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News: Course live online Intro Bayesian Analyses, March 4-8, 2024
R python bayesian
11 weeks ago by Sole • 0
0
votes
1
reply
942
views
News: FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS RNA-Seq Workshop
11 weeks ago by David Langenberger 11k
0
votes
0
replies
221
views
News: Online course : Meta-Analysis in R
R Meta-Analysis Statistics
updated 11 weeks ago by 43k • written 11 weeks ago by ★ 2.5k
1
vote
0
replies
186
views
News: Cellosaurus release 48 is available
cell-line biocuration cellosaurus knowledgebase
12 weeks ago by Amos Bairoch ▴ 120
0
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0
replies
229
views
News: Online course: Genome Assembly Using Oxford Nanopore Sequencing
Genome-Assembly Nanopore
updated 12 weeks ago by 43k • written 12 weeks ago by ★ 2.5k
0
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0
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246
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News: BLAST FASTA Files Will No Longer Be Available on the FTP Site Effective April 2024
NCBI BLAST
12 weeks ago by PeterC_NCBI ▴ 410
0
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0
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233
views
News: EMBL-EBI Training | Systems biology: from large datasets to biological insight
systems
3 months ago by EMBL Events ▴ 10
0
votes
0
replies
199
views
News: Online course - Sex Chromosome Evolution
Evolution Genomics Sex-Chromosome
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
votes
1
reply
801
views
News: LAST CALL: Online Course - A Practical Introduction to NGS Data Analysis (February 28 - March 1, 2024)
NGS Online-Workshop
updated 3 months ago by 43k • written 3 months ago by 11k
7
votes
2
replies
1.1k
views
News: NGS Data Analysis Workshops 2024
scRNA-seq dna-seq rna-seq nextflow
3 months ago by David Langenberger 11k
0
votes
0
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232
views
News: Online course: Generalized Additive Models (GAMs) in R
R Statistics Gams
3 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
259
views
News: Online course - Introduction to Python for biologists
Python Programming NGSData
3 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
197
views
News: Online course - Introduction to Machine Learning in R for omics data
R Omics MachineLearning StatisticalLearning
3 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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186
views
News: Online course - Flow cytometry data analysis with R/Bioconductor
R Flow-Cytometry Bioconductor
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
votes
1
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308
views
News: Reminder: NCBI ClinVar XML update to accommodate somatic variants coming Jan 29, 2024
SNP XML ClinVar NCBI
3 months ago by PeterC_NCBI ▴ 410
4
votes
0
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198
views
News: Transform Your Research with Our NGS Data Analysis Online Course!
DNAseq NGS Biologists OnlineCourse RNAseq
3 months ago by David Langenberger 11k
0
votes
0
replies
243
views
News: 3rd edition of the Winter School in Bioinformatics - Online February 26 - March 1
genomics reproducibility phylogenomics transcriptomics
3 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
575
views
News: course - Reproducibility in Bioinformatics
Docker Reproducibility
written 13 months ago by ★ 2.5k
0
votes
1
reply
368
views
News: Online Course - Genomic Prediction
Genomic-Prediction Selective-Breeding
updated 3 months ago by 43k • written 3 months ago by ★ 2.5k
0
votes
0
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270
views
News: Flow cytometry data analysis with R/Bioconductor course
FlowCytometry R Bioconductor
4 months ago by carlopecoraro2 ★ 2.5k
2
votes
2
replies
518
views
News: Unix and Shell Scripting for Bioinformatics course
Bash Unix Shell-Scripting
4 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
318
views
News: Bayesian Data Analysis in R course
R Bayesian-Statistics
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
replies
327
views
News: Practical Hands-On Introduction to R course
R Tidyverse Data-Analysis
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
replies
293
views
News: Landscape Genomics course at the EPFL in Lausanne, Switzerland
genomics Landscape-Genomics
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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281
views
News: New version of ElasticBLAST (1.2.0) available from NCBI
ElasticBLAST NCBI BLAST
4 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
276
views
News: Course. - Gene Set Enrichment Analysis in R/Bioconductor - ONLINE, 22-25 January
R Gene-Set-Enrichment-Analysis GSEA Bioconductor
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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290
views
News: University of Connecticut Single Cell RNA-seq Workshop December 12-15, 2023
expression singlecell rnaseq
4 months ago by mia.nahom ▴ 10
0
votes
0
replies
272
views
News: Online course: Introduction to Python, February 12th-March 11th, 2024
python courses
4 months ago by Sole • 0
0
votes
1
reply
369
views
News: Course: Genome Assembly and Annotation
Biodiversity Genome-Assembly Genome-Annotation Long-reads
updated 4 months ago by 43k • written 4 months ago by ★ 2.5k
0
votes
0
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346
views
News: GWAS course
R GWAS
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
3
votes
0
replies
295
views
News: NCBI BLAST+ 2.2.15 now available for download
NCBI Taxonomy BLAST
5 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
298
views
News: Course - Introduction to R Shiny
R Data-Visualisation Shiny
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
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273
views
News: Online expert taught RNA-Seq workshop
workshop
5 months ago by fturner ▴ 10
0
votes
0
replies
314
views
News: Course - RNAseq in non-model organisms
Pacbio RNA-seq Nanopore
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
330
views
News: Next-Generation Sequencing Data Analysis: A Practical Introduction (Nov 29 – Dec 1 in Munich, Germany)
RNAseq DNAseq NGS Workshop
5 months ago by Lars ★ 1.0k
0
votes
0
replies
320
views
News: Course - Computational Tumor Evolution
Tumor-Evolution Cancer-Genomics
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
3
replies
1.4k
views
News: :: FINAL CALL :: A Practical Introduction to NGS Data Analysis (Nov 29 - Dec 1, 2023 in Munich, Germany) - only 2 seats left
DNA-Seq NGS RNA-Seq Workshop
5 months ago by David Langenberger 11k
0
votes
0
replies
353
views
News: Course: Genome Assembly using Oxford Nanopore Sequencing
Genome-Assembly Nanopore
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
311
views
News: Genemod - Lab Management Software
lab-management-software research
updated 5 months ago by 43k • written 5 months ago by • 0
1
vote
0
replies
314
views
News: course - Advanced Python Programming
Python-Programming
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
4
votes
2
replies
2.9k
views
News: New ebook: From cell line to Command line to learn computational biology
unix snakemake computational-biology RNA-seq
5 months ago by Ming Tommy Tang ★ 3.9k
0
votes
0
replies
392
views
News: GWAS course
R GWAS
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
332
views
News: Course - Introduction to Bayesian Data Analysis
R Statistics Bayesian Regression-Modeling
updated 4 months ago by 43k • written 5 months ago by ★ 2.5k
3
votes
0
replies
543
views
News: gnomAD v4 released
gnomad
5 months ago by Pierre Lindenbaum 161k
0
votes
0
replies
329
views
News: Course - Introduction to Machine Learning in R
R Statistical-Learning Omics Machine-Learning
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
412
views
News: Spatial Omics and Multiplexed Image Analysis course
Spatial-Omics Multiplexed-Image-Analysis
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
350
views
News: Virtual de novo RNA-seq (transcriptomics) Workshop: November 13-16, 2023
workshop RNA-seq transcriptomics
updated 5 months ago by 43k • written 5 months ago by ▴ 10
1
vote
0
replies
390
views
News: course - Comparative Genomics
Comparative-Genomics
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
replies
402
views
News: Online course Python Machine Learning in Biology, November 16, 2023
machine-learning python course
updated 6 months ago by 43k • written 6 months ago by • 0
122
votes
44
replies
11k
views
24 follow
News: Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
meta biostars
updated 6 months ago by 43k • written 11.4 years ago by 100k
1,000 results • Page 2 of 20
Recent Votes
Comment: alignment result
Comment: clustalo - align milions of short seq, memory issue
Answer: clustalo - align milions of short seq, memory issue
Comment: downloading genomes in fasta format from accession ids
Comment: PCA plot (Suggestions Needed)
Answer: PCA plot (Suggestions Needed)
PCA plot (Suggestions Needed)
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Popular Question to camillab. ▴ 160
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Recent Replies
Comment: To get p-values for the TPM by VITALA • 0
yes i want what rsem does and i did try with prior-enhanced option/pRSEM, but i think pRSEM is for chipseq data
Comment: alignment result by ahmad.sajad4541 • 0
Thank you so much. Should i proceed for annotation step?
Comment: PCA plot (Suggestions Needed) by swbarnes2 14k
The code you already posted in the bioconductor board had simulated data, and the PCA image is the same.
Answer: Network Alignment by Scooter ▴ 280
Unfortunately, it's not working for me either, and the web site doesn't exist anymore. You might try reaching out to the authors, but I kn…
Answer: How could I generate a gi_taxid_nucl.dmp file similar to the one previously host by ZhangYuanfeng • 0
JUST GIVE THE ANSWER! Here is the solution: ```bash aria2c -c -s 4 -j 4 \ https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/accession2taxid/pd…
Comment: PCA plot (Suggestions Needed) by Aaliya ▴ 10
I have actually used DESeq2 data.
Comment: Why cd-hit-est not work when sequence identity threshold<0.95？ by Dateline • 0
So, why? I have 18GB of data, and when -c=0.95, the run ends in about two days, while when -c=0.9, it has been three days and only a little…
Answer: Heatmap and rna-seq by Kevin Blighe 87k
Hi, you can take the list of GSEA pathways and then use these via GSVA (https://github.com/rcastelo/GSVA) to create a heatmap. You hav…
Comment: Clustering of DAVID gene enrichment results from gene expression studies by Kevin Blighe 87k
You will have to elaborate on what is the error
Comment: clustalo - align milions of short seq, memory issue by emmanouil.a ▴ 120
Hi GenoMax and Mensur Dlakic, thank you for your feedback. I'm changing approach in the way to work with a smaller number of seq.
Comment: Annovar using R package by Pierre Lindenbaum 161k
duplicate of your previous question: https://www.biostars.org/p/9592646/ why using R when there are shell-based tools like VEP ? slivar , …
Comment: Trouble with Pilon installation by Lissa Cruz Saavedra • 0
Hi I am trying to install the software but I didn't find the way to clone from github. Could you help me with the pipeline of instruction…
Comment: Adding CB tag to bam file by swbarnes2 14k
I think both these programs are just adding the same tag to every line. I don't think either cares whether it's called RG or CB
Comment: PCA plot (Suggestions Needed) by swbarnes2 14k
Even if this was real data, the tiny numbers for the PC1 and PC2 indicate that the differences between the samples are all absolutely tiny.…
Comment: Creating Synthetic Sequences for a ML Model by biochugs • 0
Thanks for the input. I'll continue to think of more ideas that may be achievable.
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