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897 results • Page
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6
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0
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News:
Bioinformatics internships with Google Summer of Code 2019
intern
Ensembl
GSOC
updated 11 months ago by
Ram
43k • written 5.2 years ago by
Emily
23k
0
votes
0
replies
2.3k
views
News:
Genomics Summer School- 6 weeks NGS Data Analysis Program
Data-Analysis
Exome
DNA-Seq
RNA-Seq
updated 11 months ago by
Ram
43k • written 7.0 years ago by
piyushkumartiwari
• 0
3
votes
5
replies
2.3k
views
News:
(18 August - "Enzyme Stability Prediction") A free webinar on on-going CAFA5 (Critical Assessment of Functional Annotation of proteins) challenge
gene-ontology
CAFA
protein
8 months ago by
Alexander
▴ 220
0
votes
0
replies
2.3k
views
News:
Workshop on Machine Learning for Transcriptomics Data
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.9 years ago by
elia.brodsky
▴ 340
38
votes
7
replies
2.2k
views
News:
2 last seats available - 7th Berlin Summer School in NGS Data Analysis (September 4-8 in Berlin)
Transcriptomics
DNA-Seq
Variant-Calling
RNA-Seq
9 months ago by
David Langenberger
11k
5
votes
0
replies
2.2k
views
News:
[UPDATED] Hands-On NGS Data Analysis Workshops 2019
NGS
Bisulfite-Seq
RNA-Seq
DNA-Seq
updated 11 months ago by
Ram
43k • written 5.4 years ago by
David Langenberger
11k
0
votes
0
replies
2.2k
views
News:
INTRODUCTION TO PYTHON FOR BIOLOGISTS
RNA-Seq
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.2 years ago by
oliverhooker
▴ 110
0
votes
0
replies
2.2k
views
News:
Bioinformatics, Statistics and R for Next Generation Sequencing Data Analysis
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.5 years ago by
baxy
▴ 170
0
votes
0
replies
2.2k
views
News:
Eukaryotic metabarcoding Workshop. February 26th-March 2nd, 2018 in Berlin
USEARCH
Obitools
Metabarcoding
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.2k
views
News:
Course: Geometric Morphometrics. 5-9 March 2018, Berlin (Germany)
R
Phylogenetics
Geometric-Morphometics
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
6
votes
7
replies
2.2k
views
News:
NCBI wants to remove quality scores from SRA
quality-scores
trimming
Assembly
genome
SRA
updated 10 months ago by
Ram
43k • written 3.8 years ago by
zhousun21
▴ 40
1
vote
0
replies
2.2k
views
News:
Masters In Biomedical Informatics / Bioinformatics, University of Southern California, Los Angeles, CA, USA
masters
students
updated 11 months ago by
Ram
43k • written 6.4 years ago by
david.w.craig
▴ 20
0
votes
0
replies
2.2k
views
News:
Course "Assembly and Annotation of genomes"
Assembly
RNA-Seq
mapping
genome
annotation
updated 11 months ago by
Ram
43k • written 6.7 years ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
2.2k
views
News:
UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
swiss-prot
uniprot
taxonomy
fasta
updated 11 months ago by
Ram
43k • written 6.3 years ago by
Elisabeth Gasteiger
★ 2.4k
1
vote
0
replies
2.2k
views
News:
WORKSHOP - Data visualisation and manipulation using Python
RNA-Seq
Data-visualisation
next-gen
gene
python
updated 11 months ago by
Ram
43k • written 7.1 years ago by
oliverhooker
▴ 110
1
vote
0
replies
2.2k
views
News:
Course: Transposable elements. Berlin 23-27 April 2018
Trasposons
genome
alignment
Assembly
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.2k
views
News:
Training in Bioinformatics for Beginners @ NIH, USA, April 17-20, 2018
beginners
training
updated 11 months ago by
Ram
43k • written 6.1 years ago by
AABI
▴ 140
0
votes
0
replies
2.1k
views
News:
Structural Bioinformatics Training Workshop & Hackathon 2017 - Application of Big Data Technology and 3D Visualization
Structural-Bioinformatics
Big-Data
updated 11 months ago by
Ram
43k • written 7.1 years ago by
peter.rose
▴ 110
0
votes
0
replies
2.1k
views
News:
Workshop: Metagenomics, Metatranscriptomics, and multi'omics for microbial community studies (9-13 April 2018 in Berlin)
Metatranscriptomics
omics
metagenomics
updated 11 months ago by
Ram
43k • written 6.1 years ago by
carlopecoraro2
★ 2.5k
6
votes
2
replies
2.1k
views
News:
RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)
NGS
RNA-Seq
workshop
updated 11 months ago by
Ram
43k • written 6.8 years ago by
David Langenberger
11k
0
votes
0
replies
2.1k
views
News:
Introduction to Python for Biologists, 11-15 September 2017, Edinburgh
programming
python
workshop
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Bert Overduin
★ 3.7k
0
votes
0
replies
2.1k
views
News:
Course. Analysis of single cell RNA-seq data.5-9 February 2018 Berlin (Germany)
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
2.1k
views
News:
Workshop 'Analysis of single cell RNA-seq data' . 5-9 February 2018
RNA-Seq
scRNAseq
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.1k
views
News:
Eukaryotic metabarcoding Workshop
USEARCH
NGS
obitools
blast
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
10
votes
0
replies
2.1k
views
News:
Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
Pan-Cancer
mutations
TCGA
RNA-seq
cancer-driver
updated 11 months ago by
Ram
43k • written 6.3 years ago by
lsp03yjh
▴ 860
6
votes
13
replies
2.1k
views
News:
Ensembl reduced functionality: 10th March-16th April 2020
BLAT
VEP
Ensembl
service
updated 10 months ago by
Ram
43k • written 4.2 years ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
2.1k
views
News:
Course: RADseq data analysis in Berlin (4-8/12/17)
RADseq
Stacks
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
2.1k
views
News:
RNA-Seq Data Analysis Workshop in Berlin, Germany (13 - 16 March 2018)
NGS
RNA-Seq
sequencing
updated 11 months ago by
Ram
43k • written 6.3 years ago by
David Langenberger
11k
2
votes
3
replies
2.1k
views
News:
PDX Models: Tumor-stroma interaction
transcriptome
pdx
R
ChIP-Seq
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Pine Biotech
▴ 70
0
votes
0
replies
2.0k
views
News:
Workshop: RADseq data analysis in Berlin
next-gen
genome
SNP
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.0k
views
News:
Introduction to Machine Learning Workshop
Machine-Learning
Big-Data
Python
updated 11 months ago by
Ram
43k • written 5.3 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.0k
views
News:
Course: Applied Statistics and Bioinformatics with R and Bioconductor. (Berlin, 22-26 January 2018)
BioConductor
Biostatistics
R
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
2.0k
views
News:
Pine Biotech Public Data Analysis Projects
microbiome
cancer
genome
sequence
ngs
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Pine Biotech
▴ 70
12
votes
4
replies
2.0k
views
News:
#NGSchool2018 summer school in bioinformatics
NGSchool
Personalised-Medicine
Nanopore
updated 11 months ago by
Ram
43k • written 5.9 years ago by
kzkedzierska
▴ 290
7
votes
11
replies
2.0k
views
News:
Bringing the power of Big Data to biomedical researchers
NGS
biomedical-research
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Paul Kutzner
▴ 100
1
vote
4
replies
2.0k
views
News:
webserver of TCGA data www.tcgaportal.org
genome
RNA-Seq
TCGA
gene
updated 11 months ago by
Ram
43k • written 5.9 years ago by
xushutan
▴ 40
0
votes
0
replies
2.0k
views
News:
Metagenomics course. 9-13 April 2018
genome
R
Metagenomics
updated 11 months ago by
Ram
43k • written 6.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
2.0k
views
News:
Illumina iSeq 100 sequencer
firefly
illumina
iSeq100
updated 11 months ago by
Ram
43k • written 6.3 years ago by
GenoMax
141k
0
votes
1
reply
2.0k
views
News:
Course: Introduction to GWAS (BERLIN)
GWAS
R
Python
Snakemake
updated 10 months ago by
Ram
43k • written 4.5 years ago by
carlopecoraro2
★ 2.5k
3
votes
1
reply
2.0k
views
News:
Precision Medicine Bioinformatics: From raw genome and transcriptome data to clinical interpretation (PMBI01)
next-gen
assembly
RNA-Seq
gene
updated 11 months ago by
Ram
43k • written 6.2 years ago by
oliverhooker
▴ 110
2
votes
1
reply
2.0k
views
News:
Genomic Data Visualization and Interpretation Workshop
next-gen
R
genome
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.8 years ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
2.0k
views
News:
Landscape Genomics course in Berlin (Germany). Registration deadline is next week
next-gen
R
Genomics
SNP
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
1.9k
views
News:
Coding,data management and Shiny applications using RStudio for evolutionary biologists
coding
data-management
R
shiny
updated 11 months ago by
Ram
43k • written 7.1 years ago by
oliverhooker
▴ 110
8
votes
4
replies
1.9k
views
News:
supporting vg users on biostars
variation-graph
genome
vg
vgteam
updated 10 months ago by
Ram
43k • written 4.6 years ago by
Erik Garrison
★ 2.4k
1
vote
1
reply
1.9k
views
News:
Bioinformatics Contest 2017. Results
contest
updated 11 months ago by
Ram
43k • written 7.1 years ago by
pavlov.ivan095
▴ 70
4
votes
0
replies
1.9k
views
News:
Bioinformatics education: biology-inspired bioinformatics with project-based learning
education
RNA-seq
updated 11 months ago by
Ram
43k • written 6.0 years ago by
elia.brodsky
▴ 340
3
votes
0
replies
1.9k
views
News:
Free Training in Bioinformatic analysis available with Pine Biotech T-BioInfo
RNA-Seq
biotech
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Pine Biotech
▴ 70
0
votes
0
replies
1.9k
views
News:
Course on "Introduction to Linux and workflows for biologists" in Berlin (7 spots left)
genome
next-gen
sequence
Assembly
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.9k
views
News:
LAST CALL: Epigenetics Workshop - DNA Methylation Data Analysis (some last seats available)
bisulfite
NGS
methylation
workshop
updated 11 months ago by
Ram
43k • written 6.5 years ago by
David Langenberger
11k
0
votes
0
replies
1.9k
views
News:
Training in Bioinformatics for Beginners @ NIH, USA, Sep 11-14,2018
training
beginners
updated 11 months ago by
Ram
43k • written 5.7 years ago by
AABI
▴ 140
897 results • Page
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Recent Votes
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
C: Threshold over percentage identity in blastn
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The Biostar Herald for Tuesday, April 23, 2024
Answer: Including plasmid in transcriptome assemblies
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
RNA-seq power estimation using ssizeRNA program
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Recent Replies
Comment: TCGA2STAT Error: Firehose connection
by
Ram
43k
If their github repo is alive, raise an issue there.
Comment: TCGA2STAT Error: Firehose connection
by
Ngrin
• 0
Yeah makes sense. I was following their github. Thanks for pointing this out.
Comment: The Biostar Herald for Tuesday, April 23, 2024
by
Pierre Lindenbaum
161k
bwa 0.7.18 released ! https://github.com/lh3/bwa/releases/tag/v0.7.18
Comment: Downsampling fastq file
by
Ram
43k
I'm moving this to a comment for now.
Answer: Seurat merge and batch correction
by
bk11
★ 2.3k
You can merge your seven Seurat objects and perform integration using **Seurat V5** to remove the batch effect- ```r library(Seurat) libra…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
• 0
Yeah, I've been digging around the web for a while now. Can't find any information about the barcodes. The total number of combinations is …
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
GenoMax
141k
Ah I see that in now. I am not sure why MGI has split the whitelist into two sections. You may need to see if you can dig up some info abou…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
• 0
read 1 is 30bp... which I think you meant to type. If you scroll approximately halfway down the json file I linked to, it has the following…
Comment: TCGA2STAT Error: Firehose connection
by
Ram
43k
The package has been removed from CRAN and BioConductor. Should you even be using it?
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
GenoMax
141k
The barcodes are in location 1-10 and you have the actual list there. I don't know for certain what is in position 11-20 (perhaps spacer, c…
Answer: Including plasmid in transcriptome assemblies
by
GenoMax
141k
> I want to use both STAR and BOWTIE2 for assembly Those programs are aligners not assemblers. But since you are working with bacteria yo…
Comment: How to slice a gvcf file with tabix?
by
Sd
• 0
I already have gvcfs called by chromosome and there are 24 gvcfs per sample which I merged them into a single gvcf per sample. Now I want …
Comment: Find subcluster under a cluster, find differential genes in one cluster between
by
bk11
★ 2.3k
First, could you please explain any reason for not using Seurat V5 approach for your data integration mentioned in [here][1]? > Now moving…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
• 0
So I'd take the json file located [here][1] and essentially create the whitelist to be all possible combinations of the position 1-10 barco…
Comment: TCGA2STAT Error: Firehose connection
by
Ngrin
• 0
Hey Gnana, could you find a way to solve the issue? I have the same error
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