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News: Physalia courses in September
Genomics R Data-Science
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
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0
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444
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News: Cellosaurus release 46
knowledgebase cell-line cellosaurus
9 months ago by Amos Bairoch ▴ 120
0
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0
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335
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News: Course - Data Manipulation and Visualization in Python
Data-Manipulation Data-Visualisation Python
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
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0
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495
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News: Kindle edition of book NO LONGER available. Book available for free
Computational-Biology
10 months ago by sinha.shriprakash ▴ 20
0
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0
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495
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News: Course on Generalised Linear Mixed Models in R
GLMM R Statistics Mixed-Models
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
0
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0
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453
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Systems-Biology Network-Analysis Bioconductor
updated 8 months ago by 43k • written 10 months ago by ★ 2.5k
0
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371
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News: course on Reproducibility data analysis with R
R Reproducibility Git Github
10 months ago by carlopecoraro2 ★ 2.5k
38
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8
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1.6k
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6 follow
News: What happens when a bioinformatician has his own genome sequenced for $300?
DNAseq DNA WGS
updated 10 months ago by 35k • written 10 months ago by 11k
4
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0
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638
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News: A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS RNA-Seq single-cell workshop
10 months ago by David Langenberger 11k
0
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0
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693
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News: Hands-On NGS Data Analysis Courses 2023
RNA-seq DNA-seq Workshop
updated 10 months ago by 43k • written 10 months ago by 11k
1
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0
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496
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News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
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0
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432
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News: Good bioinformatics training resources
NGS
updated 10 months ago by 161k • written 10 months ago by ▴ 80
0
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0
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537
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News: Generalized Linear Models (GLM) course in R
R GLM statistics
10 months ago by carlopecoraro2 ★ 2.5k
0
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0
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463
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News: course - Advanced Python programming
Python Deep-Learning Machine-Learning
updated 8 months ago by 43k • written 10 months ago by ★ 2.5k
3
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2
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682
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News: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomics, Jul 31 - Aug 4, 2023
VCF SARS-CoV-2 NCBI Codeathon
11 months ago by PeterC_NCBI ▴ 410
0
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0
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414
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News: Virtual Genome Annotation Workshop
annotation genome workshop
11 months ago by mia.nahom ▴ 10
0
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0
replies
679
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News: Course - Longitudinal data analysis in R
Longitudinal-Data R Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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412
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News: New version of ElasticBLAST (1.1.0) available from NCBI
ElasticBLAST BLAST. NCBI
11 months ago by PeterC_NCBI ▴ 410
0
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0
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375
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News: Course - Introduction to CRISPR for Ecology and Evolution Studies
Genomics CRISPR
11 months ago by carlopecoraro2 ★ 2.5k
0
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0
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1.5k
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News: GWAS course
GWAS R
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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481
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News: Course - RNAseq data analysis with R/Bioconductor
R Tidyverse RNA-seq Bioconductor
updated 8 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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435
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News: Course - Multiplex imagine analysis/ Spatial Omics
Multiplex-Image-Analysis Spatial-Omics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
3
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3
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1.2k
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
11 months ago by PeterC_NCBI ▴ 410
0
votes
0
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375
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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386
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News: PROGRAMMING IN R : MOVING FROM BEGINNER TO ADVANCED
Programming Training R
11 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
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837
views
News: NCBI BLAST+ 2.14.0 release includes faster protein and translation search options
NCBI BLAST
11 months ago by PeterC_NCBI ▴ 410
0
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0
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533
views
News: Get Your Science going in 10 Minutes with the Biostar Handbook!
education biostarhandbook
updated 11 months ago by 43k • written 11 months ago by 100k
0
votes
0
replies
388
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Network-Analysis Bioconductor Systems-Biology
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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432
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News: Course - Phylogenetic Comparative Methods in R
Comparative-Methods R Phylogenetics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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2
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1.2k
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News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
12 months ago by David Langenberger 11k
1
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0
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436
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News: Course - Statistics for biologists with R
Statistics R
12 months ago by carlopecoraro2 ★ 2.5k
0
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0
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478
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News: GWAS course in June
GWAS
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
1
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665
views
News: 20% Off - Bioinformatics Pipeline Development with Nextflow (May 15-17 in Leipzig, Germany)
NGS nextflow RNAseq pipelines DNAseq
12 months ago by David Langenberger 11k
0
votes
0
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459
views
News: Single-cell RNAseq with R/Bioconductor course
scRNAseq Bioconductor R
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
votes
0
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369
views
News: Environmental Metagenomics - 17-21 April
MAGs Metagenomics
updated 12 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
0
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452
views
News: Announcing the 3rd round of the Nextflow and nf-core mentorship
nf-core mentorship nf_core nextflow
updated 12 months ago by 43k • written 12 months ago by ▴ 470
1
vote
0
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433
views
News: New open access publication on ElasticBLAST in BMC Bioinformatics
NCBI ElasticBLAST BLAST
12 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
436
views
News: Pangenomics course in April!
Pangenomics Prokaryotic-Genomics
12 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
613
views
News: Talk from Aaron Lun on Orchestrating Single-Cell Analysis With Bioconductor
scrna-seq
updated 12 months ago by 43k • written 12 months ago by 81k
0
votes
0
replies
449
views
News: Cellosaurus release 45 is available
knowledgebase cell-line
updated 10 months ago by 43k • written 12 months ago by ▴ 120
0
votes
0
replies
400
views
News: Virtual RAD-seq Analysis Workshop!
workshops popgen genomics rad-seq
12 months ago by mia.nahom ▴ 10
0
votes
0
replies
741
views
News: The Canadian Bioinformatics Workshops are back for summer 2023
CBW training workshop
12 months ago by bioinformatics.ca • 0
0
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0
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411
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News: ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j cypher graph knowledge
13 months ago by Stephen • 0
0
votes
0
replies
477
views
News: Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine declmed declarative icfp precision
12 months ago by Stephen • 0
0
votes
0
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419
views
News: Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian RProject course online
13 months ago by Sole • 0
0
votes
2
replies
880
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
10
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4
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1.2k
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 13 months ago by ▴ 30 • written 14 months ago by 11k
1
vote
0
replies
934
views
News: Summer School in Bioinformatics
Genomics Docker RNA-seq
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
1
vote
1
reply
658
views
News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
13 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
432
views
News: Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements TE Genome-Assembly
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
1,000 results • Page 4 of 20
Recent Votes
what's the genomic location and name of gene responsible for orange and black patches in calico cats
Comment: featureCounts --primary tag counting uniquely mapped reads and excludes multi-ma
Answer: Duplicate marking, read names, and the SRA
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
Answer: Cellranger count error: Input FASTQ file ended prematurely
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Recent Replies
Comment: what's the genomic location and name of gene responsible for orange and black pa by Matthias Zepper 4.5k
It is not entirely off, but evidently also not correct. Melanin biosynthesis is a multistep process, that indeed prominently involves the…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach by Ram 43k
> so a single Rscript could utilise multiple environments and versions How is that sane, let alone "better"? Also, why use `snap` for curl…
Comment: how to find genes that are significantly expressed in brain cortex samples by Ram 43k
Normalized how?
Comment: Duplicate marking, read names, and the SRA by GenoMax 141k
With public data one has to work with what is there. If the information about position is absent then only thing that could be done is to l…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach by BioinfGuru ★ 1.7k
Or better yet. To have an R package that allows access to conda environments via "conda list env" so that environments can be switched with…
Comment: what's the genomic location and name of gene responsible for orange and black pa by GenoMax 141k
If GPT is right then it says that: > The specific gene responsible for the orange and non-orange (black or > gray) fur colors in cats is t…
Comment: what's the genomic location and name of gene responsible for orange and black pa by Jean-Karim Heriche 27k
As far as I know the Orange locus hasn't been mapped to a gene. Maybe this paper will help in narrowing the search: https://www.ncbi.nlm.ni…
Comment: Duplicate marking, read names, and the SRA by Luka • 0
>Curios if there a reference for this? [Apparently it's not deprecated yet][1], but will be soon and the SRA intends for it to be at some …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach by Ram 43k
I prefer RStudio for new projects as well. The moment I need versions though, RStudio becomes a burden. I wish one could launch RStudio fro…
Comment: what's the genomic location and name of gene responsible for orange and black pa by GenoMax 141k
According to ChatGPT: The gene responsible for the orange and black patches of fur in calico cats (and tortoiseshell cats) is the X-linked …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach by BioinfGuru ★ 1.7k
Certainly true. Switching versions is way simpler that way, at the cost of the familiarity of the Rstudio IDE - especially if the code is w…
Comment: Duplicate marking, read names, and the SRA by GenoMax 141k
> fastq-dump is deprecated Curios if there a reference for this? `fasterq-dump` seems to allow for parallel streams but `fastq-dump` is st…
Comment: Duplicate marking, read names, and the SRA by Luka • 0
>In many cases those remain recoverable using the -F option when you dump the data (cloud download not required) The -F option (or any equ…
Answer: Duplicate marking, read names, and the SRA by GenoMax 141k
To be specific, not every dataset in SRA loses the original identifiers. In many cases those remain recoverable using the `-F` option when …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach by Ram 43k
To use different versions of R and bioconductor, you don't really need RStudio. One can simply create new conda environments with the requi…
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