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454 results • Page 3 of 10
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News: Online training - Data visualization in R with ggplot2
Visualization ggplot2 R Data
6 months ago by carlopecoraro2 ★ 2.3k
1
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0
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306
views
News: Searching for people who can share experience (give free webinars/discuss) on multimodal single cell data
ATAC-seq CITE-seq scRNA-seq
6 months ago by Alexander ▴ 70
0
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0
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266
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News: Online training - Introduction to Deep Learning for biologists
Python DeepLearning bigdata MachineLearning
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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409
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News: 2023 EMBL Courses and Conferences
EMBL EMBLMalaria EESImaging
7 months ago by EMBL Events • 0
0
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0
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274
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News: Online training -Getting the most out of R
R Science analysis Data
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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274
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News: Online training - Cancer Genomics in R
Cancer Genomics R
updated 3 months ago by 38k • written 7 months ago by ★ 2.3k
0
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0
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260
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News: Online training - DNA methylation in plants and animals
OxfordNanopore DNAMethylation BSseq longreads PacBio
7 months ago by carlopecoraro2 ★ 2.3k
0
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0
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287
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News: 3rd edition of the Analysis of RNA sequencing data with R/Bioconductor course.
RNAseq Bioconductor R
8 months ago by carlopecoraro2 ★ 2.3k
4
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1
reply
2.1k
views
News: 2014 ISCB Wikipedia Article Competition announcement
ISCB competition Wikipedia
written 8.6 years ago by ★ 2.0k
1
vote
2
replies
562
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News: Online training - Introduction to Nextflow
Bionfirmatics Pipeline Workflow Netflow
7 months ago by carlopecoraro2 ★ 2.3k
4
votes
1
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393
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News: Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop ngs data-analysis
updated 8 months ago by 38k • written 8 months ago by 9.9k
0
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0
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365
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News: Final Call! Tomorrow (7/8) is the Deadline for Phase 1 submissions of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 8 months ago by ▴ 10
0
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307
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News: Automate your NGS data analyses and create reproducible/scalable pipelines with NextFlow
pipeline Nextflow automation
8 months ago by David Langenberger 9.9k
0
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1
reply
715
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News: Hands-On RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq Transcriptomics NGS Workshop
8 months ago by David Langenberger 9.9k
0
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3
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980
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News: Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 3 months ago by 38k • written 9 months ago by ▴ 10
0
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0
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282
views
News: EBI Competency Hub Supporting competency-based training and professional development.
ebi carreer
8 months ago by Pierre Lindenbaum 153k
0
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0
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273
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News: Introduction to Statistics in R for biologists
tydeverse R Statistics
8 months ago by carlopecoraro2 ★ 2.3k
1
vote
0
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276
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News: Data analysis with the Tidyverse in July (18th-21st).
Visualization R Tidyverse data-analysis
updated 8 months ago by 38k • written 8 months ago by ★ 2.3k
1
vote
0
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261
views
News: Use your standard DNA variant caller for SNP calling in Bisulfite-Seq data
bisulfite BS-Seq methylation
8 months ago by David Langenberger 9.9k
0
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0
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318
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News: online training - Data Visualization with Python
Python Data-Visualization
updated 8 months ago by 38k • written 8 months ago by ★ 2.3k
0
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0
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347
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News: Cellosaurus release 42 is available
line cell biocuration knowledgebase database
8 months ago by Amos Bairoch ▴ 110
0
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274
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News: Online course- Reproducibility in Bioinformatics - 11-13 July
Docker Reproducibility
updated 3 months ago by 38k • written 9 months ago by ★ 2.3k
0
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0
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319
views
News: Online statistics courses
R statistics
9 months ago by carlopecoraro2 ★ 2.3k
0
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1
reply
371
views
News: API for accessing SARS-COV-2 genomic data
rpackage sars genomics api covid
updated 9 months ago by 127k • written 9 months ago by • 0
2
votes
0
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356
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News: UniProt: Annotation of biologically relevant ligands using ChEBI
binding protein site metal uniprot chebi
9 months ago by Elisabeth Gasteiger ★ 2.2k
3
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0
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392
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News: Tutorial on SemiBin (metagenonomics binning tool). June 14 - online
metagenomics binning
updated 9 months ago by 127k • written 9 months ago by ▴ 60
0
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0
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259
views
News: Nanopore direct RNA Sequencing - online course
Sequencing direct Nanopore RNA
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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246
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News: ONLINE COURSE - LINEAR MIXED MODELS IN R - September 26th-30th
Models Mixed R
10 months ago by carlopecoraro2 ★ 2.3k
7
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1
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454
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News: NGSymposium - Conference in Computational Biology, 23-24.09
ML statistics conference ngschool
10 months ago by kzkedzierska ▴ 290
0
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300
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News: ONLINE course "Population genomic inference from low-coverage whole-genome sequencing data"
lcWGS Genomics Population
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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299
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News: Online course - Metabarcoding in microbial Ecology
Qiime2 Metabarcoding Microbial-Ecology
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
3
votes
1
reply
385
views
News: Free web seminars related to small non-coding RNA bioinformatics
smallRNA microRNA
updated 3 months ago by 38k • written 10 months ago by ▴ 60
0
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0
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300
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News: ONLINE COURSE - RADseq data analysis using Stacks
Phylogenomics Population RADseq Genomics Stacks
10 months ago by carlopecoraro2 ★ 2.3k
0
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0
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281
views
News: Online course - Developing R/Bioconductor packages for genomics
Bioconductor R
updated 3 months ago by 38k • written 10 months ago by ★ 2.3k
1
vote
0
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411
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News: Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge is now live!
oncopanel indel-calling
updated 3 months ago by 38k • written 10 months ago by ▴ 10
0
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2
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563
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News: ClusteredNR NCBI BLAST database provides faster searches and more informative BLAST results
NCBI BLAST
10 months ago by PeterC_NCBI ▴ 190
0
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0
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208
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News: NCBI poster at Bio-IT World on the new cloud BLAST tool, ElasticBLAST
NCBI BLAST ElasticBLAST
10 months ago by PeterC_NCBI ▴ 190
1
vote
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280
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News: DATA ANALYSIS WITH THE TIDYVERSE in July (18th-21st).
tidyverse data R analysis
10 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
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376
views
News: Introduction to Nextflow course
Nextflow
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
322
views
News: Online Course - A Practical Introduction to NGS Data Analysis (May 16-18, 2022)
NGS RNA DNA Workshop
11 months ago by David Langenberger 9.9k
6
votes
0
replies
360
views
News: NGSchool2022: Machine Learning in Computational Biology
summer machine learning school ngschool ML statistics
11 months ago by kzkedzierska ▴ 290
0
votes
1
reply
333
views
News: Introduction to Deep Learning course
DeepLearning MachineLearning bigdata
updated 11 months ago by 21k • written 11 months ago by ★ 2.3k
3
votes
3
replies
738
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News: Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow NGS pipeline
11 months ago by David Langenberger 9.9k
0
votes
0
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869
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News: Pre-Register for the NCTR Indel Calling from Oncopanel Sequencing Data Challenge with FDA’s National Center for Toxicological Research (NCTR) and pre…
oncopanel indel-calling
updated 3 months ago by 38k • written 11 months ago by ▴ 10
0
votes
0
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262
views
News: Virtual Genome Assembly Workshop : May 16-19, 2022
assembly Genome Workshop
11 months ago by singh.vijender ▴ 70
1
vote
0
replies
299
views
News: Data visualization in Python course
Data Visualization Python
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
273
views
News: Landscape Genomics in R course
LandscapeGenomics
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
280
views
News: Gene Set Enrichment Analysis in R workshop
GSE
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
replies
251
views
News: Conservation Genomics Workshop
ConservationGenomics
11 months ago by carlopecoraro2 ★ 2.3k
0
votes
0
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269
views
News: A webinar about Harmony batch correction, by its author
scrna-seq single-cell rna-seq
11 months ago by Jennifer Pham ▴ 450
454 results • Page 3 of 10
Recent Votes
Comment: Is there a site that takes a list of uniprot IDs/gene IDs as input and create ph
How is allelle frequency calculated ?
Comment: Can I use abundance from Tximport to compare the expression level of transcript
Get Amino Acid Changes From Snp Calls
Answer: Splitting a Nebulosa (Seurat wrapper) visualization by treatment group
Answer: API REST ALINGMENT
Comment: Can I use abundance from Tximport to compare the expression level of transcript
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Answer: List of cloud genomics companies by Simon • 0
[Basepair][1] is a point & click way of analyzing and visualizing a variety of genetic, transcriptomic and epigenetic NGS data types. …
Answer: Multiple samples and species with kallisto bus(tools) by dsull ★ 4.0k
Hello! There are two questions here: 1) Mixed species, and 2) Multiple samples Let's start with question 1: You don't really know what c…
Comment: What is exactly meant by "GENCODE TSS"? by ConvolutedGenome ▴ 10
I dont think im confusing the two, is what I meant: I originally said that the “start” coordinate of every entry termed “transcript” under…
Comment: getting coding exon information from Ensembl API by Ram 38k
Your account has been suspended for bad behavior. I've re-opened the posts that you deleted because those posts belong to the community, no…
Comment: Can I use abundance from Tximport to compare the expression level of transcript by Ram 38k
No. I think you can compare average TPMs as long as you explicitly mention that anywhere you report metrics but don't average counts.
Comment: Manta and alignment name collision by Pierre Lindenbaum 153k
I wrote https://jvarkit.readthedocs.io/en/latest/SamRemoveDuplicatedNames/ to remove this kind of reads, but I'm not sure it's what you're …
Comment: getting coding exon information from Ensembl API by Nobody ▴ 30
can you delete my account please, because i can't do it by myself. Thank you
Comment: Java -xmx option does not limit memory usage in the ImputePipelinePlugin? by twrl8 • 0
Thank you very much! I will try using the singularity options. Thank you for that aswell. I will keep an eye on the docker hub for newer v…
Comment: Is there a site that takes a list of uniprot IDs/gene IDs as input and create ph by Pierre Lindenbaum 153k
ncbi blast a sequence accession vs the other ? then select the multiple sequence alignment view ?
Comment: Can I use abundance from Tximport to compare the expression level of transcript by aimanbarki ▴ 20
So can I average 6 replicates??
Comment: How can I easily remove overlapping transcripts, keeping only longest transcript by Juke34 7.7k
Don't use `--merge_loci` in your command line this was for AGAT version <1.0.0 (and only few scripts), now this is handled via the config.y…
Comment: getting coding exon information from Ensembl API by Ram 38k
> Because you just answer No we don't. I think you're confusing this professional forum contributed to by volunteers with a customer suppo…
Comment: Can I use abundance from Tximport to compare the expression level of transcript by Ram 38k
Oh, you can just use TPM to do that. Within sample comparison is a completely different (and much easier) game.
Comment: ClusterProfiler enrichKEGG – remove organism name in plots? by Sian • 0
Unfortunately yes, there does seem to be a problem with using the older version - when I came to do more analysis yesterday, the enrichKEGG…
Comment: getting coding exon information from Ensembl API by Nobody ▴ 30
Because you just answer when it's a stupid question or when I ask a lot of questions. This is for asking questions not for being judged by …
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