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899 results • Page
3 of 18
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3
votes
0
replies
1.9k
views
News:
Deep learning in GATK4
GATK4
deep-learning
GATK
updated 11 months ago by
Ram
43k • written 6.3 years ago by
vdauwera
★ 1.2k
0
votes
2
replies
1.9k
views
News:
Webinar: Multi-omics: Challenges, opportunities and application to biomarker discovery
biomarker
next-gen-sequencing
multiomics
cancer
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Persistent LABS
▴ 750
1
vote
0
replies
1.9k
views
News:
Trinity RNAseq Workshop in Berlin
next-gen
RNA-Seq
Assembly
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
7
votes
8
replies
1.9k
views
News:
A new Stack Exchange site for Research Computing
unix
linux
updated 11 months ago by
Ram
43k • written 6.4 years ago by
tiagoantao
▴ 690
0
votes
0
replies
1.9k
views
News:
Workshop: Advanced Python for biologists
genome
Assembly
sequence
updated 11 months ago by
Ram
43k • written 7.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.9k
views
News:
Metabarcoding: Transforming the way in which biodiversity can be surveyed
next-gen-sequencing
blast
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
4
votes
4
replies
1.9k
views
News:
12th International Conference on Advancements in Bioinformatics and Drug Discovery
genome
Computational-Biology
updated 11 months ago by
Ram
43k • written 6.0 years ago by
bioinformatics
▴ 20
4
votes
1
reply
1.8k
views
News:
scRNA-seq data analysis Workshop in Berlin
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Physalia-courses: R courses in Berlin (Germany)
Dataviz
NGS
Statistics
R
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
4
votes
1
reply
1.8k
views
News:
Bioinformatics Contest 2018
contest
updated 11 months ago by
Ram
43k • written 6.3 years ago by
ksenya1.618
▴ 40
0
votes
0
replies
1.8k
views
News:
Phylogenetic comparative methods for studying diversification and phenotypic evolution (PCME01)
R
updated 11 months ago by
Ram
43k • written 5.5 years ago by
oliverhooker
▴ 60
1
vote
0
replies
1.8k
views
News:
Advanced Python for biologists (APYB02)
genome
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.2 years ago by
oliverhooker
▴ 110
3
votes
0
replies
1.8k
views
News:
New web BLAST default parameters and search limits are now in place at NCBI
www-blast
blast
ncbi
updated 10 months ago by
Ram
43k • written 3.9 years ago by
GenoMax
141k
0
votes
0
replies
1.8k
views
News:
WORK SHOP Eukaryotic metabarcoding
blast
next-gen
gene
rna-seq
updated 11 months ago by
Ram
43k • written 6.9 years ago by
oliverhooker
▴ 110
0
votes
0
replies
1.8k
views
News:
Canadian Bioinformatics 2018 Workshop Series
R
RNA-Seq
SNP
Assembly
updated 11 months ago by
Ram
43k • written 6.3 years ago by
meyer.ann
▴ 30
1
vote
2
replies
1.8k
views
News:
Course: Applied Statistics and Bioinformatics with R and Bioconductor
Statistics
R
Metagenomics
Bioconductor
updated 11 months ago by
Ram
43k • written 6.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
2 Python courses in Berlin
next-gen
python
updated 11 months ago by
Ram
43k • written 6.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
April 17th - Bioinformatics Workshop for Clinicians and Biologists at the University of Nebraska Medical Center
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
elia.brodsky
▴ 340
11
votes
11
replies
1.8k
views
8 follow
News:
Python Data Visualization Course. Last 3 spots left
next-gen
updated 11 months ago by
Ram
43k • written 5.4 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Bioinformatic Analysis of Next Generation Sequencing Data @NIH,USA February 6-9, 2018
analysis
next-gen
seq-data
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
0
votes
0
replies
1.8k
views
News:
WORKSHOP **Metagenomics, metatranscriptomics, and multi'omics for microbial community studies **
Metagenomics
sequencing
metatranscriptomics
updated 11 months ago by
Ram
43k • written 6.2 years ago by
carlopecoraro2
★ 2.5k
2
votes
7
replies
1.8k
views
News:
Beyond pest control: What can we learn from parasites?
docking
heme
parasitism
in-silico
updated 11 months ago by
Ram
43k • written 5.1 years ago by
Michael
54k
1
vote
0
replies
1.8k
views
News:
Data Visualization with Python
next-gen
Python
updated 11 months ago by
Ram
43k • written 5.9 years ago by
carlopecoraro2
★ 2.5k
5
votes
0
replies
1.8k
views
News:
Bioinformatics Contest 2019
bioinforussia
bioinfcontest
bioinfcontest2019
updated 11 months ago by
Ram
43k • written 5.4 years ago by
dashabalashova
▴ 50
0
votes
0
replies
1.8k
views
News:
Course: Metabarcoding of microbial communities. Berlin, 16-20 April 2018
Microbial-Communities
Metabarcoding
updated 11 months ago by
Ram
43k • written 6.4 years ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
1.8k
views
News:
Workshop: Introduction to Python for biologists
genome
next-gen
gene
updated 11 months ago by
Ram
43k • written 7.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Course: Introduction to Bioinformatics using Linux. Berlin, 12-16 March 2018
next-gen
alignment
Assembly
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
10
votes
4
replies
1.8k
views
News:
3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
NGS
RNA-Seq
DNA-Seq
updated 11 months ago by
Ram
43k • written 5.3 years ago by
David Langenberger
11k
0
votes
1
reply
1.8k
views
News:
Spatio-temporal Transcriptome of LncRNAs in Human Brain
Parkinson
lncRNA
Alzheimer
brain
transcriptome
updated 11 months ago by
Ram
43k • written 6.8 years ago by
lsp03yjh
▴ 860
0
votes
2
replies
1.8k
views
News:
Exponential growth of data in biomedicine needs a skilled and experienced workforce
R
biotech
gene
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Pine Biotech
▴ 70
1
vote
0
replies
1.8k
views
News:
Quantitative geographic ecology using R: modelling genomes, niches, and communities (QGER01)
R
updated 11 months ago by
Ram
43k • written 6.1 years ago by
oliverhooker
▴ 60
1
vote
1
reply
1.7k
views
News:
Bioinformatics for Beginners @NIH, (Bethesda, MD, USA) Feb 13 - 16, 2018
beginners
training
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
1
vote
0
replies
1.7k
views
News:
2018 Summer School for Computational Genomics
RNA-Seq
computational-genomics
updated 11 months ago by
Ram
43k • written 6.3 years ago by
scientificcomputingismms
▴ 10
0
votes
0
replies
1.7k
views
News:
Workshop on Next Generation Sequencing Data Analysis
next-gen
RNA-Seq
alignment
updated 11 months ago by
Ram
43k • written 6.7 years ago by
sujana
• 0
0
votes
0
replies
1.7k
views
News:
Metagenomics Workshop in October 2017 in Frankfurt, Germany
NGS
workshop
metagenomics
updated 11 months ago by
Ram
43k • written 6.8 years ago by
David Langenberger
11k
2
votes
1
reply
1.7k
views
News:
Meet Dr. Giovanni Marco Dall'Olio
NGS
training
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.1 years ago by
David Langenberger
11k
1
vote
2
replies
1.7k
views
News:
Workshop: Data analysis in high throughput biology. deadline today (2 places left)
next-gen
R
RNA-Seq
updated 11 months ago by
Ram
43k • written 7.0 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.7k
views
News:
Workshop: Practical GWAS using Linux and R (23-27 October 2017, Berlin)
GWAS
Linux
R
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
1
vote
1
reply
1.7k
views
News:
2nd Berlin Summer School in NGS Data Analysis 2018
DNA-Seq
Workshop
NGS
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
David Langenberger
11k
0
votes
0
replies
1.7k
views
News:
Webinar: How one researcher analyze piRNAs from 7,000 TCGA samples
Cancer
RNA-Seq
piRNAs
Small-RNA
Webinar
updated 11 months ago by
Ram
43k • written 7.1 years ago by
kgosche
▴ 30
1
vote
2
replies
1.7k
views
News:
Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
scRNAseq
webinar
rna-seq
single-cell
updated 11 months ago by
Ram
43k • written 5.0 years ago by
sonpham
▴ 580
1
vote
2
replies
1.7k
views
News:
NCBI Datasets - try it out!
Assembly
refseq
genome
ncbi
updated 10 months ago by
Ram
43k • written 4.1 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.7k
views
News:
Call for Abstracts: BOSC 2019: Bioinformatics Open Source Conference
BOSC
Conference
Open-Source
updated 11 months ago by
Ram
43k • written 5.1 years ago by
Chris Fields
★ 2.2k
0
votes
0
replies
1.7k
views
News:
Introduction to Python for biologists (Berlin). 2-6 October 2017 in Berlin (Germany).Deadlline
Python
NGS
sequencing
blast
updated 11 months ago by
Ram
43k • written 6.7 years ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
1.7k
views
News:
Introduction to bioinformatics for DNA and RNA sequence analysis (IBDR01) - last few places
RNA-Seq
next-gen
workshop
updated 11 months ago by
Ram
43k • written 5.7 years ago by
oliverhooker
▴ 60
2
votes
7
replies
1.7k
views
News:
Bioinformatics workshop or training courses
RNA-Seq
next-gen
ChIP-Seq
updated 11 months ago by
Ram
43k • written 5.7 years ago by
saj98
▴ 140
2
votes
0
replies
1.7k
views
News:
Course - Metabolomics - Berlin, 25-29 November 2019
Metabolomics
R
Bioconductor
updated 11 months ago by
Ram
43k • written 4.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
1.7k
views
News:
2 Days Hands on Workshop on Transcriptome-Seq Data Analysis
RNA-Seq
sequencing
SNP
Assembly
updated 11 months ago by
Ram
43k • written 6.9 years ago by
clovergenls
• 0
0
votes
0
replies
1.7k
views
News:
Integrative Genomic Viewer (IGV) works with Amazon S3
amazon
igv
updated 11 months ago by
Ram
43k • written 5.2 years ago by
Roman Valls Guimerà
▴ 620
0
votes
0
replies
1.7k
views
News:
Webinar: ChIP-Seq / ATAC-Seq Analysis and Integration with Gene Expression Data
webinar
RNA-Seq
ChIP-Seq
updated 11 months ago by
Ram
43k • written 5.6 years ago by
kgosche
▴ 30
899 results • Page
3 of 18
Recent Votes
Answer: Missing protein (VEGF-A) in String db
Missing protein (VEGF-A) in String db
Comment: Sequence read length shorter than flow cell specification
How to calculate reliable Ka/Ks or dN/dS ratio for genes of interest from VCF file
Detecting somatic variants in non-tumor tissue without normals
Answer: Sequence read length shorter than flow cell specification
Answer: Sequence read length shorter than flow cell specification
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Answer: Rare Disease Variant Pathway Analysis
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4.2k
Hi @efc1e545 , First a caveat. the information we most need in order to help guide you to a successful conclusion is not provided in thi…
Answer: Sequence read length shorter than flow cell specification
by
swbarnes2
14k
The company probably had you share your run with someone who needed the extra bases. So you get the extra bases free. Just use them unle…
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
by
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Thank you, the `csvtk spread` is super useful. I usually import into R using `lapply` then `Reduce` using `merge` but this might be easier.
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Thank you for your guidance. The thing is that I am unfamiliar with using such environments, unfortunately.
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Open a new question, with details.
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I recommend https://bioconductor.org/books/3.18/OSCA.basic/normalization.html as well as the "advanced" section in this book.
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QX
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thank you!
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▴ 10
Hello, I have more or less same experimental setting and was wondering how you proceeded with your analysis? Can I reach its GitHub reposit…
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141k
> I ask this as some BLAST command fields as scinames or sblastnames do not give any output with a classic nt BLAST If that information is…
Answer: BLAST using both nucleotides and taxonomic local databases
by
5heikki
11k
This has been discussed [many times][1] [1]: https://www.biostars.org/p/76551/
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by
Bioinfotec
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I think when you give indent to seuObj : ```r Idents(seuObj) <- 'RNA_snn_res.0.1' ``` You may wrongly assign other value to it such as `…
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Bioinfotec
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In fact, there is no gold standard for cell type annotation. To achieve correct cell type classification, you can combine the two methos. F…
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In violin plot, a dot represents a cell. Actually, the straight lines you see in your infected image just means these cells have the same e…
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I have some off-the-chart dN/dS values for few genes (>20) when using your script on VCF obtained from a 20K plasmodium genomes (pf7K). | …
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