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News: Course on Generalised Additive Models In R
Statistics GAMs R
11 weeks ago by carlopecoraro2 ★ 2.3k
0
votes
1
reply
403
views
News: Sex Chromosome Evolution course
Genomics Sex-Chromosome-Evolution
updated 7 weeks ago by 38k • written 11 weeks ago by ★ 2.3k
1
vote
2
replies
554
views
News: New chat server (Discord) for bioinformatics
community
11 weeks ago by Samuel Lampa ★ 1.3k
0
votes
0
replies
289
views
News: Online course - Genome Assembly and Annotation
Long-reads Genome-Annotation Biodiversity Genome-Assembly
updated 7 weeks ago by 38k • written 11 weeks ago by ★ 2.3k
1
vote
3
replies
491
views
News: NCBI BLAST ClusteredNR database now available for blastx and PSI-BLAST searches
PSI-BLAST blastx BLAST NCBI ClusteredNR
11 weeks ago by PeterC_NCBI ▴ 210
1
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0
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795
views
News: New ebook: From cell line to Command line to learn computational biology
snakemake biology unix RNAseq computational
3 months ago by Ming Tommy Tang ★ 2.9k
0
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0
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359
views
News: Winter School in Bioinformatics - last seats available
Genomics Unix RNA-seq docker
updated 7 weeks ago by 38k • written 3 months ago by ★ 2.3k
0
votes
0
replies
246
views
News: Virtual RNA-seq Analysis (Model Organism) Workshop
virtual expression rna-seq analysis workshop
3 months ago by mia.nahom ▴ 10
0
votes
0
replies
277
views
News: Introduction to R Shiny course
WebApplications R RShiny
3 months ago by carlopecoraro2 ★ 2.3k
1
vote
0
replies
317
views
News: New version of ElasticBLAST (1.0.0) available.
NCBI ElasticBLAST BLAST
3 months ago by PeterC_NCBI ▴ 210
0
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1
reply
308
views
News: Courses in January - still a few seats available
R-Shiny Genomics Unix R
updated 7 weeks ago by 38k • written 3 months ago by ★ 2.3k
0
votes
0
replies
195
views
News: Sex Chromosome Evolution course
Genomics Sex-Chromosome-Evolution
updated 3 months ago by 38k • written 3 months ago by ★ 2.3k
0
votes
0
replies
242
views
News: Cellosaurus release 44 is available
cellosaurus cell-line
updated 3 months ago by 38k • written 3 months ago by ▴ 110
0
votes
0
replies
221
views
News: Introductory video to the Cellosaurus
cellosaurus cell-line
updated 3 months ago by 38k • written 3 months ago by ▴ 110
0
votes
3
replies
513
views
News: Nvidia Clara Parabricks is FREE for R&D
nvidia workflow gpu
updated 3 months ago by 2.6k • written 3 months ago by 153k
2
votes
3
replies
343
views
News: NCBI Comparative Genome Viewer now allows searches for genes across aligned assemblies
Browser NCBI Alignments Genome
3 months ago by PeterC_NCBI ▴ 210
1
vote
6
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687
views
News: Course - FLOW CYTOMETRY ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometry R
updated 10 weeks ago by ▴ 70 • written 3 months ago by ★ 2.3k
0
votes
0
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188
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News: INTRODUCTION TO ANALYTICAL PALEOBIOLOGY: FOSSIL RECORD BIASES, DIVERSITY, & BIOGEOGRAPHY
Biogeography Paleobiology R
3 months ago by carlopecoraro2 ★ 2.3k
1
vote
0
replies
202
views
News: Analysis of Cancer Genomes Using R and Bioinformatic Tools
Genomics Cancer-Genomics R
updated 3 months ago by 38k • written 3 months ago by ★ 2.3k
0
votes
0
replies
320
views
News: course - GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
Long-reads Assembly Nanopore Genome
3 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
173
views
News: Online training - VERSION CONTROL FOR RESEARCHERS
Version Control Git Github
3 months ago by carlopecoraro2 ★ 2.3k
0
votes
1
reply
242
views
News: Research Training In NGS Data Analysis
analysis data-analysis
updated 4 months ago by 38k • written 4 months ago by • 0
0
votes
0
replies
285
views
News: Bayesian regression modeling in R course
RegressionModeling Bayesian R
4 months ago by carlopecoraro2 ★ 2.3k
0
votes
4
replies
469
views
News: Ensembl Release 104 and newer GTF files no longer have genes sorted by position
Ensembl GTF
updated 3 months ago by ★ 2.2k • written 4 months ago by ▴ 10
0
votes
0
replies
227
views
News: Genome Assembly and Annotation course
Annotation Nanopore GenomeAssembly Pacbio
4 months ago by carlopecoraro2 ★ 2.3k
3
votes
0
replies
962
views
News: Changes to the default NCBI BLAST nucleotide database (nt). Learn more and provide feedback!
NCBI Databases BLAST
4 months ago by PeterC_NCBI ▴ 210
0
votes
0
replies
236
views
News: Nextflow online training
Nextflow Workflow Reproducibility
updated 3 months ago by 38k • written 4 months ago by ★ 2.3k
0
votes
2
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955
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News: :: FINAL CALL :: Next-Generation Sequencing Data Analysis: A Practical Introduction (December 12-14, 2022 in Munich, Germany)
rnaseq dnaseq sequencing ngs workshop
4 months ago by David Langenberger 9.9k
0
votes
0
replies
268
views
News: The Association for Single Cell Analysis (ASCA)
genomics singlecell metabolomics sequencing proteomics
4 months ago by dnsv.ev • 0
0
votes
0
replies
221
views
News: Deep Learning in Population Genomics and Phylogeography
DeepLearning Phylogeography PopulationGenomics
4 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
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232
views
News: Metabarcoding in Microbial Ecology Workshop
Qiime2 R Metabarcoding Microbial-Ecology
4 months ago by carlopecoraro2 ★ 2.3k
1
vote
2
replies
357
views
News: Gene Set Enrichment Analysis in R/Bioconductor
Gene-Set-Enrichment-Analysis R Cancer-Genomics GSEA
4 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
231
views
News: Analysis of RNA sequencing data with R/Bioconductor course.
Bioconductor RNAseq R
4 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
334
views
News: Winter School in Bioinformatics
course workshop
updated 3 months ago by 38k • written 5 months ago by ★ 2.3k
1
vote
0
replies
305
views
News: Introduction to Nextflow
Nextflow
updated 3 months ago by 38k • written 5 months ago by ★ 2.3k
0
votes
2
replies
458
views
News: Seascape Genomics in R
Genomics Seascape R
updated 3 months ago by 38k • written 5 months ago by ★ 2.3k
0
votes
0
replies
226
views
News: Bioinformatics courses in November
Bioconductor Genomics R
updated 3 months ago by 38k • written 5 months ago by ★ 2.3k
0
votes
0
replies
320
views
News: Flow cytometry analysis with R/Bioconductor course
Bioconductor R Cytometry Flow
5 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
227
views
News: course: RNA-seq analyses in non-model organisms
differential Bioconductor RNAseq expression non-model organisms analysis R
5 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
252
views
News: course - Developing R/Bioconductor packages for genomics
developing package Bioconductor Genomics R
5 months ago by carlopecoraro2 ★ 2.3k
2
votes
0
replies
267
views
News: Four NCBI workshops in October (BLAST, Primer-BLAST, Metagenome analysis, Structures in iCn3D)
metagenomics MagicBLAST BLAST NCBI Primer-BLAST
5 months ago by PeterC_NCBI ▴ 210
0
votes
0
replies
329
views
News: course - Unix and shell scripting for bioinformatics
bash Shell-scripting Unix
updated 3 months ago by 38k • written 5 months ago by ★ 2.3k
0
votes
0
replies
278
views
News: course: Data Visualization in Python
Visualisation Python Data
updated 5 months ago by 127k • written 5 months ago by ★ 2.3k
0
votes
0
replies
260
views
News: Seascape Genomics in R course
Genomics R Seascape Population
6 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
275
views
News: Cellosaurus API
line cell API
6 months ago by Amos Bairoch ▴ 110
0
votes
0
replies
274
views
News: Cellosaurus release 43 is available
cellosaurus cell-line
updated 3 months ago by 38k • written 6 months ago by ▴ 110
0
votes
0
replies
231
views
News: Genomics Webinar: Using Mastermind’s New ClinVar Integration to Accelerate Clinical Diagnoses
variant-interpretation genomics database webinar
updated 3 months ago by 38k • written 6 months ago by • 0
0
votes
0
replies
212
views
News: course: Population Genomic Inference from Low-coverage Whole-genome Sequencing Data
whole-genome genomics population low-coverage sequencing
updated 6 months ago by 21k • written 6 months ago by ★ 2.3k
0
votes
0
replies
220
views
News: :: FINAL CALL :: RNA-Seq Data Analysis Workshop (October 25 - 28, 2022 in Leipzig, Germany) - 2 seats left
RNA-Seq workshop transcriptomics
6 months ago by David Langenberger 9.9k
0
votes
0
replies
204
views
News: Getting the most out of R course - last call
ggplot2 R tidyverse
6 months ago by carlopecoraro2 ★ 2.3k
1,000 results • Page 2 of 20
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Comment: Why not use ONLY promoter-bound peaks when testing for enrichment in differentia
Comment: Why not use ONLY promoter-bound peaks when testing for enrichment in differentia
Answer: What is the NCBI's definition of an "atypical genome"?
Answer: Variant caller reports a homozygous variant genotype, but more reads are associa
Any tips in landing a bioinformatic job?
Answer: What is the NCBI's definition of an "atypical genome"?
Answer: What is the NCBI's definition of an "atypical genome"?
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Comment: GO enrichment analysis by Jeremy ▴ 770
g:Profiler has an Arabidopsis option: [g:Profiler][1] [1]: https://biit.cs.ut.ee/gprofiler/gost
Answer: Any tips in landing a bioinformatic job? by Carambakaracho ★ 3.2k
The first job is a nightmare and you will need some luck. I understand you're looking for an industry offering. Unfortunately I've worked o…
Comment: Best way to visualize .paf or .sam alignment to a fasta file by GenoMax 127k
Why not use IGV with SAM file? If you want a text based viewer then ASCIIGenome: https://asciigenome.readthedocs.io/en/latest/
Answer: What is the NCBI's definition of an "atypical genome"? by MirianT_NCBI ▴ 490
Hi, You can find more information about what constitute an [atypical genome in this FAQ][1]. Here's the list of reasons for a genome to …
Comment: How to get subset of a Seurat object based on metadata? by sunyeping ▴ 80
> skin$predicted_cell_type Error in rep.int(x = colnames(x = x), times = length(x = i)) : unimplemented type 'NULL' in 'rep3…
Comment: using CITE-seq data to cluster single cells by chi.delta ▴ 40
Let's say that based on known FACS data, I already know that three populations exist based on the two antibodies staining: single positive …
Answer: syntax errors when running part3 all-against-all by Adrian Altenhoff ★ 1.0k
Dear Sofia, this looks like the all-vs-all file is corrupted. maybe a race condition of to processes that tried to write the same file. …
Answer: Any tips in landing a bioinformatic job? by zhousun21 ▴ 40
Since you are just starting out, I suggest sending your resume to a few recruiters who specialize in science placements. They will intervie…
Comment: How to get subset of a Seurat object based on metadata? by jv ★ 1.0k
Do you have cells labeled "0:CD8 T Cell" in `skin$predicted_cell_type`?
Comment: using CITE-seq data to cluster single cells by ATpoint 70k
Think about it, how would any clustering with only two genes/features be informative? Is this really what you need? If you break it down, f…
Comment: Module color label in WGCNA by kivanvan • 0
Thank you!
Comment: How to get subset of a Seurat object based on metadata? by sunyeping ▴ 80
This command gives: Error: No cells found
Comment: Snakemake doesn't recognize output files even though they are created by DdogBoss • 0
Ok, the rule is executed, but then it says the output files are missing. I simply don't understand why there is a disconnect there, even …
Comment: Analysing the Effect of a Drug on the Morphological Changes of a Cell Type by E-HR • 0
Had not thought about these questions.
Comment: Analysing the Effect of a Drug on the Morphological Changes of a Cell Type by LChart 2.2k
The linchpin is what features you are interested in; can you describe them in plain English? Something like "how many of the cells are mali…
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