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1,000 results • Page
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News:
course Reproducible Analysis With R
R
Reproducibility
analysis
Data
6 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
277
views
News:
Virtual Genome Assembly workshop
Genome
Workshop
assembly
Virtual
6 months ago by
singh.vijender
▴ 70
10
votes
4
replies
626
views
News:
Good morning
good
morning
updated 6 months ago by
Istvan Albert
97k • written 6 months ago by
Kevin Blighe
84k
6
votes
7
replies
2.8k
views
News:
New in DiffBind: dba.plotProfile() - Peak profiles and profile heatmaps
DiffBind
ChIP-seq
deepTools
visualization
ATAC-seq
6 months ago by
Rory Stark
★ 1.7k
0
votes
0
replies
292
views
News:
Sex Chromosome Evolution course
course
Genomics
updated 3 months ago by
Ram
38k • written 6 months ago by
carlopecoraro2
★ 2.3k
0
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0
replies
246
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News:
Online training - Data visualization in R with ggplot2
Visualization
ggplot2
R
Data
7 months ago by
carlopecoraro2
★ 2.3k
1
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0
replies
311
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News:
Searching for people who can share experience (give free webinars/discuss) on multimodal single cell data
ATAC-seq
CITE-seq
scRNA-seq
7 months ago by
Alexander
▴ 70
0
votes
0
replies
269
views
News:
Online training - Introduction to Deep Learning for biologists
Python
DeepLearning
bigdata
MachineLearning
7 months ago by
carlopecoraro2
★ 2.3k
0
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0
replies
410
views
News:
2023 EMBL Courses and Conferences
EMBL
EMBLMalaria
EESImaging
7 months ago by
EMBL Events
• 0
0
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0
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275
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News:
Online training -Getting the most out of R
R
Science
analysis
Data
7 months ago by
carlopecoraro2
★ 2.3k
0
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0
replies
276
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News:
Online training - Cancer Genomics in R
Cancer
Genomics
R
updated 3 months ago by
Ram
38k • written 7 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
263
views
News:
Online training - DNA methylation in plants and animals
OxfordNanopore
DNAMethylation
BSseq
longreads
PacBio
7 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
289
views
News:
3rd edition of the Analysis of RNA sequencing data with R/Bioconductor course.
RNAseq
Bioconductor
R
8 months ago by
carlopecoraro2
★ 2.3k
4
votes
1
reply
2.1k
views
News:
2014 ISCB Wikipedia Article Competition announcement
ISCB
competition
Wikipedia
written 8.6 years ago by
Ben
★ 2.0k
1
vote
2
replies
567
views
News:
Online training - Introduction to Nextflow
Bionfirmatics
Pipeline
Workflow
Netflow
7 months ago by
carlopecoraro2
★ 2.3k
4
votes
1
reply
396
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop
ngs
data-analysis
updated 8 months ago by
Ram
38k • written 8 months ago by
David Langenberger
9.9k
0
votes
0
replies
367
views
News:
Final Call! Tomorrow (7/8) is the Deadline for Phase 1 submissions of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel
indel-calling
updated 3 months ago by
Ram
38k • written 8 months ago by
sarah_p
▴ 10
0
votes
0
replies
310
views
News:
Automate your NGS data analyses and create reproducible/scalable pipelines with NextFlow
pipeline
Nextflow
automation
8 months ago by
David Langenberger
9.9k
0
votes
1
reply
722
views
News:
Hands-On RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq
Transcriptomics
NGS
Workshop
8 months ago by
David Langenberger
9.9k
0
votes
3
replies
980
views
News:
Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel
indel-calling
updated 3 months ago by
Ram
38k • written 9 months ago by
sarah_p
▴ 10
0
votes
0
replies
284
views
News:
EBI Competency Hub Supporting competency-based training and professional development.
ebi
carreer
9 months ago by
Pierre Lindenbaum
153k
0
votes
0
replies
273
views
News:
Introduction to Statistics in R for biologists
tydeverse
R
Statistics
9 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
279
views
News:
Data analysis with the Tidyverse in July (18th-21st).
Visualization
R
Tidyverse
data-analysis
updated 8 months ago by
Ram
38k • written 9 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
263
views
News:
Use your standard DNA variant caller for SNP calling in Bisulfite-Seq data
bisulfite
BS-Seq
methylation
9 months ago by
David Langenberger
9.9k
0
votes
0
replies
319
views
News:
online training - Data Visualization with Python
Python
Data-Visualization
updated 8 months ago by
Ram
38k • written 9 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
350
views
News:
Cellosaurus release 42 is available
line
cell
biocuration
knowledgebase
database
9 months ago by
Amos Bairoch
▴ 110
0
votes
0
replies
278
views
News:
Online course- Reproducibility in Bioinformatics - 11-13 July
Docker
Reproducibility
updated 3 months ago by
Ram
38k • written 9 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
321
views
News:
Online statistics courses
R
statistics
9 months ago by
carlopecoraro2
★ 2.3k
0
votes
1
reply
374
views
News:
API for accessing SARS-COV-2 genomic data
rpackage
sars
genomics
api
covid
updated 9 months ago by
GenoMax
127k • written 9 months ago by
Emily
• 0
2
votes
0
replies
359
views
News:
UniProt: Annotation of biologically relevant ligands using ChEBI
binding
protein
site
metal
uniprot
chebi
9 months ago by
Elisabeth Gasteiger
★ 2.2k
3
votes
0
replies
393
views
News:
Tutorial on SemiBin (metagenonomics binning tool). June 14 - online
metagenomics
binning
updated 10 months ago by
GenoMax
127k • written 10 months ago by
Luispedro
▴ 60
0
votes
0
replies
260
views
News:
Nanopore direct RNA Sequencing - online course
Sequencing
direct
Nanopore
RNA
10 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
246
views
News:
ONLINE COURSE - LINEAR MIXED MODELS IN R - September 26th-30th
Models
Mixed
R
10 months ago by
carlopecoraro2
★ 2.3k
7
votes
1
reply
457
views
News:
NGSymposium - Conference in Computational Biology, 23-24.09
ML
statistics
conference
ngschool
10 months ago by
kzkedzierska
▴ 290
0
votes
0
replies
302
views
News:
ONLINE course "Population genomic inference from low-coverage whole-genome sequencing data"
lcWGS
Genomics
Population
10 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
301
views
News:
Online course - Metabarcoding in microbial Ecology
Qiime2
Metabarcoding
Microbial-Ecology
updated 3 months ago by
Ram
38k • written 10 months ago by
carlopecoraro2
★ 2.3k
3
votes
1
reply
388
views
News:
Free web seminars related to small non-coding RNA bioinformatics
smallRNA
microRNA
updated 3 months ago by
Ram
38k • written 10 months ago by
laurent.guyon
▴ 60
0
votes
0
replies
300
views
News:
ONLINE COURSE - RADseq data analysis using Stacks
Phylogenomics
Population
RADseq
Genomics
Stacks
10 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
283
views
News:
Online course - Developing R/Bioconductor packages for genomics
Bioconductor
R
updated 3 months ago by
Ram
38k • written 10 months ago by
carlopecoraro2
★ 2.3k
1
vote
0
replies
411
views
News:
Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge is now live!
oncopanel
indel-calling
updated 3 months ago by
Ram
38k • written 10 months ago by
sarah_p
▴ 10
0
votes
2
replies
565
views
News:
ClusteredNR NCBI BLAST database provides faster searches and more informative BLAST results
NCBI
BLAST
10 months ago by
PeterC_NCBI
▴ 210
0
votes
0
replies
214
views
News:
NCBI poster at Bio-IT World on the new cloud BLAST tool, ElasticBLAST
NCBI
BLAST
ElasticBLAST
11 months ago by
PeterC_NCBI
▴ 210
1
vote
0
replies
283
views
News:
DATA ANALYSIS WITH THE TIDYVERSE in July (18th-21st).
tidyverse
data
R
analysis
11 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
380
views
News:
Introduction to Nextflow course
Nextflow
11 months ago by
carlopecoraro2
★ 2.3k
0
votes
0
replies
325
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (May 16-18, 2022)
NGS
RNA
DNA
Workshop
11 months ago by
David Langenberger
9.9k
6
votes
0
replies
362
views
News:
NGSchool2022: Machine Learning in Computational Biology
summer
machine
learning
school
ngschool
ML
statistics
11 months ago by
kzkedzierska
▴ 290
0
votes
1
reply
334
views
News:
Introduction to Deep Learning course
DeepLearning
MachineLearning
bigdata
updated 11 months ago by
cpad0112
21k • written 11 months ago by
carlopecoraro2
★ 2.3k
3
votes
3
replies
739
views
News:
Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow
NGS
pipeline
11 months ago by
David Langenberger
9.9k
0
votes
0
replies
871
views
News:
Pre-Register for the NCTR Indel Calling from Oncopanel Sequencing Data Challenge with FDA’s National Center for Toxicological Research (NCTR) and pre…
oncopanel
indel-calling
updated 3 months ago by
Ram
38k • written 11 months ago by
sarah_p
▴ 10
0
votes
0
replies
263
views
News:
Virtual Genome Assembly Workshop : May 16-19, 2022
assembly
Genome
Workshop
11 months ago by
singh.vijender
▴ 70
1,000 results • Page
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A: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
smoothing or binning bigWig file
List of Ongoing and Planned Long Read Sequencing studies?
Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum?
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A: Changing Output From Gene ID to Symbol When Running findMarkers from Scran
Answer: BLAST Database error: No alias or index file found for nucleotide database
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Comment: split fasta file to train deep learning model
by
shenwei356
7.9k
Excluding sequences containing any letter not belonging to the 20 [amino acids letters](https://github.com/shenwei356/bio/blob/master/seq/a…
Comment: split fasta file to train deep learning model
by
pinheirofabiano
▴ 10
@shenwei356, thank you very much for your help, perfect! But now I realized that some fasta sequences contain the letter "B", which is ou…
Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
by
Mensur Dlakic
★ 23k
I think it depends on the speed of your local disks and the memory amount. On a single node, breaking up the database doesn't sound like a …
Comment: Sample size for population genetics
by
Jeremy Leipzig
21k
Other populations just make the model harder to generalize, not easier.
Comment: Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum?
by
Vincent Laufer
★ 2.5k
i think there is some of that - my most upvoted comment of all time was a dismissive comment i made while extremely tired. for context i ha…
Comment: Molecular biologist / clinical pharmacologist (f/m/d)
by
Jeremy
▴ 770
Is this job on site in Vienna or remote?
Comment: smoothing or binning bigWig file
by
rls_08
▴ 40
if you use bigwigCompare , that would not create a sliding window, but instead, it will output the mean for each bin, according to the -bin…
Comment: Sample size for population genetics
by
zimmer.schweiz
• 0
Thank you so much for your answer. For common polygenic diseases, would it make sense to increase the number of populations sampled, in ord…
Answer: Sample size for population genetics
by
Jeremy Leipzig
21k
For a rare penetrant monogenic disease? A few cases. For a common polygenic disease or trait? 500k-10M
Answer: using GRanges metadata to constrain overlap searches between objects
by
seidel
11k
Rather than do all overlaps all the time for all samples, why not restrict the data by sample when you can. The code below works about 4 ti…
Comment: How to get gene from PSIBLAST resuts
by
Tom
• 0
Hello, thank you for your answer, I have a question, Why the information from the GFF file and from the feature table is different? I see …
Comment: SNP ID (rsID) to Chr no. and Position
by
Jewahir
• 0
Yeah, thank you for that!!
Comment: 1000 genomes hg38 with dbSNP rsid
by
Ram
38k
It should be pretty straightforward. Just to save you some pain, run these on the 1000g VCF once you download it: 1. `vt decompose -s` to …
Comment: 1000 genomes hg38 with dbSNP rsid
by
Vince
▴ 150
Yeah, I had some hope that I wouldn't need to mess with doing this ...
Answer: counting the unmapped reads
by
chemkhi.ali13
• 0
> Hi all, > > I have a sam file, my supervisor asked me to count the number of > unmapped reads, which command I should use? > > sam…
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