3 months ago by
Ram
38k • written 4 months ago by
carlopecoraro2
★ 2.3k
0
votes
2
replies
946
views
News:
:: FINAL CALL :: Next-Generation Sequencing Data Analysis: A Practical Introduction (December 12-14, 2022 in Munich, Germany)
rnaseq
dnaseq
sequencing
ngs
workshop
4 months ago by
David Langenberger
9.9k
0
votes
0
replies
261
views
News:
The Association for Single Cell Analysis (ASCA)
genomics
singlecell
metabolomics
sequencing
proteomics
4 months ago by
dnsv.ev
• 0
0
votes
0
replies
213
views
News:
Deep Learning in Population Genomics and Phylogeography
DeepLearning
Phylogeography
PopulationGenomics
4 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
228
views
News:
Metabarcoding in Microbial Ecology Workshop
Qiime2
R
Metabarcoding
Microbial-Ecology
4 months ago by
carlopecoraro2
★ 2.3k
1
vote
2
replies
350
views
News:
Gene Set Enrichment Analysis in R/Bioconductor
Gene-Set-Enrichment-Analysis
R
Cancer-Genomics
GSEA
4 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
223
views
News:
Analysis of RNA sequencing data with R/Bioconductor course.
Bioconductor
RNAseq
R
4 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
329
views
News:
Winter School in Bioinformatics
course
workshop
updated 3 months ago by
Ram
38k • written 4 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
298
views
News:
Introduction to Nextflow
Nextflow
updated 3 months ago by
Ram
38k • written 4 months ago by
carlopecoraro2
★ 2.3k
0
votes
2
replies
452
views
News:
Seascape Genomics in R
Genomics
Seascape
R
updated 3 months ago by
Ram
38k • written 4 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
217
views
News:
Bioinformatics courses in November
Bioconductor
Genomics
R
updated 3 months ago by
Ram
38k • written 5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
282
views
News:
Flow cytometry analysis with R/Bioconductor course
Bioconductor
R
Cytometry
Flow
5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
221
views
News:
course: RNA-seq analyses in non-model organisms
differential
Bioconductor
RNAseq
expression
non-model
organisms
analysis
R
5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
246
views
News:
course - Developing R/Bioconductor packages for genomics
developing
package
Bioconductor
Genomics
R
5 months ago by
carlopecoraro2
★ 2.3k
2
votes
0
replies
261
views
News:
Four NCBI workshops in October (BLAST, Primer-BLAST, Metagenome analysis, Structures in iCn3D)
metagenomics
MagicBLAST
BLAST
NCBI
Primer-BLAST
5 months ago by
PeterC_NCBI
▴ 190
0
votes
0
replies
322
views
News:
course - Unix and shell scripting for bioinformatics
bash
Shell-scripting
Unix
updated 3 months ago by
Ram
38k • written 5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
272
views
News:
course: Data Visualization in Python
Visualisation
Python
Data
updated 5 months ago by
GenoMax
126k • written 5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
253
views
News:
Seascape Genomics in R course
Genomics
R
Seascape
Population
5 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
266
views
News:
Cellosaurus API
line
cell
API
5 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
270
views
News:
Cellosaurus release 43 is available
cellosaurus
cell-line
updated 3 months ago by
Ram
38k • written 5 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
225
views
News:
Genomics Webinar: Using Mastermind’s New ClinVar Integration to Accelerate Clinical Diagnoses
variant-interpretation
genomics
database
webinar
updated 3 months ago by
Ram
38k • written 6 months ago by
Kate
• 0
0
votes
0
replies
208
views
News:
course: Population Genomic Inference from Low-coverage Whole-genome Sequencing Data
whole-genome
genomics
population
low-coverage
sequencing
updated 6 months ago by
Jeremy Leipzig
21k • written 6 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
212
views
News:
:: FINAL CALL :: RNA-Seq Data Analysis Workshop (October 25 - 28, 2022 in Leipzig, Germany) - 2 seats left
RNA-Seq
workshop
transcriptomics
6 months ago by
David Langenberger
9.9k
0
votes
0
replies
197
views
News:
Getting the most out of R course - last call
ggplot2
R
tidyverse
6 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
273
views
News:
The NCTR Indel Calling from Oncopanel Sequencing Data Challenge Winners have been announced!
FDA-challenge
updated 3 months ago by
Ram
38k • written 6 months ago by
sarah_p
▴ 10
1
vote
0
replies
238
views
News:
Webinar (free) on Multimodal Single-Cell Data from winner of NeurIPS 2021
ATAC-seq
CITE-seq
scRNA-seq
6 months ago by
Alexander
▴ 70
1
vote
0
replies
247
views
News:
course Reproducible Analysis With R
R
Reproducibility
analysis
Data
6 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
272
views
News:
Virtual Genome Assembly workshop
Genome
Workshop
assembly
Virtual
6 months ago by
singh.vijender
▴ 70
10
votes
4
replies
620
views
News:
Good morning
good
morning
updated 6 months ago by
Istvan Albert
96k • written 6 months ago by
Kevin Blighe
84k
6
votes
7
replies
2.7k
views
News:
New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
DiffBind
ChIP-seq
deepTools
visualization
ATAC-seq
6 months ago by
Rory Stark
★ 1.7k
0
votes
0
replies
285
views
News:
Sex Chromosome Evolution course
course
Genomics
updated 3 months ago by
Ram
38k • written 6 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
239
views
News:
Online training - Data visualization in R with ggplot2
Visualization
ggplot2
R
Data
6 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
304
views
News:
Searching for people who can share experience (give free webinars/discuss) on multimodal single cell data
ATAC-seq
CITE-seq
scRNA-seq
6 months ago by
Alexander
▴ 70
1,000 results • Page
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Answer: How to implement this two-stage one-to-many workflow using WDL?
Creating workflows with snakemake and conda
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Comment: samtools idxstats not removing ChrM
The Biostar Handbook. A bioinformatics e-book for beginners.
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
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Comment: gene filtering for agilent microarray using Limma
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Di Wu
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Dear Prof. Kevin Blighe, many thanks for your quick reply. About the `correlation` value, I used the following code for getting the value. …
Comment: GATK GenotypeGVCFs explain
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Pierre Lindenbaum
153k
https://gatk.broadinstitute.org/hc/en-us/articles/360035531852-Intervals-and-interval-lists
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thank you
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It limits the operation to some genomic regions given as parameter
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GenotypeGVCFs takes a set of GVCF files called with HaplotyperCaler and output a VCF file.
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CpGs may be annotated to more than >1 gene simply because gene regions overlap on the genome. If you want to associate each gene to a me…
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Please give a look to [this post][1] for increasing the probability to get an answer. If I may add some needed info: 1. What exactly do y…
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Wow, thank you so much for your explanation! My conda channel is indeed set to strict priority. Should packages with different dependencie…
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You can use BioMart to convert your "gene-IDs" to gene symbols, but you need to specify from which database your gene identifiers come from
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If you search "DAVID dotplot" on this forum, you have many answers to your question. Note that you can also perform DAVID Functional Enrich…
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You can try https://genebe.net , it is similar to Varsome though...
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Hi, free ACMG implementation without restrictions can be found at https://genebe.net . AFAIK there is also a free API coming.
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I don't have the data available. I want to identify such datasets. The overall aim is to determine what factors influence fastq data qualit…
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