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897 results • Page 1 of 18
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 3 months ago by 2.7k • written 7.4 years ago by 100k
2
votes
0
replies
64
views
News: Interested in Spatial Omics?
Bioconductor Spatial-Omics Spatial-Transcriptomics
updated 11 hours ago by 43k • written 12 hours ago by ★ 2.5k
0
votes
0
replies
75
views
News: Online course: DNA methylation
Pacbio Nanopore DnaMethylation Evolution
1 day ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
125
views
News: upcoming online statistical courses
Statistics R Data-Analysis
updated 2 days ago by 43k • written 3 days ago by ★ 2.5k
0
votes
0
replies
183
views
News: Online course: Meta-analysis in R
Meta-Analysis Statistics R
updated 5 days ago by 43k • written 5 days ago by ★ 2.5k
0
votes
0
replies
168
views
News: Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo Individual-Based-Models Agent-Based-Models
updated 5 days ago by 43k • written 5 days ago by ★ 2.5k
0
votes
0
replies
168
views
News: Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop RNA-seq nextflow DNA-seq
updated 7 days ago by 43k • written 7 days ago by 11k
0
votes
0
replies
138
views
News: Deadline Approaching: PETs for Public Health Challenge
privacy public-health-challenge
updated 8 days ago by 43k • written 8 days ago by ▴ 380
0
votes
0
replies
171
views
News: Online course: Network Analysis in R
NetworkAnalyis R
9 days ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
177
views
News: Online course: Meta-analysis in R
Meta-Analysis R
updated 12 days ago by 43k • written 12 days ago by ★ 2.5k
1
vote
0
replies
123
views
News: Online Live Course: Introduction to Machine Learning in R
Rstats TScourses Rlang Rproject
updated 12 days ago by 43k • written 12 days ago by ▴ 70
2
votes
0
replies
115
views
News: Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM Rlang Rstats Rproject
updated 12 days ago by 43k • written 12 days ago by ▴ 70
2
votes
0
replies
114
views
News: Online Course Introduction to Network Analysis and Modelling
Python Network-Analysis
updated 12 days ago by 43k • written 12 days ago by ▴ 70
2
votes
0
replies
107
views
News: Course Functional Programming with R
Rstats TScourses Rproject KeepLearning Rlang
13 days ago by Transmitting Science communication ▴ 70
12
votes
2
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435
views
News: 8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop RNA-Seq DNA-Seq Illumina
13 days ago by David Langenberger 11k
2
votes
0
replies
111
views
News: Online course: Genome Annotation
Genome-Assembly RNA-seq Genome-Annotation
updated 14 days ago by 43k • written 14 days ago by ★ 2.5k
0
votes
0
replies
113
views
News: Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics vegan R
updated 15 days ago by 43k • written 15 days ago by ★ 2.5k
1
vote
0
replies
168
views
News: Landscape Genomics course in Switzerland
LFMM Landscape-Genomics Sambada R Local-Adaptation
updated 15 days ago by 43k • written 17 days ago by ★ 2.5k
8
votes
2
replies
761
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
18 days ago by David Langenberger 11k
0
votes
0
replies
137
views
News: Online course: Food Traceability Using Genomic Tools
Nanopore Genomic-Tools Illumina Food-Traceability
updated 20 days ago by 43k • written 20 days ago by ★ 2.5k
0
votes
0
replies
141
views
News: Online course: Eukaryotic Metabarcoding
Metabarcoding Biodiversity R eDNA
22 days ago by carlopecoraro2 ★ 2.5k
3
votes
2
replies
550
views
News: Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling endocrinology ML systems-biology machine-learning
25 days ago by Johannes W. Dietrich • 0
0
votes
0
replies
195
views
News: Online course: Reproducibility in Bioinformatics
Singularity Version-Control Docker Containers
updated 26 days ago by 43k • written 26 days ago by ★ 2.5k
0
votes
0
replies
159
views
News: Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic Bacterial-Genomics Pangenomics
updated 26 days ago by 43k • written 26 days ago by ★ 2.5k
0
votes
0
replies
159
views
News: Online course: Introduction to GWAS
GWAS Imputation StatisticalPower
4 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
157
views
News: Online course: Adaptation Genomics
StructuralVariants Selection AdaptationGenomics PopulationStructure
5 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
147
views
News: Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics Pangenomics
5 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
227
views
News: Online course on Genome Assembly and Annotation (1 seat left)
Galaxy GenomeAssembly GenomeAnnotation
5 weeks ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
164
views
News: NCBI's ClinVar now accepting somatic variation data
variation NCBI somatic-variants ClinVar
5 weeks ago by PeterC_NCBI ▴ 410
1
vote
1
reply
267
views
News: EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 5 weeks ago by • 0 • written 10 weeks ago by ▴ 10
1
vote
0
replies
188
views
News: Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow pipeline workshop
6 weeks ago by David Langenberger 11k
0
votes
0
replies
149
views
News: Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly Galaxy Genome-Annotation
updated 6 weeks ago by 43k • written 6 weeks ago by ★ 2.5k
0
votes
0
replies
145
views
News: Call for abstract: Quest for Orthologs meeting in Montreal
conference phylogeny comparativegenomics orthology evolution
6 weeks ago by sina.majidian ▴ 20
1
vote
0
replies
150
views
News: shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability terminal bash
7 weeks ago by David Langenberger 11k
1
vote
1
reply
189
views
News: Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser IGB
updated 7 weeks ago by 43k • written 7 weeks ago by • 0
0
votes
0
replies
180
views
News: Online course: Network Analysis in Systems Biology with R/Bioconductor
R RNA-seq Network-Analysis Bioconductor Systems-Biology
updated 7 weeks ago by 43k • written 7 weeks ago by ★ 2.5k
0
votes
0
replies
209
views
News: The 2024 Canadian Bioinformatics Workshops are here!
CBW workshop training
7 weeks ago by bioinformatics.ca • 0
0
votes
0
replies
169
views
News: Live online course Data Manipulation with R Tidyverse, 3 and 5 of April
R manipulation tidyverse data
8 weeks ago by Sole • 0
0
votes
0
replies
189
views
News: Online course: Reproducibility in Bioinformatics
Docker Singularity WorkflowManagementSystems Reproducibility
8 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
241
views
News: Online course: Genome Assembly Using Oxford Nanopore Sequencing - 4 seats remaining
GenomeAssembly Nanopore longreads
8 weeks ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
224
views
News: Webinar about scRNA-seq cell type prediction
scRNAseq
updated 8 weeks ago by 141k • written 8 weeks ago by • 0
0
votes
0
replies
233
views
News: Online course: Spatial Omics in R/Bioconductor
R Spatial-Omics Bioconductor tidyverse transcriptomics
updated 8 weeks ago by 43k • written 8 weeks ago by ★ 2.5k
0
votes
0
replies
199
views
News: Online course: Model-Based Demographic Inference from Population Genomics
Demographic-Inference Population-Genomics Demographic-Models
updated 9 weeks ago by 43k • written 9 weeks ago by ★ 2.5k
0
votes
0
replies
170
views
News: Online course: R/Bioconductor for Mass Spectrometry and Proteomics
R Proteomics Bioconductor Mass-Spectrometry
updated 9 weeks ago by 43k • written 9 weeks ago by ★ 2.5k
0
votes
0
replies
179
views
News: Virtual Workshops with the UConn Computational Biology Core
Workshop genomics
updated 10 weeks ago by 141k • written 10 weeks ago by ▴ 10
0
votes
0
replies
172
views
News: NGS Data Analysis Courses for Absolute Beginners
NGS DNAseq RNAseq singlecellsequencing DataAnalysis
10 weeks ago by David Langenberger 11k
0
votes
0
replies
188
views
News: Online course: Genome Assembly and Annotation
Annotation Genome-Assembly Nanopore Pacbio
updated 10 weeks ago by 43k • written 10 weeks ago by ★ 2.5k
0
votes
0
replies
168
views
News: Online course: Computation Tumor Evolution
R Cancer-Genomics Tumor-Evolution Genomics
updated 10 weeks ago by 43k • written 10 weeks ago by ★ 2.5k
0
votes
0
replies
166
views
News: Course live online Intro Bayesian Analyses, March 4-8, 2024
R python bayesian
11 weeks ago by Sole • 0
0
votes
1
reply
934
views
News: FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS RNA-Seq Workshop
11 weeks ago by David Langenberger 11k
897 results • Page 1 of 18
Recent Votes
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
Comment: TCGA2STAT Error: Firehose connection
Answer: HaplotypeCaller - only SNPs
Comment: Bwa sampe - BGI
Comment: Redirection of Duplicate PMIDs
Answer: Redirection of Duplicate PMIDs
A: Should I Remove All Positions Containing A Gap In A Multiple Alignment Prior To
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Recent Replies
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks? by HyperEvo • 0
Ok, thank you so much~
Comment: GTF file for Rhinolophus sinicus by GenoMax 141k
I was able to get the GTF file. I tried the fasta genome and it seemed to work but I did not complete the download. If you choose to ignore…
Comment: some error in building kraken2 database by Art1ess • 0
I have 2 files output, no error logs... the .kreport file: 100.00 160136511 160136511 U 0 unclassified head .res…
Comment: TCGA2STAT Error: Firehose connection by LauferVA 4.2k
agree. from a data-centric (rather than software centric) standpoint, it shouldn't be hard to get the TCGA data you are looking for from o…
Comment: Redirection of Duplicate PMIDs by LauferVA 4.2k
yep. in this case id definitely start with the grant numbers themselves as others have indicated. i did not recommend this before due to un…
Comment: GTF file for Rhinolophus sinicus by atowns21 • 0
This download doesn't seem to work for me. There is a message on the website saying "Warning: contaminated. Status: RefSeq GCF_001888835.1 …
Answer: HaplotypeCaller - only SNPs by Pierre Lindenbaum 161k
Filter the vcf dowstream after haplotypecaller using bcftools or gatk variantfiltration
Answer: Gene set enrichment analysis differences between 2020 and 2024 by geneontologyhelp ▴ 360
We have releases about monthly in order to keep our data accurate and reflect current understanding. In 4 years, there have been about 40 r…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by GenoMax 141k
Let us know when you find out. Would be a useful thing to know what the data looks like.
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by atowns21 • 0
Yes, that is a very good idea. Thanks for the help!
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by GenoMax 141k
Only thing would be to try them out. See if you can detect them in the data you have. You could also simply look for unique representativ…
Comment: How to calculate identity percentage between proteins contained in a FASTA file? by GenoMax 141k
`clustal omega` can calculate distance matrix between two proteins (makes sense if your proteins are of similar size). You could try that: …
Comment: Should I use unpaired reads from trimmomatic by swbarnes2 14k
If the unpaired are _2, files, the _1 must exist somewhere. But the simple answer is probably going to be to just use all the _2 only. Yo…
Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File? by GenoMax 141k
> The needless granularity (fake precision) was obvious from the start You are assuming that all data generated is always of great quality…
Answer: Blasting two protein sequences vs two nucleotide sequences by Istvan Albert 100k
There are various versions of blast, that search in translated spaces, see blastx and tblastn https://blast.ncbi.nlm.nih.gov/Blast.cgi …
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