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26 days ago by
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written 8.0 years ago by
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8 days ago by
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updated 18 days ago by
Ram
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written 6.6 years ago by
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News:
Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha processing events.
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written 6.7 years ago by
Chirag Nepal
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updated 12 days ago by
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written 6.7 years ago by
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updated 11 days ago by
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written 6.7 years ago by
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updated 8 days ago by
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written 6.7 years ago by
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updated 8 days ago by
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written 6.7 years ago by
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ENCODE Users' Meeting
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Recent Replies
Answer: Are mapped RefSeq, Ensembl, and UniProt IDs pointing to the same protein sequenc
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This is annoying for gene ids (HGNC, Ensembl, entrez, refseq) as well as proteins (Uniprot, refseq, ensembl).
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that's puzzling, it's the first time i see that error. Can you please retry with the `--stacktrace` option ? and show me the error trace.
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If your only option is the get a local desktop then read on ... (using core/shared compute resources should always be the first choice, if …
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> Any suggestions?
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You should use the `pivot_longer` function to transform your data into a format that ggplot2 likes. You'll want a column called `reads` and…
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Good to hear that you were able to fix the issue.
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I actually did not have JAVA_HOME set up. After setting it up and adding it to PATH:
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I'm not certain what you mean by "canonical form", but I'll assume for discussion that you want 1 orthologue from a database such as Unipro…
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No, `.tbi` file is just an index of the actual `vcf` file. If someone send that to you, you should ask for the `.vcf.gz` file together with…
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Thanks, @lchart, appreciate your quick response.
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You could compute some of the metrics used in this pre-print and compare them between multiple normalization methods:
https://www.biorxiv.…
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Hi Jared, thanks for your response. I wonder if there is a way to evaluate whether the normalization has been done correctly or not. I can …
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No. Converting a tbi to a vcf sounds like "Can you convert this 'Table of contents' to a whole book"
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No. An index (that is what tbi is) is just a table of content. You cannot reconstruct every page of a book with just the ToC at hand.
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