updated 6 days ago by
Ram
38k
•
written 7.8 years ago by
Deepak Tanwar
★
4.2k
6
votes
1
reply
1.7k
views
5
votes
3
replies
1.3k
views
5
votes
0
replies
1.5k
views
updated 3 days ago by
Ram
38k
•
written 7.7 years ago by
Sean Davis
26k
5
votes
0
replies
1.2k
views
updated 3 days ago by
Ram
38k
•
written 7.7 years ago by
Sean Davis
26k
4
votes
0
replies
753
views
updated 6 days ago by
Ram
38k
•
written 3.9 years ago by
stephens_sarah
▴
150
2
votes
2
replies
2.4k
views
updated 6 days ago by
Ram
38k
•
written 7.8 years ago by
Alex Reynolds
34k
2
votes
0
replies
2.2k
views
updated 6 days ago by
Ram
38k
•
written 7.7 years ago by
Antonio R. Franco
★
5.0k
1
vote
0
replies
785
views
1
vote
0
replies
149
views
0
votes
0
replies
953
views
0
votes
0
replies
457
views
0
votes
0
replies
125
views
0
votes
0
replies
65
views
0
votes
0
replies
1.3k
views
updated 5 days ago by
Ram
38k
•
written 6.3 years ago by
Persistent LABS
▴
750
0
votes
0
replies
33
views
3 hours ago by
bioinformatics.ca
•
0
0
votes
0
replies
92
views
0
votes
0
replies
143
views
0
votes
0
replies
103
views
updated 4 days ago by
Ram
38k
•
written 6 days ago by
carlopecoraro2
★
2.3k
Recent Votes
Recent Locations •
All
UCLA, 4 minutes ago
China, 6 minutes ago
Cambridge, MA, 8 minutes ago
Canada, 9 minutes ago
Canada, 10 minutes ago
United States, 13 minutes ago
Australia, 13 minutes ago
Recent Awards •
All
Popular Question to
samuel
▴
200
Popular Question to
Anand Rao
▴
550
Popular Question to
Alex S
▴
20
Recent Replies
Comment: split fasta file to train deep learning model
by
shenwei356
7.9k
Excluding sequences containing any letter not belonging to the 20 [amino acids letters](https://github.com/shenwei356/bio/blob/master/seq/a…
Comment: split fasta file to train deep learning model
by
pinheirofabiano
▴
10
@shenwei356, thank you very much for your help, perfect!
But now I realized that some fasta sequences contain the letter "B", which is ou…
Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
by
Mensur Dlakic
★
23k
I think it depends on the speed of your local disks and the memory amount. On a single node, breaking up the database doesn't sound like a …
Comment: Sample size for population genetics
by
Jeremy Leipzig
21k
Other populations just make the model harder to generalize, not easier.
Comment: Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum?
by
Vincent Laufer
★
2.5k
i think there is some of that - my most upvoted comment of all time was a dismissive comment i made while extremely tired. for context i ha…
Comment: Molecular biologist / clinical pharmacologist (f/m/d)
by
Jeremy
▴
770
Is this job on site in Vienna or remote?
Comment: smoothing or binning bigWig file
by
rls_08
▴
40
if you use bigwigCompare , that would not create a sliding window, but instead, it will output the mean for each bin, according to the -bin…
Comment: Sample size for population genetics
by
zimmer.schweiz
•
0
Thank you so much for your answer. For common polygenic diseases, would it make sense to increase the number of populations sampled, in ord…
Answer: Sample size for population genetics
by
Jeremy Leipzig
21k
For a rare penetrant monogenic disease? A few cases.
For a common polygenic disease or trait? 500k-10M
Answer: using GRanges metadata to constrain overlap searches between objects
by
seidel
11k
Rather than do all overlaps all the time for all samples, why not restrict the data by sample when you can. The code below works about 4 ti…
Comment: How to get gene from PSIBLAST resuts
by
Tom
•
0
Hello, thank you for your answer,
I have a question, Why the information from the GFF file and from the feature table is different? I see …
Comment: 1000 genomes hg38 with dbSNP rsid
by
Ram
38k
It should be pretty straightforward. Just to save you some pain, run these on the 1000g VCF once you download it:
1. `vt decompose -s` to …
Comment: 1000 genomes hg38 with dbSNP rsid
by
Vince
▴
150
Yeah, I had some hope that I wouldn't need to mess with doing this ...
Answer: counting the unmapped reads
by
chemkhi.ali13
•
0
> Hi all,
>
> I have a sam file, my supervisor asked me to count the number of
> unmapped reads, which command I should use?
>
> sam…
Traffic: 1697 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6