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893 results • Page 4 of 18
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News: Kindle edition of book NO LONGER available. Book available for free
Computational-Biology
9 months ago by sinha.shriprakash ▴ 20
0
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0
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495
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News: Course on Generalised Linear Mixed Models in R
GLMM R Statistics Mixed-Models
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
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0
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452
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Systems-Biology Network-Analysis Bioconductor
updated 8 months ago by 43k • written 9 months ago by ★ 2.5k
0
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0
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368
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News: course on Reproducibility data analysis with R
R Reproducibility Git Github
10 months ago by carlopecoraro2 ★ 2.5k
38
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8
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1.6k
views
6 follow
News: What happens when a bioinformatician has his own genome sequenced for $300?
DNAseq DNA WGS
updated 10 months ago by 35k • written 10 months ago by 11k
4
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0
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637
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News: A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS RNA-Seq single-cell workshop
10 months ago by David Langenberger 11k
0
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0
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690
views
News: Hands-On NGS Data Analysis Courses 2023
RNA-seq DNA-seq Workshop
updated 10 months ago by 43k • written 10 months ago by 11k
1
vote
0
replies
489
views
News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
vote
0
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428
views
News: Good bioinformatics training resources
NGS
updated 10 months ago by 161k • written 10 months ago by ▴ 80
0
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0
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532
views
News: Generalized Linear Models (GLM) course in R
R GLM statistics
10 months ago by carlopecoraro2 ★ 2.5k
0
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0
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461
views
News: course - Advanced Python programming
Python Deep-Learning Machine-Learning
updated 8 months ago by 43k • written 10 months ago by ★ 2.5k
3
votes
2
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678
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News: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomics, Jul 31 - Aug 4, 2023
VCF SARS-CoV-2 NCBI Codeathon
10 months ago by PeterC_NCBI ▴ 410
0
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0
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413
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News: Virtual Genome Annotation Workshop
annotation genome workshop
10 months ago by mia.nahom ▴ 10
0
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0
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677
views
News: Course - Longitudinal data analysis in R
Longitudinal-Data R Genomics
updated 10 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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406
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News: New version of ElasticBLAST (1.1.0) available from NCBI
ElasticBLAST BLAST. NCBI
11 months ago by PeterC_NCBI ▴ 410
0
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0
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372
views
News: Course - Introduction to CRISPR for Ecology and Evolution Studies
Genomics CRISPR
11 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
1.5k
views
News: GWAS course
GWAS R
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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480
views
News: Course - RNAseq data analysis with R/Bioconductor
R Tidyverse RNA-seq Bioconductor
updated 8 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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434
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News: Course - Multiplex imagine analysis/ Spatial Omics
Multiplex-Image-Analysis Spatial-Omics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
3
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3
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1.2k
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
11 months ago by PeterC_NCBI ▴ 410
0
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0
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371
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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384
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News: PROGRAMMING IN R : MOVING FROM BEGINNER TO ADVANCED
Programming Training R
11 months ago by carlopecoraro2 ★ 2.5k
1
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833
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News: NCBI BLAST+ 2.14.0 release includes faster protein and translation search options
NCBI BLAST
11 months ago by PeterC_NCBI ▴ 410
0
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0
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530
views
News: Get Your Science going in 10 Minutes with the Biostar Handbook!
education biostarhandbook
updated 11 months ago by 43k • written 11 months ago by 100k
0
votes
0
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387
views
News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Network-Analysis Bioconductor Systems-Biology
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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425
views
News: Course - Phylogenetic Comparative Methods in R
Comparative-Methods R Phylogenetics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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2
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1.2k
views
News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
11 months ago by David Langenberger 11k
1
vote
0
replies
434
views
News: Course - Statistics for biologists with R
Statistics R
11 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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475
views
News: GWAS course in June
GWAS
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
1
reply
660
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News: 20% Off - Bioinformatics Pipeline Development with Nextflow (May 15-17 in Leipzig, Germany)
NGS nextflow RNAseq pipelines DNAseq
12 months ago by David Langenberger 11k
0
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0
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458
views
News: Single-cell RNAseq with R/Bioconductor course
scRNAseq Bioconductor R
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
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0
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445
views
News: Cellosaurus release 45 is available
knowledgebase cell-line
updated 9 months ago by 43k • written 12 months ago by ▴ 120
0
votes
0
replies
408
views
News: Course - GENERALIZED LINEAR MODELS in R
GLM R Generalised-Linear-Model
updated 11 months ago by 43k • written 13 months ago by ★ 2.5k
0
votes
0
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459
views
News: Bioinformatics courses in February
Genomics Bioinformatics-Training
updated 10 months ago by 43k • written 14 months ago by ★ 2.5k
0
votes
0
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396
views
News: Biosoftics. An Enovation
assembly gene alignment sequence
updated 10 months ago by 43k • written 3.2 years ago by ▴ 10
0
votes
0
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636
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News: Online Training - Introduction to Python
Python-Programming
updated 10 months ago by 43k • written 3.6 years ago by ★ 2.5k
0
votes
0
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1000
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News: [Webinar] Using t-SNE for data analysis : An Introduction by Dr. Laurens van der Maaten (Inventor of t-SNE, Research Director at Facebook AI Research)
scRNA-seq webinar t-SNE
updated 10 months ago by 43k • written 3.6 years ago by ▴ 450
3
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0
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1.8k
views
News: New web BLAST default parameters and search limits are now in place at NCBI
www-blast blast ncbi
updated 10 months ago by 43k • written 3.8 years ago by 141k
0
votes
2
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1.0k
views
News: Training - Introduction to Deep Learning
Deep-Learning Machine-Learning Python-Programming
updated 10 months ago by 43k • written 3.7 years ago by ★ 2.5k
1
vote
0
replies
712
views
News: Training - Data visualization in R with ggplot2
R Dataviz ggplot2
updated 10 months ago by 43k • written 3.6 years ago by ★ 2.5k
1
vote
0
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437
views
Spam: Research Training in Next-Generation Sequencing Data Analysis.
RNA-Seq ChIP-Seq
updated 10 months ago by 43k • written 3.6 years ago by 10
1
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0
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1.3k
views
News: Pan-Structural Variation hackathon in the Cloud (Remote hackathon)
structural-variants sequencing
updated 10 months ago by 43k • written 3.6 years ago by 9.7k
1
vote
0
replies
789
views
News: Announcing the Genetic Engineering Attribution Challenge!
machine-learning data-science competition
updated 10 months ago by 43k • written 3.7 years ago by ▴ 10
0
votes
0
replies
821
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News: :: FINAL CALL :: Only 2 seats left - RNA-Seq Data Analysis Workshop for Beginners in Leipzig, Germany
NGS RNA-Seq transcriptomics
updated 10 months ago by 43k • written 3.7 years ago by 11k
0
votes
0
replies
643
views
News: Software: BIRCH Bioinformatics System 3.70
alignment Assembly sequence genome RNA-Seq
updated 10 months ago by 43k • written 3.7 years ago by ▴ 460
0
votes
0
replies
793
views
News: Training - Introduction to Bioinformatics for beginners
assembly SNP RNA-Seq sequencing
updated 10 months ago by 43k • written 3.7 years ago by ★ 2.5k
0
votes
0
replies
741
views
News: Training in Computational Drug Design and Discovery @NIH
Computational-Biology RNA-Seq Drug-Design Biomedical
updated 10 months ago by 43k • written 3.8 years ago by ▴ 140
0
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0
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645
views
News: Upcoming online UC Davis Bioinformatics Core workshops
Assembly RNA-Seq single-cell
updated 10 months ago by 43k • written 3.8 years ago by ▴ 30
0
votes
0
replies
859
views
News: Training - RADseq data analysis
SNP RADseq Stacks
updated 10 months ago by 43k • written 3.8 years ago by ★ 2.5k
0
votes
0
replies
814
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News: Training in Bioinformatics for Beginners @ NIH
NGS Biomedical Training Biomedical-Informatics
updated 10 months ago by 43k • written 3.8 years ago by ▴ 140
893 results • Page 4 of 18
Recent Votes
Answer: Bwa sampe - BGI
Comment: Where to find the homopolymer regions bed file for Hg002 genome?
A: Code golf: detecting homopolymers of length N in the (human) genome
Code golf: detecting homopolymers of length N in the (human) genome
Answer: WGCNA network from Adjacency or TOM matrix
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
A: What Are The Most Common Stupid Mistakes In Bioinformatics?
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Popular Question to predeus ★ 1.9k
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Recent Replies
Comment: Visualization of PROKKA Annotation Result? by Joe 21k
Colin's answer is essentially the right one I believe, but the more immediate consideration is: *what are you actually trying to show?* Mo…
Comment: Bioinformatics_where do i start by Pierre Lindenbaum 161k
https://www.biostars.org/p/9554614/ ; https://www.biostars.org/p/98983 ; https://www.biostars.org/p/9583727/ :https://www.biostars.org/p/4…
Answer: Bwa sampe - BGI by Pierre Lindenbaum 161k
bwa sampe produces unsorted SAM , not BAM. converting SAM to BAM will reduce the size sorting the BAM will reduce the size (you can …
Comment: Where to find the homopolymer regions bed file for Hg002 genome? by Bikram Kumar • 0
Hi! Should I delete the stack exchange post? I didn't know that cross posting is bad. [https://meta.stackoverflow.com/a/425789/5140632][1] …
Answer: Visualization of PROKKA Annotation Result? by colindaven 6.3k
You need a genome browser and you can probably use GBK or gff3 format. Here are some suggestions - I like JBrowse best, Artemis in its …
Comment: Where to find the homopolymer regions bed file for Hg002 genome? by Pierre Lindenbaum 161k
cross-posted https://bioinformatics.stackexchange.com/questions/22401
Comment: Tumour purity and ploidy estimation by bp22 ▴ 60
Hi Llyod98, This issue is still unresolved and I have not been able to find a tool or solution for purity and ploidy estimation when ther…
Comment: Ensembl gene id conversion by ATpoint 81k
Can you add some examples. It is hard to debug textual descriptions.
Answer: Which experiments generate Position Frequency Matrix? by ATpoint 81k
Yes, ChIP-seq or similar methods that assay the DNA binding of a protein. But for a reliable matrix you don't need one or two but many data…
Comment: Statistical Advice Needed for RNAseq Data Analysis by ATpoint 81k
> ensuring it's not merely a product of random chance If your approach of getting DEGs is a proper and sound one (e.g. DESeq2 or limma) th…
Comment: Can I compare kallisto counts from samples with different amount of reads? by ATpoint 81k
Unequal numbers of reads are normal, that is why normalization is needed. If you want to do simple analysis such as number of detected gene…
Comment: Error in edgeR/Deseq2 Analysis by ATpoint 81k
Please ask at https://help.galaxyproject.org/ which is the Galaxy help forum.
Comment: RNAseq 1 control 2 different treatment by matteo.levorato • 0
yes, this is what I did. However, since my treatments are very similar each other, when I check upregulated genes in one treatment, they ar…
Comment: snakemake output directory by 进 • 0
it is right answer
Comment: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul by Spring • 0
Thank you for the kind guidance!
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