updated 2 days ago by
Ram
38k
•
written 7.5 years ago by
DCGenomics
▴
320
11
votes
25
replies
5.0k
views
15 follow
4
votes
0
replies
2.6k
views
4
votes
2
replies
2.8k
views
3
votes
0
replies
1.5k
views
updated 2 days ago by
Ram
38k
•
written 7.5 years ago by
mark.dunning
▴
230
2
votes
1
reply
1.7k
views
1
vote
0
replies
122
views
0
votes
0
replies
98
views
1 day ago by
PeterC_NCBI
▴
210
0
votes
0
replies
94
views
0
votes
0
replies
106
views
3 days ago by
Amos Bairoch
▴
110
0
votes
0
replies
132
views
0
votes
0
replies
133
views
4 days ago by
bioinformatics.ca
•
0
0
votes
0
replies
127
views
1 day ago by
carlopecoraro2
★
2.3k
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
United States, 3 minutes ago
Bologna, 15 minutes ago
croatia, 17 minutes ago
Karachi, 20 minutes ago
United States, 23 minutes ago
University of Miami, 37 minutes ago
Recent Awards •
All
Popular Question to
anasjamshed
▴
120
Popular Question to
smrutimayipanda
▴
20
Popular Question to
mohammedtoufiq91
▴
210
Popular Question to
mnmalash
•
0
Popular Question to
moshi
▴
110
Recent Replies
Comment: how can i filter a sam file from a paf file
by
colindaven
4.6k
Just save yourself a lot of pain and learn to filter the sam/bam file efficiently. It is much more of a widespread standard than PAF.
Comment: Snakemake workflow for trimmomatic
by
GenoMax
127k
Please accept this answer (green check mark) to provide closure to this thread.
Comment: syntax errors when running part3 all-against-all
by
Sofia
•
0
When I started with the gz all-vs-all files for CHICK and ANOCA and started oma, everything ran fine, I got output. Then, in the same direc…
Comment: Quality control of Chip-seq data (NRF and PCB)
by
michelafrancesconi9
•
0
Can you explain me better? Because for the NRF I do :
a) samtools view -c .bam
b)samtools view -c -F 260 .bam
then b/a
and as a bam fi…
Comment: pyCirclize - Circular visualization in Python
by
karenkvn
▴
40
Thank you for responding so quickly - this works perfectly!
Comment: pyCirclize - Circular visualization in Python
by
moshi
▴
110
Please install Biopython with v1.80 or higher.
If biopython>=1.80, there should be no errors.
Comment: Gene family classification using RNA-seq data
by
Dion
•
0
well, I have been given the task to retrieve gene family/categorization. I found sveral papers on family classification, but no actual pack…
Comment: pyCirclize - Circular visualization in Python
by
karenkvn
▴
40
Thank you for this wonderful programme! I am plotting a bacterial chromosome and find that when I plot the NC_000913 chromosome using the e…
Comment: SKAT in R
by
Eliza
▴
20
@acvill can you sujjest maybe pther tools , methods for this ? ( also for every SNP i have data how many patients had the hetro/homozygous…
Comment: TCGA-BRCA tissue and RNAseq problem
by
pinheirofabiano
▴
10
Go to https://portal.gdc.cancer.gov > Exploration > select TCGA and the cancer type you want > select case ID to download the files and hav…
Comment: Snakemake workflow for trimmomatic
by
antoine.fauchois92
•
0
Thank you very much for your reply ! It's working now !
Comment: Dependent p values
by
Eliza
▴
20
@lchart I'm sorry for asking another of questions but I'm new to this field , can you please explain a little more how to use SKAT , saige…
Comment: How to deal with the probe id mapping to multiple gene ids?
by
dare_devil
★
1.7k
similar question [here][1], [here][2] and [here][3]
[1]: https://support.bioconductor.org/p/54838/
[2]: https://support.bioconductor.…
Comment: How to deal with the probe id mapping to multiple gene ids?
by
dare_devil
★
1.7k
@genomax I have used the same platform file only. If you look at probe id and their corresponding `Gene Symbol` or `ENTREZ_GENE_ID` you can…
Comment: How to deal with the probe id mapping to multiple gene ids?
by
GenoMax
127k
Where are you seeing this? [Platform file for this array][1] on GEO has these names uniquely assigned.
[1]: https://www.ncbi.nlm.nih.go…
Traffic: 1068 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6