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445 results • Page 3 of 9
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News: Online training - Introduction to Deep Learning for biologists
Python DeepLearning bigdata MachineLearning
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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406
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News: 2023 EMBL Courses and Conferences
EMBL EMBLMalaria EESImaging
7 months ago by EMBL Events • 0
0
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0
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273
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News: Online training -Getting the most out of R
R Science analysis Data
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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272
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News: Online training - Cancer Genomics in R
Cancer Genomics R
updated 3 months ago by 38k • written 7 months ago by ★ 2.3k
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0
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257
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News: Online training - DNA methylation in plants and animals
OxfordNanopore DNAMethylation BSseq longreads PacBio
7 months ago by carlopecoraro2 ★ 2.3k
0
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285
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News: 3rd edition of the Analysis of RNA sequencing data with R/Bioconductor course.
RNAseq Bioconductor R
8 months ago by carlopecoraro2 ★ 2.3k
4
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1
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2.1k
views
News: 2014 ISCB Wikipedia Article Competition announcement
ISCB competition Wikipedia
written 8.6 years ago by ★ 2.0k
1
vote
2
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561
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News: Online training - Introduction to Nextflow
Bionfirmatics Pipeline Workflow Netflow
7 months ago by carlopecoraro2 ★ 2.3k
4
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1
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392
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News: Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop ngs data-analysis
updated 8 months ago by 38k • written 8 months ago by 9.9k
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364
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News: Final Call! Tomorrow (7/8) is the Deadline for Phase 1 submissions of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 8 months ago by ▴ 10
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306
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News: Automate your NGS data analyses and create reproducible/scalable pipelines with NextFlow
pipeline Nextflow automation
8 months ago by David Langenberger 9.9k
0
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1
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713
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News: Hands-On RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq Transcriptomics NGS Workshop
8 months ago by David Langenberger 9.9k
0
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3
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978
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News: Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 9 months ago by ▴ 10
0
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0
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281
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News: EBI Competency Hub Supporting competency-based training and professional development.
ebi carreer
8 months ago by Pierre Lindenbaum 153k
0
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0
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271
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News: Introduction to Statistics in R for biologists
tydeverse R Statistics
8 months ago by carlopecoraro2 ★ 2.3k
1
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0
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275
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News: Data analysis with the Tidyverse in July (18th-21st).
Visualization R Tidyverse data-analysis
updated 8 months ago by 38k • written 8 months ago by ★ 2.3k
1
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0
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260
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News: Use your standard DNA variant caller for SNP calling in Bisulfite-Seq data
bisulfite BS-Seq methylation
8 months ago by David Langenberger 9.9k
0
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0
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316
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News: online training - Data Visualization with Python
Python Data-Visualization
updated 8 months ago by 38k • written 8 months ago by ★ 2.3k
0
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0
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346
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News: Cellosaurus release 42 is available
line cell biocuration knowledgebase database
8 months ago by Amos Bairoch ▴ 110
0
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273
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News: Online course- Reproducibility in Bioinformatics - 11-13 July
Docker Reproducibility
updated 3 months ago by 38k • written 9 months ago by ★ 2.3k
0
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0
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318
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News: Online statistics courses
R statistics
9 months ago by carlopecoraro2 ★ 2.3k
0
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1
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369
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News: API for accessing SARS-COV-2 genomic data
rpackage sars genomics api covid
updated 9 months ago by 126k • written 9 months ago by • 0
2
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355
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News: UniProt: Annotation of biologically relevant ligands using ChEBI
binding protein site metal uniprot chebi
9 months ago by Elisabeth Gasteiger ★ 2.2k
3
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389
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News: Tutorial on SemiBin (metagenonomics binning tool). June 14 - online
metagenomics binning
updated 9 months ago by 126k • written 9 months ago by ▴ 60
0
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0
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257
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News: Nanopore direct RNA Sequencing - online course
Sequencing direct Nanopore RNA
9 months ago by carlopecoraro2 ★ 2.3k
0
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0
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244
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News: ONLINE COURSE - LINEAR MIXED MODELS IN R - September 26th-30th
Models Mixed R
10 months ago by carlopecoraro2 ★ 2.3k
7
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1
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453
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News: NGSymposium - Conference in Computational Biology, 23-24.09
ML statistics conference ngschool
10 months ago by kzkedzierska ▴ 290
0
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299
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News: ONLINE course "Population genomic inference from low-coverage whole-genome sequencing data"
lcWGS Genomics Population
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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298
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News: Online course - Metabarcoding in microbial Ecology
Qiime2 Metabarcoding Microbial-Ecology
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
3
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1
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384
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News: Free web seminars related to small non-coding RNA bioinformatics
smallRNA microRNA
updated 3 months ago by 38k • written 10 months ago by ▴ 60
0
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0
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298
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News: ONLINE COURSE - RADseq data analysis using Stacks
Phylogenomics Population RADseq Genomics Stacks
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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280
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News: Online course - Developing R/Bioconductor packages for genomics
Bioconductor R
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
1
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0
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409
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News: Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge is now live!
oncopanel indel-calling
updated 3 months ago by 38k • written 10 months ago by ▴ 10
0
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2
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562
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News: ClusteredNR NCBI BLAST database provides faster searches and more informative BLAST results
NCBI BLAST
10 months ago by PeterC_NCBI ▴ 190
0
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0
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207
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News: NCBI poster at Bio-IT World on the new cloud BLAST tool, ElasticBLAST
NCBI BLAST ElasticBLAST
10 months ago by PeterC_NCBI ▴ 190
1
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0
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279
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News: DATA ANALYSIS WITH THE TIDYVERSE in July (18th-21st).
tidyverse data R analysis
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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374
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News: Introduction to Nextflow course
Nextflow
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
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321
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News: Online Course - A Practical Introduction to NGS Data Analysis (May 16-18, 2022)
NGS RNA DNA Workshop
11 months ago by David Langenberger 9.9k
6
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0
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357
views
News: NGSchool2022: Machine Learning in Computational Biology
summer machine learning school ngschool ML statistics
11 months ago by kzkedzierska ▴ 290
0
votes
1
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332
views
News: Introduction to Deep Learning course
DeepLearning MachineLearning bigdata
updated 11 months ago by 21k • written 11 months ago by ★ 2.3k
3
votes
3
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735
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News: Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow NGS pipeline
11 months ago by David Langenberger 9.9k
0
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0
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868
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News: Pre-Register for the NCTR Indel Calling from Oncopanel Sequencing Data Challenge with FDA’s National Center for Toxicological Research (NCTR) and pre…
oncopanel indel-calling
updated 3 months ago by 38k • written 11 months ago by ▴ 10
0
votes
0
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260
views
News: Virtual Genome Assembly Workshop : May 16-19, 2022
assembly Genome Workshop
11 months ago by singh.vijender ▴ 70
1
vote
0
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296
views
News: Data visualization in Python course
Data Visualization Python
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
271
views
News: Landscape Genomics in R course
LandscapeGenomics
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
279
views
News: Gene Set Enrichment Analysis in R workshop
GSE
11 months ago by carlopecoraro2 ★ 2.3k
0
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0
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250
views
News: Conservation Genomics Workshop
ConservationGenomics
11 months ago by carlopecoraro2 ★ 2.3k
0
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0
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267
views
News: A webinar about Harmony batch correction, by its author
scrna-seq single-cell rna-seq
11 months ago by Jennifer Pham ▴ 450
0
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1
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2.1k
views
News: Nature Index: Novogene is teaming up with laboratories worldwide for life sciences and human health research
NGS Nature Sequencing
updated 3 months ago by 38k • written 11 months ago by ▴ 240
0
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1
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796
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News: ::FINAL CALL:: Online Course | A Practical Introduction to NGS Data Analysis | March 30 - April 1, 2022
DNA-Seq RNA-Seq Workshop
12 months ago by David Langenberger 9.9k
445 results • Page 3 of 9
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Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Comment: samtools idxstats not removing ChrM
The Biostar Handbook. A bioinformatics e-book for beginners.
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
Comment: GATK GenotypeGVCFs explain
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Comment: GATK GenotypeGVCFs explain by Pierre Lindenbaum 153k
https://gatk.broadinstitute.org/hc/en-us/articles/360035531852-Intervals-and-interval-lists
Comment: GATK GenotypeGVCFs explain by Sarah ▴ 30
thank you
Comment: GATK GenotypeGVCFs explain by raphael.B ▴ 270
It limits the operation to some genomic regions given as parameter
Comment: GATK GenotypeGVCFs explain by Sarah ▴ 30
what does the option L
Comment: GATK GenotypeGVCFs explain by Pierre Lindenbaum 153k
GenotypeGVCFs takes a set of GVCF files called with HaplotyperCaler and output a VCF file.
Answer: TCGA Methylation Data and Gene Mapping by Basti ★ 1.4k
CpGs may be annotated to more than >1 gene simply because gene regions overlap on the genome. If you want to associate each gene to a me…
Comment: Circos plot by Fabio Marroni ★ 3.0k
Please give a look to [this post][1] for increasing the probability to get an answer. If I may add some needed info: 1. What exactly do y…
Comment: Trying to install Roary with Conda results in error message by tobiwan ▴ 10
Wow, thank you so much for your explanation! My conda channel is indeed set to strict priority. Should packages with different dependencie…
Comment: FeatureCounts >edgeR > GO by Basti ★ 1.4k
You can use BioMart to convert your "gene-IDs" to gene symbols, but you need to specify from which database your gene identifiers come from
Comment: How to create GO Bar Plot using data obtained from DAVID Functional Enrichment A by Basti ★ 1.4k
If you search "DAVID dotplot" on this forum, you have many answers to your question. Note that you can also perform DAVID Functional Enrich…
Answer: How to implement this two-stage one-to-many workflow using WDL? by Pierre Lindenbaum 153k
nottested, something like: ``` version 1.0 workflow BIOSTAR { call FIRST { } scatter (F in FIRST.each_F)…
Answer: Databases to check variant pathogenicity by AtenaLia ▴ 20
You can try https://genebe.net , it is similar to Varsome though...
Answer: ACMG assignment tools by AtenaLia ▴ 20
Hi, free ACMG implementation without restrictions can be found at https://genebe.net . AFAIK there is also a free API coming.
Comment: Bad quality fastq files for analysis by Gene_MMP8 ▴ 220
I don't have the data available. I want to identify such datasets. The overall aim is to determine what factors influence fastq data qualit…
Comment: mrbayes segmentation fault by Mensur Dlakic ★ 23k
I don't know what exactly the error message means. What I can tell you is that a burn-in of 2500 generations is absolutely inadequate. That…
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