updated 29 days ago by
Ram
37k
•
written 7.7 years ago by
Bert Overduin
★
3.7k
3
votes
0
replies
2.8k
views
1
vote
1
reply
2.3k
views
10
votes
7
replies
1.9k
views
9
votes
6
replies
1.8k
views
1
vote
6
replies
587
views
updated 22 days ago by
synat.keam
▴
70
•
written 7 weeks ago by
carlopecoraro2
★
2.2k
1
vote
5
replies
585
views
updated 2 days ago by
Ram
37k
•
written 28 days ago by
carlopecoraro2
★
2.2k
0
votes
2
replies
538
views
1
vote
2
replies
413
views
26 days ago by
Samuel Lampa
★
1.3k
0
votes
1
reply
351
views
updated 2 days ago by
Ram
37k
•
written 28 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
312
views
1
vote
2
replies
263
views
12 days ago by
carlopecoraro2
★
2.2k
0
votes
1
reply
256
views
0
votes
0
replies
237
views
21 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
235
views
7 days ago by
carlopecoraro2
★
2.2k
1
vote
0
replies
231
views
20 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
222
views
22 days ago by
PeterC_NCBI
▴
180
0
votes
0
replies
207
views
updated 2 days ago by
Ram
37k
•
written 29 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
200
views
22 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
193
views
0
votes
0
replies
187
views
25 days ago by
David Langenberger
9.8k
0
votes
0
replies
176
views
27 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
169
views
12 days ago by
PeterC_NCBI
▴
180
0
votes
0
replies
165
views
9 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
165
views
updated 2 days ago by
Ram
37k
•
written 19 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
149
views
16 days ago by
mia.nahom
•
0
2
votes
0
replies
144
views
updated 2 days ago by
Ram
37k
•
written 8 days ago by
carlopecoraro2
★
2.2k
0
votes
2
replies
137
views
2 days ago by
PeterC_NCBI
▴
180
0
votes
0
replies
127
views
20 hours ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
99
views
updated 2 days ago by
Ram
37k
•
written 2 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
93
views
4 days ago by
carlopecoraro2
★
2.2k
0
votes
0
replies
92
views
10 days ago by
carlopecoraro2
★
2.2k
Recent Votes
Recent Locations •
All
India, 3 minutes ago
Bologna, 12 minutes ago
India, 28 minutes ago
Palau, 40 minutes ago
Tehran, 44 minutes ago
Israel, 53 minutes ago
India, 59 minutes ago
Recent Awards •
All
Popular Question to
Prakash
★
2.2k
Popular Question to
alslonik
▴
250
Popular Question to
atakanekiz
▴
310
Popular Question to
edus_bioinfo
▴
20
Popular Question to
storm1907
▴
30
Popular Question to
tarek.mohamed
▴
350
Recent Replies
Comment: Network analysis for two Factors
by
seidel
10k
Have you looked at any tutorials? Three are many out there. ([1][1], [2][2], [3][3], [etc.][4]) Do you have a preferred language?
[1]: …
Comment: ceres score in crispr screen
by
seidel
10k
Are you looking for moral support or technical support? Have you tried using it with an older version of R and bioconductor? (i.e. circa 20…
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
If you aren't willing to provide more precise information than this, sufficient for a reader to reproduce what you're seeing, I will delete…
Answer: Error while trying to install salmon
by
Chris
▴
10
Donwloading the package from conda (https://anaconda.org/conda-forge/boost/files?version=1.60.0) worked for me
wget https://anaconda.org/…
Answer: finding error to run edgeR, error in ploting MDS and after that in model matrix
by
Gordon Smyth
★
5.4k
First issue is that GEO series matrix files can't be read using `read.delim`.
Second issue is the data are from Agilent microarrays and …
Comment: PLINK2 selecting variants based on INFO score
by
m.c.roozen
•
0
I have tried that (the .pvar file contains the "1:10586" form as ID which I mentioned above) which leads to the same output as above, 0 var…
Answer: samtools markdup in Rsamtools
by
joe
▴
350
You can run any system command from inside R using `system()`. This works well if there is a single command without many dependencies. For …
Comment: samtools markdup in Rsamtools
by
Pierre Lindenbaum
152k
> But other solutions are also fine:
bash, nextflow, snakemake
Answer: samtools markdup in Rsamtools
by
ATpoint
68k
My honest opinion: Do processing of sequencing data on the standard command line with samtools. There is no need for the added complexity t…
Comment: To batch correct or analyse separately?
by
predeus
★
1.8k
Another great and up-to-date resource is this: https://www.sc-best-practices.org/preamble.html
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
The --exclude file must use the same variant IDs as your .pvar file. You should elaborate on what seemed to go wrong when you tried to arr…
Comment: phylogeny
by
炫
•
0
Hello, my problem is the same as yours, did you finally solve this problem?
Comment: Issue with hmmcalibrate during tutorial.
by
apcreyes29
•
0
If that's the case then I'll just proceed then. Thank you!
Answer: To batch correct or analyse separately?
by
ATpoint
68k
Instead of writing that all down I recommend to read the relevant part of the Bioconductor scRNA-seq book (OSCA) which covers the "how's" a…
Traffic: 725 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6