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895 results • Page
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News:
BLAST FASTA Files Will No Longer Be Available on the FTP Site Effective April 2024
NCBI
BLAST
11 weeks ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
228
views
News:
EMBL-EBI Training | Systems biology: from large datasets to biological insight
systems
12 weeks ago by
EMBL Events
▴ 10
0
votes
0
replies
195
views
News:
Online course - Sex Chromosome Evolution
Evolution
Genomics
Sex-Chromosome
updated 12 weeks ago by
Ram
43k • written 12 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
794
views
News:
LAST CALL: Online Course - A Practical Introduction to NGS Data Analysis (February 28 - March 1, 2024)
NGS
Online-Workshop
updated 3 months ago by
Ram
43k • written 3 months ago by
David Langenberger
11k
7
votes
2
replies
1.1k
views
News:
NGS Data Analysis Workshops 2024
scRNA-seq
dna-seq
rna-seq
nextflow
3 months ago by
David Langenberger
11k
0
votes
0
replies
229
views
News:
Online course: Generalized Additive Models (GAMs) in R
R
Statistics
Gams
3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
254
views
News:
Online course - Introduction to Python for biologists
Python
Programming
NGSData
3 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
194
views
News:
Online course - Introduction to Machine Learning in R for omics data
R
Omics
MachineLearning
StatisticalLearning
3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
180
views
News:
Online course - Flow cytometry data analysis with R/Bioconductor
R
Flow-Cytometry
Bioconductor
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
304
views
News:
Reminder: NCBI ClinVar XML update to accommodate somatic variants coming Jan 29, 2024
SNP
XML
ClinVar
NCBI
3 months ago by
PeterC_NCBI
▴ 410
4
votes
0
replies
194
views
News:
Transform Your Research with Our NGS Data Analysis Online Course!
DNAseq
NGS
Biologists
OnlineCourse
RNAseq
3 months ago by
David Langenberger
11k
0
votes
0
replies
236
views
News:
3rd edition of the Winter School in Bioinformatics - Online February 26 - March 1
genomics
reproducibility
phylogenomics
transcriptomics
3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
571
views
News:
course - Reproducibility in Bioinformatics
Docker
Reproducibility
written 13 months ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
362
views
News:
Online Course - Genomic Prediction
Genomic-Prediction
Selective-Breeding
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
264
views
News:
Flow cytometry data analysis with R/Bioconductor course
FlowCytometry
R
Bioconductor
4 months ago by
carlopecoraro2
★ 2.5k
2
votes
2
replies
509
views
News:
Unix and Shell Scripting for Bioinformatics course
Bash
Unix
Shell-Scripting
4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
313
views
News:
Bayesian Data Analysis in R course
R
Bayesian-Statistics
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
322
views
News:
Practical Hands-On Introduction to R course
R
Tidyverse
Data-Analysis
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
285
views
News:
Landscape Genomics course at the EPFL in Lausanne, Switzerland
genomics
Landscape-Genomics
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
276
views
News:
New version of ElasticBLAST (1.2.0) available from NCBI
ElasticBLAST
NCBI
BLAST
4 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
270
views
News:
Course. - Gene Set Enrichment Analysis in R/Bioconductor - ONLINE, 22-25 January
R
Gene-Set-Enrichment-Analysis
GSEA
Bioconductor
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
284
views
News:
University of Connecticut Single Cell RNA-seq Workshop December 12-15, 2023
expression
singlecell
rnaseq
4 months ago by
mia.nahom
▴ 10
0
votes
0
replies
269
views
News:
Online course: Introduction to Python, February 12th-March 11th, 2024
python
courses
4 months ago by
Sole
• 0
0
votes
1
reply
364
views
News:
Course: Genome Assembly and Annotation
Biodiversity
Genome-Assembly
Genome-Annotation
Long-reads
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
342
views
News:
GWAS course
R
GWAS
updated 4 months ago by
Ram
43k • written 4 months ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
292
views
News:
NCBI BLAST+ 2.2.15 now available for download
NCBI
Taxonomy
BLAST
5 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
294
views
News:
Course - Introduction to R Shiny
R
Data-Visualisation
Shiny
updated 4 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
270
views
News:
Online expert taught RNA-Seq workshop
workshop
5 months ago by
fturner
▴ 10
0
votes
0
replies
308
views
News:
Course - RNAseq in non-model organisms
Pacbio
RNA-seq
Nanopore
updated 4 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
326
views
News:
Next-Generation Sequencing Data Analysis: A Practical Introduction (Nov 29 – Dec 1 in Munich, Germany)
RNAseq
DNAseq
NGS
Workshop
5 months ago by
Lars
★ 1.0k
0
votes
0
replies
315
views
News:
Course - Computational Tumor Evolution
Tumor-Evolution
Cancer-Genomics
updated 4 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
3
replies
1.4k
views
News:
:: FINAL CALL :: A Practical Introduction to NGS Data Analysis (Nov 29 - Dec 1, 2023 in Munich, Germany) - only 2 seats left
DNA-Seq
NGS
RNA-Seq
Workshop
5 months ago by
David Langenberger
11k
0
votes
0
replies
348
views
News:
Course: Genome Assembly using Oxford Nanopore Sequencing
Genome-Assembly
Nanopore
updated 4 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
307
views
News:
Genemod - Lab Management Software
lab-management-software
research
updated 5 months ago by
Ram
43k • written 5 months ago by
Genemod
• 0
1
vote
0
replies
310
views
News:
course - Advanced Python Programming
Python-Programming
updated 5 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
4
votes
2
replies
2.9k
views
News:
New ebook: From cell line to Command line to learn computational biology
unix
snakemake
computational-biology
RNA-seq
5 months ago by
Ming Tommy Tang
★ 3.9k
0
votes
0
replies
384
views
News:
GWAS course
R
GWAS
updated 5 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
328
views
News:
Course - Introduction to Bayesian Data Analysis
R
Statistics
Bayesian
Regression-Modeling
updated 4 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
535
views
News:
gnomAD v4 released
gnomad
5 months ago by
Pierre Lindenbaum
161k
0
votes
0
replies
326
views
News:
Course - Introduction to Machine Learning in R
R
Statistical-Learning
Omics
Machine-Learning
updated 5 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
408
views
News:
Spatial Omics and Multiplexed Image Analysis course
Spatial-Omics
Multiplexed-Image-Analysis
updated 5 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
346
views
News:
Virtual de novo RNA-seq (transcriptomics) Workshop: November 13-16, 2023
workshop
RNA-seq
transcriptomics
updated 5 months ago by
Ram
43k • written 5 months ago by
mia.nahom
▴ 10
1
vote
0
replies
385
views
News:
course - Comparative Genomics
Comparative-Genomics
updated 5 months ago by
Ram
43k • written 5 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
398
views
News:
Online course Python Machine Learning in Biology, November 16, 2023
machine-learning
python
course
updated 5 months ago by
Ram
43k • written 5 months ago by
Sole
• 0
122
votes
44
replies
11k
views
24 follow
News:
Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
meta
biostars
updated 5 months ago by
Ram
43k • written 11.4 years ago by
Istvan Albert
100k
0
votes
0
replies
376
views
News:
Bioinformatics Phoenix
web-server
updated 5 months ago by
Ram
43k • written 6 months ago by
garyargraves
• 0
1
vote
0
replies
316
views
News:
Course - Developing R/Bioconductor Packages for Genomics
R
package-development
Genomics
Bioconductor
updated 6 months ago by
Ram
43k • written 6 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
309
views
News:
Course -Metabarcoding in Microbial Ecology
R
Qiime2
Microbial-Ecology
Metabarcoding
updated 6 months ago by
Ram
43k • written 6 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
350
views
News:
Become a Bioinformatics Pro: Easy Understanding Starts Here
Structural-Bioinformatics
updated 6 months ago by
Ram
43k • written 6 months ago by
sriv.reetesh
• 0
0
votes
0
replies
368
views
News:
Course - Flow Cytometry analysis with R/Bioconductor
R
Flow-Cytometry
Bioconductor
updated 6 months ago by
Ram
43k • written 6 months ago by
carlopecoraro2
★ 2.5k
895 results • Page
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bcftools multiple commands
bcftools pipe generated file from first command with second
C: How to setup a Summarized Experiment
A: How to download genome assemblies from NCBI with a list of GCA identifiers?
what's the genomic location and name of gene responsible for orange and black patches in calico cats
Comment: featureCounts --primary tag counting uniquely mapped reads and excludes multi-ma
Answer: Duplicate marking, read names, and the SRA
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Answer: MEGA Analysis Issue on High-Performance Computer
by
Mensur Dlakic
★ 27k
> I have ensured that I am using the latest version of MEGA and that other applications are not consuming excessive resources during the an…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★ 1.7k
Some of us are still learning and fall foul to knowledge limitation fairly regularly. Luckily we have people to put us in our place.
Answer: Running blastp with BLAST+ 2.15.0 against custom database; need to identify hits
by
GenoMax
141k
> I know that I should be able to collect protein sequences from the blastp results into a file, but I do not know how to do this. You c…
Comment: how to find genes that are significantly expressed in brain cortex samples
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rheab1230
▴ 140
I got the normalized gene count from gtex portal. they use inverse quantile normalization
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
Matthias Zepper
4.5k
It is not entirely off, but evidently also not correct. Melanin biosynthesis is a multistep process, that indeed prominently involves the…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
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Ram
43k
> so a single Rscript could utilise multiple environments and versions How is that sane, let alone "better"? Also, why use `snap` for curl…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Normalized how?
Comment: Duplicate marking, read names, and the SRA
by
GenoMax
141k
With public data one has to work with what is there. If the information about position is absent then only thing that could be done is to l…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★ 1.7k
Or better yet. To have an R package that allows access to conda environments via "conda list env" so that environments can be switched with…
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
GenoMax
141k
If GPT is right then it says that: > The specific gene responsible for the orange and non-orange (black or > gray) fur colors in cats is t…
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
Jean-Karim Heriche
27k
As far as I know the Orange locus hasn't been mapped to a gene. Maybe this paper will help in narrowing the search: https://www.ncbi.nlm.ni…
Comment: Duplicate marking, read names, and the SRA
by
Luka
• 0
>Curios if there a reference for this? [Apparently it's not deprecated yet][1], but will be soon and the SRA intends for it to be at some …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
I prefer RStudio for new projects as well. The moment I need versions though, RStudio becomes a burden. I wish one could launch RStudio fro…
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
GenoMax
141k
According to ChatGPT: The gene responsible for the orange and black patches of fur in calico cats (and tortoiseshell cats) is the X-linked …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★ 1.7k
Certainly true. Switching versions is way simpler that way, at the cost of the familiarity of the Rstudio IDE - especially if the code is w…
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