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News: Course - Data Manipulation and Visualization in Python
Data-Manipulation Data-Visualisation Python
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
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489
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News: Kindle edition of book NO LONGER available. Book available for free
Computational-Biology
9 months ago by sinha.shriprakash ▴ 20
0
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0
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495
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News: Course on Generalised Linear Mixed Models in R
GLMM R Statistics Mixed-Models
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
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452
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Systems-Biology Network-Analysis Bioconductor
updated 8 months ago by 43k • written 9 months ago by ★ 2.5k
0
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0
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368
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News: course on Reproducibility data analysis with R
R Reproducibility Git Github
10 months ago by carlopecoraro2 ★ 2.5k
38
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8
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1.6k
views
6 follow
News: What happens when a bioinformatician has his own genome sequenced for $300?
DNAseq DNA WGS
updated 10 months ago by 35k • written 10 months ago by 11k
4
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637
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News: A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS RNA-Seq single-cell workshop
10 months ago by David Langenberger 11k
0
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0
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690
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News: Hands-On NGS Data Analysis Courses 2023
RNA-seq DNA-seq Workshop
updated 10 months ago by 43k • written 10 months ago by 11k
1
vote
0
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491
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News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
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0
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428
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News: Good bioinformatics training resources
NGS
updated 10 months ago by 161k • written 10 months ago by ▴ 80
0
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0
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532
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News: Generalized Linear Models (GLM) course in R
R GLM statistics
10 months ago by carlopecoraro2 ★ 2.5k
0
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0
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461
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News: course - Advanced Python programming
Python Deep-Learning Machine-Learning
updated 8 months ago by 43k • written 10 months ago by ★ 2.5k
3
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2
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678
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News: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomics, Jul 31 - Aug 4, 2023
VCF SARS-CoV-2 NCBI Codeathon
10 months ago by PeterC_NCBI ▴ 410
0
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0
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413
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News: Virtual Genome Annotation Workshop
annotation genome workshop
10 months ago by mia.nahom ▴ 10
0
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0
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677
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News: Course - Longitudinal data analysis in R
Longitudinal-Data R Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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406
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News: New version of ElasticBLAST (1.1.0) available from NCBI
ElasticBLAST BLAST. NCBI
11 months ago by PeterC_NCBI ▴ 410
0
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0
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372
views
News: Course - Introduction to CRISPR for Ecology and Evolution Studies
Genomics CRISPR
11 months ago by carlopecoraro2 ★ 2.5k
0
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0
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1.5k
views
News: GWAS course
GWAS R
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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480
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News: Course - RNAseq data analysis with R/Bioconductor
R Tidyverse RNA-seq Bioconductor
updated 8 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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434
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News: Course - Multiplex imagine analysis/ Spatial Omics
Multiplex-Image-Analysis Spatial-Omics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
3
votes
3
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1.2k
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
11 months ago by PeterC_NCBI ▴ 410
0
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0
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371
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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384
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News: PROGRAMMING IN R : MOVING FROM BEGINNER TO ADVANCED
Programming Training R
11 months ago by carlopecoraro2 ★ 2.5k
1
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0
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833
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News: NCBI BLAST+ 2.14.0 release includes faster protein and translation search options
NCBI BLAST
11 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
530
views
News: Get Your Science going in 10 Minutes with the Biostar Handbook!
education biostarhandbook
updated 11 months ago by 43k • written 11 months ago by 100k
0
votes
0
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387
views
News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Network-Analysis Bioconductor Systems-Biology
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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425
views
News: Course - Phylogenetic Comparative Methods in R
Comparative-Methods R Phylogenetics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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2
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1.2k
views
News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
11 months ago by David Langenberger 11k
1
vote
0
replies
434
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News: Course - Statistics for biologists with R
Statistics R
11 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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475
views
News: GWAS course in June
GWAS
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
1
reply
660
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News: 20% Off - Bioinformatics Pipeline Development with Nextflow (May 15-17 in Leipzig, Germany)
NGS nextflow RNAseq pipelines DNAseq
12 months ago by David Langenberger 11k
0
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0
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458
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News: Single-cell RNAseq with R/Bioconductor course
scRNAseq Bioconductor R
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
votes
0
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367
views
News: Environmental Metagenomics - 17-21 April
MAGs Metagenomics
updated 12 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
0
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448
views
News: Announcing the 3rd round of the Nextflow and nf-core mentorship
nf-core mentorship nf_core nextflow
updated 12 months ago by 43k • written 12 months ago by ▴ 470
1
vote
0
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432
views
News: New open access publication on ElasticBLAST in BMC Bioinformatics
NCBI ElasticBLAST BLAST
12 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
436
views
News: Pangenomics course in April!
Pangenomics Prokaryotic-Genomics
12 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
607
views
News: Talk from Aaron Lun on Orchestrating Single-Cell Analysis With Bioconductor
scrna-seq
updated 12 months ago by 43k • written 12 months ago by 81k
0
votes
0
replies
445
views
News: Cellosaurus release 45 is available
knowledgebase cell-line
updated 9 months ago by 43k • written 12 months ago by ▴ 120
0
votes
0
replies
399
views
News: Virtual RAD-seq Analysis Workshop!
workshops popgen genomics rad-seq
12 months ago by mia.nahom ▴ 10
0
votes
0
replies
740
views
News: The Canadian Bioinformatics Workshops are back for summer 2023
CBW training workshop
12 months ago by bioinformatics.ca • 0
0
votes
0
replies
410
views
News: ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j cypher graph knowledge
12 months ago by Stephen • 0
0
votes
0
replies
476
views
News: Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine declmed declarative icfp precision
12 months ago by Stephen • 0
0
votes
0
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418
views
News: Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian RProject course online
13 months ago by Sole • 0
0
votes
2
replies
875
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
10
votes
4
replies
1.2k
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 13 months ago by ▴ 30 • written 14 months ago by 11k
1
vote
0
replies
930
views
News: Summer School in Bioinformatics
Genomics Docker RNA-seq
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
1
vote
1
reply
653
views
News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
13 months ago by jared.andrews07 ★ 16k
1
vote
0
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432
views
News: Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements TE Genome-Assembly
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
0
votes
0
replies
430
views
News: Environmental Metagenomics course
Environmental-Metagenomics
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
0
votes
0
replies
408
views
News: Course - GENERALIZED LINEAR MODELS in R
GLM R Generalised-Linear-Model
updated 11 months ago by 43k • written 13 months ago by ★ 2.5k
1,000 results • Page 4 of 20
Recent Votes
Comment: CombineGVCFs vs. MergeVcfs
Comment: Bioinformatics_where do i start
Answer: Bwa sampe - BGI
Comment: Where to find the homopolymer regions bed file for Hg002 genome?
A: Code golf: detecting homopolymers of length N in the (human) genome
Code golf: detecting homopolymers of length N in the (human) genome
Answer: WGCNA network from Adjacency or TOM matrix
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Recent Awards • All
Popular Question to predeus ★ 1.9k
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Comment: Bioinformatics_where do i start by BioinfGuru ★ 1.6k
The [biostars handbook][1] is well worth the money [1]: https://www.biostarhandbook.com/
Comment: Statistical Advice Needed for RNAseq Data Analysis by David • 0
Thank you @atpoint for your reply, but I think I didn't explain myself clearly. Initially, I compared my two datasets to their control and …
Comment: RNAseq of primary tumor and metastases in two different organ by BioinfGuru ★ 1.6k
Most advise to avoid For Loops in R (don't ask me why, unexpected results and behaviours, poor efficiency I think). I would use tidyverse f…
Comment: RNAseq of primary tumor and metastases in two different organ by BioinfGuru ★ 1.6k
P-values are not corrected for the multiple comparisons inherent in differential gene expression analysis. FDR (aka qvalue) is used for sel…
Comment: CombineGVCFs vs. MergeVcfs by Jeremy Leipzig 22k
in the supplemental materials of that UKBB paper they actually do mention MergeVcfs but it must be a typo
Comment: add INFO tag to vcf with bcftools by Javier • 0
Hi, im traying to do something similar, could you share the code to do what you describe. Thanks
Comment: Visualization of PROKKA Annotation Result? by Joe 21k
Colin's answer is essentially the right one I believe, but the more immediate consideration is: *what are you actually trying to show?* Mo…
Comment: Bioinformatics_where do i start by Pierre Lindenbaum 161k
https://www.biostars.org/p/9554614/ ; https://www.biostars.org/p/98983 ; https://www.biostars.org/p/9583727/ :https://www.biostars.org/p/4…
Answer: Bwa sampe - BGI by Pierre Lindenbaum 161k
bwa sampe produces unsorted SAM , not BAM. converting SAM to BAM will reduce the size sorting the BAM will reduce the size (you can …
Comment: Where to find the homopolymer regions bed file for Hg002 genome? by Bikram Kumar • 0
Hi! Should I delete the stack exchange post? I didn't know that cross posting is bad. [https://meta.stackoverflow.com/a/425789/5140632][1] …
Answer: Visualization of PROKKA Annotation Result? by colindaven 6.3k
You need a genome browser and you can probably use GBK or gff3 format. Here are some suggestions - I like JBrowse best, Artemis in its …
Comment: Where to find the homopolymer regions bed file for Hg002 genome? by Pierre Lindenbaum 161k
cross-posted https://bioinformatics.stackexchange.com/questions/22401
Comment: Tumour purity and ploidy estimation by bp22 ▴ 60
Hi Llyod98, This issue is still unresolved and I have not been able to find a tool or solution for purity and ploidy estimation when ther…
Comment: Ensembl gene id conversion by ATpoint 81k
Can you add some examples. It is hard to debug textual descriptions.
Answer: Which experiments generate Position Frequency Matrix? by ATpoint 81k
Yes, ChIP-seq or similar methods that assay the DNA binding of a protein. But for a reliable matrix you don't need one or two but many data…
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