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1,000 results • Page 2 of 20
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3.8k
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News: RepurposeDB - A New Reference Database of Drug Repositioning
precision-medicine drug-repositioning
updated 6 months ago by 41k • written 6.7 years ago by 18k
12
votes
17
replies
3.8k
views
6 follow
News: A programming language for living cells [Cello]
dna sequence research language
updated 7 months ago by 41k • written 7.6 years ago by 11k
3
votes
3
replies
3.8k
views
News: A Tale Of Next Generation Sequencing Platforms: Ion Torrent, Pacific Biosciences And Illumina Miseq
sequencing
updated 9 months ago by 41k • written 11.3 years ago by 99k
7
votes
3
replies
3.7k
views
News: Visualizing genomic data: techniques and challenges. Our interview with Dr. Malachi Griffith, Dr. Obi Griffith and Mr. Zachary Skidmore (The Griffith…
R RNA-Seq genome NGSdata
updated 6 months ago by 41k • written 6.4 years ago by ★ 2.4k
51
votes
17
replies
3.7k
views
News: Biostars 3.0 is now under testing. It has groups, charms and other interesting features.
meta biostars
updated 9 months ago by 41k • written 8.7 years ago by 99k
3
votes
2
replies
3.7k
views
News: Course/Workshop: Informatics For Rna-Sequence Analysis (June, 2013)
RNA-seq
updated 9 months ago by 41k • written 10.9 years ago by 20k
12
votes
7
replies
3.7k
views
News: Welcome Ensembl REST with more endpoints!
ensembl rest-api
updated 8 months ago by 41k • written 9.1 years ago by ★ 5.2k
17
votes
9
replies
3.6k
views
News: My Ncbi Curriculum Vitae Web Application: Sciencv
ncbi
updated 9 months ago by 41k • written 10.2 years ago by 158k
33
votes
5
replies
3.6k
views
News: FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (some last seats available)
Epigenetics Workshop Bisulfite-Sequencing
updated 7 months ago by 41k • written 7.5 years ago by ▴ 460
0
votes
0
replies
3.6k
views
News: Journal Of Bioinformatics Research Studies- Call For Papers
publication biology
updated 8 months ago by 41k • written 9.7 years ago by • 0
9
votes
4
replies
3.6k
views
News: Conference Announcement - Camda 2013
conference classification
updated 9 months ago by 41k • written 10.9 years ago by ▴ 240
11
votes
2
replies
3.6k
views
News: Coursera: Computational Molecular Evolution
course
updated 9 months ago by 41k • written 10.5 years ago by 158k
5
votes
2
replies
3.6k
views
News: Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser RNA-seq ChIP-seq
updated 9 months ago by 41k • written 10.1 years ago by ★ 2.4k
14
votes
3
replies
3.6k
views
News: Updated: Conference/Symposium/Seminar/Workshop alert 2018-2019
seminar symposium conference
updated 6 months ago by 41k • written 5.5 years ago by 5.8k
6
votes
1
reply
3.5k
views
News: Symposium And Rna-Seq Data Analysis Workshop Charlotte May 13-14
RNA RNA-seq training
updated 8 months ago by 41k • written 9.7 years ago by ★ 2.4k
9
votes
5
replies
3.5k
views
News: SAMTOOLS 1.4 released
samtools
updated 6 months ago by 41k • written 6.7 years ago by 158k
5
votes
1
reply
3.5k
views
News: Broad Gatk Haplotypecaller Speed Improved 2-4 X By Cooperation With Intel, And Incremental Multi-Sample Calling Made Possible!
gatk variant-calling
updated 8 months ago by 41k • written 9.7 years ago by ★ 5.2k
27
votes
7
replies
3.4k
views
News: The Biostar Swarm: A Visualization
biostars
updated 9 months ago by 41k • written 10.8 years ago by 99k
0
votes
1
reply
3.4k
views
News: Workshop: Introductory Population Genomics: From Data to Inference
next-gen SNP R
updated 7 months ago by 41k • written 7.0 years ago by ★ 2.4k
2
votes
0
replies
3.4k
views
News: Bioinformatics Open Days 2Nd Edition - 14 And 15 Of March, 2013 At The University Of Minho, Campus Gualtar, Braga, Portugal.
conference
updated 9 months ago by 41k • written 10.9 years ago by ▴ 20
2
votes
0
replies
3.3k
views
News: Synthetic DNA/RNA Spike-in standards for NGS
RNA-Seq assay spike-in
updated 7 months ago by 41k • written 7.3 years ago by 136k
0
votes
2
replies
3.3k
views
News: Course: Practical GWAS using Linux and R. 23-27 October 2017, Berlin (Germany)
GWAS Linux R
updated 6 months ago by 41k • written 6.3 years ago by ★ 2.4k
5
votes
2
replies
3.3k
views
News: Summary of AGBT 2015
AGBT2015 AGBT
updated 8 months ago by 41k • written 8.8 years ago by ▴ 640
8
votes
1
reply
3.3k
views
News: LAST DAY TO REGISTER - NGS Workshop 2015: A Practical Introduction to NGS Data Analysis (Oxford, UK)
RNA-Seq workshop
updated 8 months ago by 41k • written 9.1 years ago by 10k
12
votes
8
replies
3.3k
views
News: 'Potential Rna-Dna Binding Site In Alu Repeat', Or 'Why Should I Allow Multiple Mapping Positions When Analyzing Chipseq Data?'
chipseq rna
updated 9 months ago by 41k • written 10.4 years ago by 10k
11
votes
0
replies
3.2k
views
News: BWA 0.7.11 is out, supports ALT contigs
BWA
updated 8 months ago by 41k • written 8.9 years ago by 104k
14
votes
5
replies
3.2k
views
News: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Impact On Biostar.
meta biostars
updated 9 months ago by 41k • written 10.3 years ago by 53k
12
votes
0
replies
3.2k
views
News: Looking For Feedback On The Json Output For Ncbi E-Utilities
ncbi eutils
updated 9 months ago by 41k • written 11.0 years ago by ▴ 360
2
votes
0
replies
3.2k
views
News: Promoter Design Challenge: Design A Plant Promoter And We Will Construct It.
plant-promoter transcription-factor
updated 9 months ago by 41k • written 10.8 years ago by ▴ 20
4
votes
3
replies
3.2k
views
News: CAFE v4.0 available
phylogenetics CAFE
updated 6 months ago by 41k • written 6.7 years ago by ▴ 150
2
votes
0
replies
3.2k
views
News: "Practical GWAS Using Linux and R" Workshop
GWAS Linux R next-gen
updated 6 months ago by 41k • written 6.4 years ago by ★ 2.4k
3
votes
0
replies
3.2k
views
News: Tumorportal - A Tool For Exploring A Pan-Cancer Dataset
tcga cancer-genomics
updated 9 months ago by 41k • written 9.8 years ago by 19k
9
votes
3
replies
3.2k
views
News: New Human Genome Assembly (Grch38) Released
human-genome assembly
updated 9 months ago by 41k • written 9.9 years ago by 158k
1
vote
1
reply
3.2k
views
News: Course: STATISTICS FOR BIOLOGISTS USING R. 18-22 September (Berlin)
statistics R
updated 7 months ago by 41k • written 6.8 years ago by ★ 2.4k
0
votes
0
replies
3.1k
views
News: sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments
webserver isomiRs microRNA small-RNA
updated 8 months ago by 41k • written 9.1 years ago by 10k
10
votes
17
replies
3.1k
views
7 follow
News: Tell us what you think of the ENA browser?
ena
updated 7 months ago by 41k • written 7.0 years ago by ★ 1.8k
2
votes
0
replies
3.1k
views
News: Short Course And Workshop On Rna-Seq Analysis
RNA-seq
updated 9 months ago by 41k • written 9.9 years ago by ▴ 60
2
votes
2
replies
3.1k
views
News: Upcoming Hands-On NGS Data Analysis Workshops 2018
Mapping Workshop RNA-Seq Quality-Control DNA-Seq
updated 6 months ago by 41k • written 6.0 years ago by 10k
7
votes
1
reply
3.0k
views
News: A Multi-Split Mapping Algorithm For Circular Rna, Splicing, Trans-Splicing, And Fusion Detection
ngs mapping
updated 9 months ago by 41k • written 9.8 years ago by 10k
10
votes
1
reply
3.0k
views
News: Ucsc: Dna Sequences In Web Pages Indexed By Bing.Com / Microsoft Research (All Phenotype And Literature Tracks)
web ucsc
updated 9 months ago by 41k • written 9.9 years ago by 158k
5
votes
0
replies
3.0k
views
News: Penn State now offers an Online Graduate Certificate: Applied Bioinformatics
bioinformatics-education
updated 8 months ago by 41k • written 9.3 years ago by 99k
4
votes
2
replies
3.0k
views
News: NCBI NOW (Next generation sequencing Online Workshop) October 13 - 23 , 2015
NCBI DNA-Seq NGS RNA-Seq
updated 8 months ago by 41k • written 8.2 years ago by ★ 2.2k
4
votes
3
replies
3.0k
views
News: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
blast
updated 6 months ago by 41k • written 5.1 years ago by 11k
13
votes
2
replies
3.0k
views
News: A Summary Of All Encode Related News On The Openhelix Blog: Encode Floods The News
encode
updated 9 months ago by 41k • written 11.2 years ago by 99k
3
votes
2
replies
3.0k
views
News: Bioinformatics On Windows And Windows Cloud
windows cloud
updated 9 months ago by 41k • written 11.0 years ago by ▴ 20
0
votes
1
reply
2.9k
views
News: Workshop: 16S rRNA gene Metabarcoding (Berlin. 3-7 April 2017)
next-gen alignment blast R
updated 7 months ago by 41k • written 6.8 years ago by ★ 2.4k
3
votes
0
replies
2.9k
views
News: Introduction to Python for Biologists and Advanced Python for Biologists courses
Python
updated 10 months ago by 41k • written 8.5 years ago by ★ 3.7k
2
votes
3
replies
2.9k
views
News: Summer Course On Analyzing Next-Generation Sequencing Data, June 10-20, Kellog Biological Station, Michigan State University
education
updated 9 months ago by 41k • written 10.8 years ago by 99k
22
votes
3
replies
2.9k
views
News: Biostar: 10,000 Question Milestone
meta
updated 9 months ago by 41k • written 10.5 years ago by 99k
4
votes
0
replies
2.9k
views
News: New simulation dataset for 'A benchmark for RNA-seq quantification pipelines'
RNA-Seq
updated 7 months ago by 41k • written 7.5 years ago by ★ 2.5k
1,000 results • Page 2 of 20
Recent Votes
Comment: R script in docker
A: What is the difference between mpileup samtools and bcftools?
BBtools bug in reporting the number of substitutions in the console output, it seems to report insanely high rates of heterozygosity
Answer: Genotypes in vcf files
Answer: Tools or R / Python packages to perfom ML models
Comment: Tools or R / Python packages to perfom ML models
Comment: How can I amend the output of a DIAMOND python script?
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Recent Replies
Comment: Tools or R / Python packages to perfom ML models by ATpoint 78k
How about you define what you actually want to do and which question you want to answer. "ML" is a broad and unspecific term.
Comment: PAML Troubleshooting Help by dthorbur ▴ 880
The error appears pretty clear, but without supplying your input it's hard to tell. Do you have a sequence called `KR568314` in your alignm…
Answer: How I add new organism "Beauveria bassiana (strain ARSEF 2860)" in ClueGo plug-i by Scooter ▴ 180
I think you'll need to reach out to the ClueGO authors. They are typically very responsive. -- scooter
Answer: Gene Ontology enrichment with BINGO and ClueGO by Scooter ▴ 180
Hi David, Looks to me like ClueGO is your best bet, although it may not do exactly what you want. If you look under "Statistical Option…
Answer: String App in Cytoscape by Scooter ▴ 180
Greetings, It's not clear to me what happened here. I added the top 5 terms in your screen shot, and got a reasonable network. I also …
Comment: R script in docker by mrashad ▴ 70
Thank you for your answer, it helps me to solve this error.
Answer: BBtools bug in reporting the number of substitutions in the console output, it s by harold.smith.tarheel ★ 4.9k
The rates are for the variants that were called (not total bases). If you add up the percentages you get 100%; if you add up the counts it …
Comment: Tools or R / Python packages to perfom ML models by sil_bioinfo ▴ 30
I would like to train ML models without using datasets with images. Specifically, I would like to use transcriptomic data. Is it still poss…
Answer: Tools or R / Python packages to perfom ML models by Michael 53k
How about TensorFlow? https://www.tensorflow.org/overview You can run the examples directly in Colab. This short introduction uses Ke…
Comment: In what case there are RR reads but no LL reads when detect inversions using IGV by Istvan Albert 99k
you should visualize the image as pairs (view-as-pairs) the image you show is not quite right, it is also important to note what gets color…
Comment: Tools or R / Python packages to perfom ML models by sil_bioinfo ▴ 30
Hi, I'm more comfortable with R right now. I found the R package "mlr3", I don't know if you know of any others. I would appreciate it if y…
Comment: HTseq reports missing attribute name by Istvan Albert 99k
sounds like your genome file is not quite correct, you need to make sure it is in FASTA format all the way through, perhaps get it from a r…
Comment: Can you help me to download list of miRNA from a SRA under a bioproject ? by ATpoint 78k
I it was available then you would see entries there. Still, be aware that this is raw sequencing data, so it's not just a list of miRNAs. C…
Comment: Tools or R / Python packages to perfom ML models by rpolicastro 12k
R and Python have access to most ML methods, it's just a matter of learning either of the languages and then finding which libraries are po…
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp by ATpoint 78k
Seconding that. Is there anything else that you can use for QC, like some Trypan Blue stain of the cells right before loading the chip? Is …
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