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899 results • Page
4 of 18
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News:
FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS
RNA-Seq
Workshop
11 weeks ago by
David Langenberger
11k
1
vote
1
reply
1.7k
views
News:
2nd Berlin Summer School in NGS Data Analysis 2018
DNA-Seq
Workshop
NGS
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
David Langenberger
11k
0
votes
1
reply
611
views
News:
Bioinformatics Training Program
next-gen-sequencing
genome
RNA-Seq
updated 10 months ago by
Ram
43k • written 4.8 years ago by
guddi
• 0
3
votes
1
reply
1.4k
views
News:
GATK returns to a fully open-source license
gatk
updated 11 months ago by
Ram
43k • written 6.9 years ago by
Istvan Albert
100k
0
votes
1
reply
1.5k
views
News:
Live Webinar on RNA-Seq Data Analysis on 28 Feb 2018
splice-variants
RNA-Seq
alignment
Strand-NGS
updated 11 months ago by
Ram
43k • written 6.2 years ago by
Genomics
▴ 70
2
votes
1
reply
874
views
News:
Gene set enrichment and pathway analysis in HT data
next-gen-sequencing
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
648
views
News:
International Conference on Renewable & Non-Renewable Energy
next-gen
updated 11 months ago by
Ram
43k • written 5.9 years ago by
energy
• 0
0
votes
1
reply
1.8k
views
News:
Spatio-temporal Transcriptome of LncRNAs in Human Brain
Parkinson
lncRNA
Alzheimer
brain
transcriptome
updated 11 months ago by
Ram
43k • written 6.8 years ago by
lsp03yjh
▴ 860
0
votes
1
reply
1.4k
views
News:
Webinar on Leukocyte immunobiology by Dr. Mario Deng, Professor of Medicine, UCLA on 9 Aug 2017, 8am PST
UCLA
transcriptome-analysis
RNA-Seq
Strand-NGS
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Genomics
▴ 70
0
votes
1
reply
370
views
News:
Online Course - Genomic Prediction
Genomic-Prediction
Selective-Breeding
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
1
vote
1
reply
1.7k
views
News:
Bioinformatics for Beginners @NIH, (Bethesda, MD, USA) Feb 13 - 16, 2018
beginners
training
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
1
vote
1
reply
934
views
News:
Webinar on Extensive Assessment of Gene Fusion Detection, Prioritization, Annotation and Characterization on 11 March 2020
detection
webinar
RNA-Seq
gene-fusion
updated 10 months ago by
Ram
43k • written 4.2 years ago by
Strand NGS
▴ 40
0
votes
1
reply
789
views
News:
Advanced R Programming Course
R
updated 11 months ago by
Ram
43k • written 6.0 years ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
1.1k
views
News:
New Alexa skill provides voice-based access to Protein Data Bank data
protein-structure
pdb
updated 11 months ago by
Ram
43k • written 6.5 years ago by
gregorybquinn
• 0
0
votes
1
reply
1.6k
views
News:
Course: RADseq data analysis in Berlin (4-8/12/17). LAST CALL
STACKs
RADseq
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
2
votes
1
reply
671
views
News:
NGS & Microarray Custom Data Analysis Training Program
next-gen-sequencing
RNA-Seq
ChIP-Seq
updated 10 months ago by
Ram
43k • written 4.8 years ago by
guddi
• 0
3
votes
1
reply
1.2k
views
News:
UniProt: Change of FT and CC section in UniProtKB text format
uniprot
protein
updated 10 months ago by
Ram
43k • written 4.6 years ago by
Elisabeth Gasteiger
★ 2.4k
1
vote
0
replies
321
views
News:
Course - Developing R/Bioconductor Packages for Genomics
R
package-development
Genomics
Bioconductor
updated 6 months ago by
Ram
43k • written 6 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.4k
views
News:
WORKSHOP - Landscape genetic data analysis using R
genome
R
RNA-Seq
updated 11 months ago by
Ram
43k • written 7.1 years ago by
oliverhooker
▴ 110
0
votes
0
replies
867
views
News:
OmicsLogic Online Bioinformatics Program (March 2019) has started
genome
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.1 years ago by
elia.brodsky
▴ 340
0
votes
0
replies
1.0k
views
News:
Population genomics course (Berlin, May 14-18)
genome
next-gen
R
SNP
updated 11 months ago by
Ram
43k • written 6.1 years ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
1.3k
views
News:
Nextflow Training Course
Pipeline
Workflow
NEXTFLOW
updated 10 months ago by
Ram
43k • written 4.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.2k
views
News:
Comparative Genomics Workshop (Berlin, 1-5 October 2018). Last Call
next-gen
PACBIO
updated 11 months ago by
Ram
43k • written 5.7 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
591
views
News:
The precisionFDA BioCompute Object App-a-thon submission period ends in 1 week!
app-a-thon
biocompute
precisionFDA
updated 10 months ago by
Ram
43k • written 4.5 years ago by
hollystephens723
▴ 70
4
votes
0
replies
1.2k
views
News:
Workshop for genomic data visualization and interpretation
R
RNA-Seq
ggplot2
genomics
updated 11 months ago by
Ram
43k • written 5.4 years ago by
Malachi Griffith
19k
0
votes
0
replies
1.3k
views
News:
Training in Creating Plots, Graphs and Maps using R @ NIH, USA, Mar 6 - 9, 2018
R
plots
maps
graphs
updated 11 months ago by
Ram
43k • written 6.2 years ago by
AABI
▴ 140
2
votes
0
replies
799
views
News:
Course: RNA-seq Analyses in non-model organisms (Berlin 11-15 November 2019)
gene
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 4.9 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
943
views
News:
Comparative Genomics Workshop (Berlin, 1-5 October 2018)
snp
assembly
SV
updated 11 months ago by
Ram
43k • written 5.6 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.5k
views
News:
Course: Advanced Python for Biologists. Berlin (Germany). 13-17 November 2017
Python
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
243
views
News:
3rd edition of the Winter School in Bioinformatics - Online February 26 - March 1
genomics
reproducibility
phylogenomics
transcriptomics
3 months ago by
carlopecoraro2
★ 2.5k
5
votes
0
replies
991
views
News:
Free online Ensembl REST API training
perl
rest-api
jupyter
python
ensembl
updated 11 months ago by
Ram
43k • written 5.4 years ago by
Emily
23k
0
votes
0
replies
1.0k
views
News:
Call For Papers - PSB 2019 Special session on Biological Data Privacy
paper
updated 11 months ago by
Ram
43k • written 6.0 years ago by
ozgun.harmanci
• 0
1
vote
0
replies
856
views
News:
hackseqRNA: Computational RNA hackathon, Vancouver BC
hackathon
RNA
updated 10 months ago by
Ram
43k • written 4.2 years ago by
ababaian
▴ 50
0
votes
0
replies
1.7k
views
News:
Metagenomics Workshop in October 2017 in Frankfurt, Germany
NGS
workshop
metagenomics
updated 11 months ago by
Ram
43k • written 6.8 years ago by
David Langenberger
11k
0
votes
0
replies
2.0k
views
News:
Metagenomics course. 9-13 April 2018
genome
R
Metagenomics
updated 11 months ago by
Ram
43k • written 6.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.0k
views
News:
Epigenomics Workshop in Berlin (28th May-1st June 2018)
RNA-Seq
ChIP-Seq
ATAC-seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.6k
views
News:
Registration deadline for 2017 CBW bioinformatics workshops is fast approaching
SNP
ChIP-Seq
Assembly
RNA-Seq
R
updated 11 months ago by
Ram
43k • written 7.1 years ago by
meyer.ann
▴ 30
0
votes
0
replies
698
views
News:
Training in Advanced Transcriptomics (RNA-Seq) Analysis
Transcriptome-analysis
RNA-Seq
Biomedical
next-gen
updated 10 months ago by
Ram
43k • written 4.2 years ago by
AABI
▴ 140
0
votes
0
replies
1.4k
views
News:
Hands-on machine learning workshop for biomedical data
genome
machine-learning
updated 11 months ago by
Ram
43k • written 5.8 years ago by
sahil
▴ 10
0
votes
0
replies
2.1k
views
News:
Workshop: RADseq data analysis in Berlin
next-gen
genome
SNP
updated 11 months ago by
Ram
43k • written 7.0 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.5k
views
News:
BioVM 18.04 - call for testing and feedback
ubuntu
virtual-machine
linux
biovm
updated 11 months ago by
Ram
43k • written 6.0 years ago by
vimalkvn
▴ 320
0
votes
0
replies
439
views
News:
Online course: Easily analyze single cell RNA-seq data with Cellenics®, a user-friendly web-based platform
scRNA-seq
training
single-cell-RNA-seq
updated 7 months ago by
Ram
43k • written 7 months ago by
Sara
• 0
1
vote
0
replies
503
views
News:
Course - Introduction to Deep Learning for biologists
Genomics
Deep-Learning
Python
NGS
updated 10 months ago by
Ram
43k • written 10 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
649
views
News:
precisionFDA is launching the Truth Challenge V2: Calling Variants from Short and Long Reads in Difficult-to-Map Regions on May 1st!
gene
genome
updated 10 months ago by
Ram
43k • written 4.0 years ago by
stephens_sarah
▴ 150
0
votes
0
replies
671
views
News:
Gene Ontology Virtual User Meeting
Ontology
GO
Enrichment
Gene-Ontology
updated 10 months ago by
Ram
43k • written 4.0 years ago by
laurent.albou
• 0
0
votes
0
replies
352
views
News:
Course: Data Manipulation and Visualisation with Python
Python
Data-Visualization
Data-Manipulation
updated 7 months ago by
Ram
43k • written 7 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
783
views
News:
Do you want to improve your programming skills?
Programming
Unix
Bash
Python
updated 10 months ago by
Ram
43k • written 4.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
854
views
News:
Comparative Genomics (Berlin, 1-5 October 2018)
Assembly
SNP
alignment
SV
updated 11 months ago by
Ram
43k • written 5.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.3k
views
News:
Programming for Biomedical Researchers @NIH, USA, Nov 28-Dec 1, 2017
reseachers
program
training
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
0
votes
0
replies
175
views
News:
NGS Data Analysis Courses for Absolute Beginners
NGS
DNAseq
RNAseq
singlecellsequencing
DataAnalysis
10 weeks ago by
David Langenberger
11k
899 results • Page
4 of 18
Recent Votes
Detecting somatic variants in non-tumor tissue without normals
Answer: Sequence read length shorter than flow cell specification
Answer: Sequence read length shorter than flow cell specification
Comment: Why gatk VariantAnnotator required bam and coverage files
A: Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
Answer: How do I get the 3bp sequence on either side of a co-ordinate
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Recent Replies
Comment: Why gatk VariantAnnotator required bam and coverage files
by
QX
• 0
thank you!
Comment: Treatment VS Control in Single Cell RNAseq analysis
by
kilcdincer
▴ 10
Hello, I have more or less same experimental setting and was wondering how you proceeded with your analysis? Can I reach its GitHub reposit…
Comment: BLAST using both nucleotides and taxonomic local databases
by
GenoMax
141k
> I ask this as some BLAST command fields as scinames or sblastnames do not give any output with a classic nt BLAST If that information is…
Answer: BLAST using both nucleotides and taxonomic local databases
by
5heikki
11k
This has been discussed [many times][1] [1]: https://www.biostars.org/p/76551/
Answer: why renaming Idents in Seurat object doesn't work?
by
Bioinfotec
▴ 10
I think when you give indent to seuObj : Idents(seuObj) <- 'RNA_snn_res.0.1' You may wrongly assign other value to it such as …
Answer: ScRNAseq-How to correctly choose cell type marker genes
by
Bioinfotec
▴ 10
In fact, there is no gold standard for cell type annotation. To achieve correct cell type classification, you can combine the two methos. F…
Answer: ScRNA data question
by
Bioinfotec
▴ 10
In violin plot, a dot represents a cell. Actually, the straight lines you see in your infected image just means these cells have the same e…
Comment: Sequence read length shorter than flow cell specification
by
GenoMax
141k
> the have sent data with different sequencing read lengths: 55bp pair ended and 80bp single ended If they sent data that is not what you…
Comment: How to know synonymous and non-synonymous SNPs from transcriptome sequencing
by
rohitsatyam102
▴ 840
I have some off-the-chart dN/dS values for few genes (>20) when using your script on VCF obtained from a 20K plasmodium genomes (pf7K). | …
Answer: Sequence read length shorter than flow cell specification
by
ATpoint
82k
It is the amount of reagent in the kit that determines read length. Sometimes index cycle reagents are allocated to R1/R2 or they used anot…
Comment: Why gatk VariantAnnotator required bam and coverage files
by
Pierre Lindenbaum
161k
you don't need the bam file https://gatk.broadinstitute.org/hc/en-us/articles/13832654601755-VariantAnnotator : VariantAnnotator …
Comment: GAPIT p-value significance threshold
by
ginellegrenier
• 0
Hi, I was wondering if you have found a solution to this? Thanks!
Comment: PCA plot
by
jkim
▴ 170
cross posted in bioconductor. [https://support.bioconductor.org/p/9157968/][1] [1]: https://support.bioconductor.org/p/9157968/
Comment: ScRNA data question
by
bk11
★ 2.3k
Which normalization method did you use for your data? I am guessing you had used SCTransform normalization for your data. Can you plot usin…
Comment: How to make a TSS enrichment plot in ATAC-seq analysis?
by
sp
• 0
Hi Dan, I was wondering if you found out how to make the same graph with NFR and NBR regions with different curves. I was able to recreate…
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