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458 results • Page 1 of 10
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729
votes
161
replies
108k
views
100 follow
News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 9 days ago by 1.6k • written 6.3 years ago by 97k
122
votes
42
replies
8.7k
views
21 follow
News: Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
meta biostars
updated 5 weeks ago by 38k • written 10.3 years ago by 97k
81
votes
39
replies
6.0k
views
11 follow
News: State Of Biostar - Future Directions (January 2013)
biostars
updated 5 weeks ago by 38k • written 10.2 years ago by 97k
57
votes
24
replies
5.5k
views
14 follow
News: Join us in building a bioinformatics resource: The Biostar Handbook
biostar-handbook
updated 6 months ago by 38k • written 7.5 years ago by 97k
51
votes
17
replies
3.2k
views
News: Biostars 3.0 is now under testing. It has groups, charms and other interesting features.
meta biostars
updated 5 weeks ago by 38k • written 8.0 years ago by 97k
45
votes
19
replies
5.6k
views
8 follow
News: Gamestorming For Bioinformatics
gamestorming
updated 29 days ago by 38k • written 10.5 years ago by 27k
32
votes
6
replies
12k
views
7 follow
News: Ncbi Releases Entrez Direct, The Entrez Utilities On The Unix Command Line
ncbi genbank pubmed command-line entrez
updated 20 days ago by 38k • written 9.1 years ago by 153k
31
votes
4
replies
6.1k
views
News: Rosalind: A Novel Bioinformatics Education Platform
education
updated 29 days ago by 38k • written 10.5 years ago by ▴ 310
27
votes
9
replies
3.6k
views
News: OSX 10.11 released 30th Sep will be "rootless"
mac osx
updated 6 months ago by 38k • written 7.5 years ago by 13k
27
votes
7
replies
3.1k
views
News: The Biostar Swarm: A Visualization
biostars
updated 5 weeks ago by 38k • written 10.1 years ago by 97k
25
votes
7
replies
2.3k
views
6 follow
News: Who qualifies to be a bioinformatician?
resume bioinformatician vc
updated 8 months ago by 38k • written 7.9 years ago by 153k
25
votes
7
replies
5.8k
views
News: Pubmed Commons : A System That Enables Researchers To Share Their Opinions About Scientific Publications
ncbi pubmed
updated 22 days ago by 38k • written 9.4 years ago by 153k
24
votes
7
replies
4.0k
views
News: #Bioinformatics Crowdcoding
crowd-coding
updated 24 days ago by 38k • written 9.7 years ago by 153k
23
votes
7
replies
4.0k
views
News: Research accounts on GitHub
github git
updated 17 days ago by 38k • written 8.9 years ago by 153k
22
votes
3
replies
2.7k
views
News: Biostar: 10,000 Question Milestone
meta
updated 27 days ago by 38k • written 9.8 years ago by 97k
22
votes
9
replies
6.0k
views
News: Epigenetics Workshop - DNA Methylation Data Analysis
bisulfite-sequencing workshop epigenetics
updated 11 weeks ago by 38k • written 7.8 years ago by 9.9k
21
votes
16
replies
5.1k
views
6 follow
News: Pandora's Toolbox - a collection of bioinformatics programs
Assembly alignment RNA-Seq
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.1k
21
votes
7
replies
7.1k
views
News: Survey: Rna-Seq Analysis For Differential Gene/Transcript Expression [Updated With Results]
transcript RNA-seq gene
updated 28 days ago by 38k • written 10.3 years ago by ▴ 250
20
votes
3
replies
2.3k
views
News: Nature Comment: Core services: Reward bioinformaticians
career-path
updated 9 months ago by 38k • written 8.0 years ago by ★ 2.2k
19
votes
11
replies
6.3k
views
News: Solid Software Tools: Denovo Assembly/Xsq Tools Pipeline Mirrored At Biostar
SOLID
updated 29 days ago by 38k • written 10.6 years ago by 97k
18
votes
3
replies
2.2k
views
News: LAST CALL: Next-Generation Sequencing Data Analysis: A Practical Introduction (Frankfurt, Germany) - 2 seats left
DNA-Seq NGS Workshop Variant-Calling
updated 8 months ago by 38k • written 6.1 years ago by 9.9k
17
votes
6
replies
8.4k
views
News: Final registration deadline: September 15th - Bioinformatics Hands-On NGS Data Analysis Workshops 2014
methylation RNA-seq
updated 17 days ago by 38k • written 9.0 years ago by 9.9k
17
votes
9
replies
3.2k
views
News: My Ncbi Curriculum Vitae Web Application: Sciencv
ncbi
updated 23 days ago by 38k • written 9.5 years ago by 153k
15
votes
18
replies
7.3k
views
6 follow
News: New Free Community Tutorial Website For Bioinformatics Learning
ChIP-seq genome snp RNA-seq
updated 24 days ago by 38k • written 9.7 years ago by ▴ 610
15
votes
3
replies
6.4k
views
News: Top Bioinformatics Contributions Of 2013
bioinformatics
updated 22 days ago by 38k • written 9.3 years ago by ★ 1.1k
15
votes
4
replies
2.3k
views
News: Call For Nominations: 2013 Benjamin Franklin Award
benjamin-franklin-award award
updated 28 days ago by 38k • written 10.1 years ago by 153k
15
votes
2
replies
10k
views
News: Breaking News - Illumina MiniSeq
next-gen-sequencing
updated 7 months ago by 38k • written 7.2 years ago by ★ 1.3k
14
votes
5
replies
3.0k
views
News: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Impact On Biostar.
meta biostars
updated 5 weeks ago by 38k • written 9.6 years ago by 52k
14
votes
6
replies
6.5k
views
News: FINAL CALL: NGS Workshop - A Beginner's Guide to NGS Data Analysis (2 last seats)
NGS RNA-Seq workshop
updated 3 months ago by 38k • written 7.7 years ago by 9.9k
14
votes
4
replies
3.0k
views
News: FULL: NGS Data Analysis Workshop for Beginners in Munich (29 June - 1 Juli 2016)
RNA-Seq next-gen NGS
updated 8 months ago by 38k • written 7.1 years ago by 9.9k
13
votes
2
replies
2.7k
views
News: A Summary Of All Encode Related News On The Openhelix Blog: Encode Floods The News
encode
updated 29 days ago by 38k • written 10.5 years ago by 97k
12
votes
8
replies
6.4k
views
News: rRNA Depletion / Poly-A Selection Responsible for RNA-seq Bias
rRNA-depletion RNA-seq-bias
updated 16 days ago by 38k • written 8.7 years ago by ▴ 640
12
votes
8
replies
3.0k
views
News: 'Potential Rna-Dna Binding Site In Alu Repeat', Or 'Why Should I Allow Multiple Mapping Positions When Analyzing Chipseq Data?'
chipseq rna
updated 24 days ago by 38k • written 9.7 years ago by 9.9k
12
votes
7
replies
3.3k
views
News: Welcome Ensembl REST with more endpoints!
ensembl rest-api
updated 14 days ago by 38k • written 8.4 years ago by ★ 5.2k
12
votes
0
replies
3.1k
views
News: Looking For Feedback On The Json Output For Ncbi E-Utilities
ncbi eutils
updated 28 days ago by 38k • written 10.3 years ago by ▴ 360
11
votes
1
reply
2.6k
views
News: NGS Data Analysis Workshop for Beginners in Munich (full)
RNA-Seq training NGS workshop
updated 8 months ago by 38k • written 6.7 years ago by 9.9k
11
votes
0
replies
3.1k
views
News: BWA 0.7.11 is out, supports ALT contigs
BWA
updated 9 days ago by 38k • written 8.2 years ago by 103k
11
votes
25
replies
4.9k
views
15 follow
News: Questions for the NCBI Next Generation Sequencing Online Workshop Can be Posted with the NCBI_NOW Tag
NCBI_NOW News
updated 6 months ago by 38k • written 7.5 years ago by ▴ 320
11
votes
2
replies
3.4k
views
News: Coursera: Computational Molecular Evolution
course
updated 27 days ago by 38k • written 9.8 years ago by 153k
10
votes
4
replies
577
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 7 days ago by ▴ 30 • written 6 weeks ago by 9.9k
10
votes
4
replies
625
views
News: Good morning
good morning
updated 6 months ago by 97k • written 6 months ago by 84k
10
votes
1
reply
2.9k
views
News: Ucsc: Dna Sequences In Web Pages Indexed By Bing.Com / Microsoft Research (All Phenotype And Literature Tracks)
web ucsc
updated 21 days ago by 38k • written 9.2 years ago by 153k
10
votes
0
replies
3.2k
views
News: 1000 Genomes data on GRCh38
1000Genomes GRCh38 alts alignment
updated 6 months ago by 38k • written 7.4 years ago by ▴ 100
10
votes
7
replies
2.0k
views
News: Free draft copy of book on bioinformatics tools
alignment Assembly RNA-seq next-gen
updated 9 weeks ago by 38k • written 7.8 years ago by ★ 1.1k
10
votes
0
replies
2.8k
views
News: Cfp: Camda 2013 Challenge: Big Data In Life Sciences
ngs conference
updated 27 days ago by 38k • written 10.0 years ago by ▴ 240
9
votes
5
replies
9.6k
views
8 follow
News: Online course: Learn Bioinformatics in 100 hours
biostars online-course
updated 5 weeks ago by 38k • written 5.6 years ago by 97k
9
votes
5
replies
8.2k
views
News: A New Rest Based Api For Kegg: Kyoto Encyclopedia Of Genes And Genomes
kegg api
updated 28 days ago by 38k • written 10.3 years ago by ▴ 50
9
votes
6
replies
1.8k
views
News: No more hidden solutions in bioinformatics
precision-medicine genome-sequencing
updated 9 weeks ago by 38k • written 7.8 years ago by ★ 1.2k
9
votes
4
replies
3.4k
views
News: Conference Announcement - Camda 2013
conference classification
updated 28 days ago by 38k • written 10.2 years ago by ▴ 240
9
votes
3
replies
3.0k
views
News: New Human Genome Assembly (Grch38) Released
human-genome assembly
updated 21 days ago by 38k • written 9.2 years ago by 153k
458 results • Page 1 of 10
Recent Votes
Comment: How to find promoter sequence of a gene?
Answer: BCFtools for somatic vs. germline variant calling
Answer: How to generate GFF/GTF file from cDNA transcipts FASTA file?
Comment: bioinformatics problems solved by graphs data structure
Comment: bioinformatics problems solved by graphs data structure
Answer: How to analize multiple letters codes in COG IDs?
Answer: PCA in gene expression
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Commentator to colindaven 4.6k
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Recent Replies
Answer: BCFtools for somatic vs. germline variant calling by Ram 38k
bcftools does not differentiate. It calls variant loci. I don't think there's a single variant caller that calls both germline and somatic …
Comment: What means this Error when running a script in python?? by Ram 38k
Please format your code properly the next time. I've seen people use wrong formatting options to a reasonable extent, but your formatting w…
Comment: Gaia CNV error TCGA data by Ram 38k
1. Don't use people's names as tags. 2. Format your post properly. I've done what I can for now. 3. Add a link to "the tutorial from @kevin…
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
et mon français est assez bien pour comprendre ce que tu as écrit la ;-)
Comment: How to analize multiple letters codes in COG IDs? by Constanza • 0
Thanks for answering so fast, it was very helpful. I shouldn't pay much attention to if COGs are separated by a comma or not then. As long…
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
well, because this is not you guys' private forum, there are other people participating (not native french speaking) , just to give a reaso…
Answer: How to get gene from PSIBLAST resuts by lieven.sterck 14k
what you likely will need to do: 1. get the ID of the protein that you are interested in (out of result from PSIBLAST) 2. lookup that ID…
Answer: How to analize multiple letters codes in COG IDs? by Mensur Dlakic ★ 23k
The meaning of individual letters is described in a well-known COG functional code: https://ecoliwiki.org/colipedia/index.php/Clusters_o…
Comment: How to find promoter sequence of a gene? by sunyeping ▴ 40
The organism is mice.
Answer: How to generate GFF/GTF file from cDNA transcipts FASTA file? by Pierre Lindenbaum 153k
BLAT your cDNAs to the reference. This should be a PSL file that can be converted to a psl->gff3 converter (e.g: https://github.com/gperte…
Comment: RNAseq: same reads + more complete scaffold = fewer DEGs? by Darked89 4.2k
You may try to check what happened with DEGs obtained using the 300 fragments assembly by getting the sequences of these genes and comparin…
Comment: ExomeDepth installation error by Medha • 0
Thanks, that did work. Also in next steps, there are some arguments like bam.files, I was wondering do we require to have multiple bam fil…
Comment: ExomeDepth installation error by jared.andrews07 ★ 14k
No idea, I don't use databricks. I'd read the docs, find a local expert to help you out, or contact their support, likely in that order.
Comment: ExomeDepth installation error by Medha • 0
Hi @jaredandrews07 thanks for reverting back. I am new to R and just want to make sure ExomeDepth is working for the first time. For the Rs…
Comment: Embedded stop codon in translated nucleotide sequences in DAMBE by Mensur Dlakic ★ 23k
It is not obvious to me what exact steps you did here, but here is what I do know: there will always be stop codons even in open reading fr…
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