715
votes
159
replies
104k
views
100 follow
122
votes
42
replies
8.6k
views
21 follow
updated 6.1 years ago by
jonasmst
▴
400
•
written 10.2 years ago by
Istvan Albert
96k
81
votes
39
replies
5.9k
views
11 follow
updated 10.0 years ago by
João Rodrigues
★
2.5k
•
written 10.1 years ago by
Istvan Albert
96k
59
votes
31
replies
3.3k
views
12 follow
updated 6.1 years ago by
helene
▴
50
•
written 6.1 years ago by
David Langenberger
9.8k
11
votes
25
replies
4.9k
views
15 follow
updated 4 months ago by
Ram
37k
•
written 7.4 years ago by
DCGenomics
▴
320
54
votes
24
replies
3.1k
views
12 follow
written 6.9 years ago by
poisonAlien
★
3.1k
57
votes
24
replies
5.4k
views
14 follow
updated 4 months ago by
Ram
37k
•
written 7.4 years ago by
Istvan Albert
96k
24
votes
21
replies
5.6k
views
9 follow
45
votes
19
replies
5.5k
views
8 follow
10.4 years ago by
Giovanni M Dall'Olio
27k
15
votes
18
replies
7.2k
views
6 follow
12
votes
17
replies
3.1k
views
6 follow
10
votes
17
replies
2.5k
views
7 follow
50
votes
17
replies
3.2k
views
updated 7 months ago by
Ram
37k
•
written 7.9 years ago by
Istvan Albert
96k
45
votes
16
replies
4.9k
views
12 follow
updated 5.2 years ago by
Chris Miller
22k
•
written 5.2 years ago by
Hussain Ather
▴
970
21
votes
16
replies
5.0k
views
6 follow
updated 10 months ago by
Ram
37k
•
written 8.1 years ago by
ugly.betty77
★
1.1k
11
votes
13
replies
2.4k
views
6.4 years ago by
Ben_Ensembl
★
2.2k
48
votes
13
replies
24k
views
10 follow
6
votes
13
replies
1.4k
views
21
votes
11
replies
8.7k
views
6 follow
18
votes
11
replies
3.3k
views
14
votes
11
replies
2.2k
views
6 follow
updated 4.8 years ago by
ababaian
▴
50
•
written 5.1 years ago by
anicet.ebou
▴
170
11
votes
11
replies
1.2k
views
8 follow
updated 4.2 years ago by
JohnBlue81
▴
300
•
written 4.2 years ago by
carlopecoraro2
★
2.2k
19
votes
11
replies
6.3k
views
updated 9 months ago by
Ram
37k
•
written 10.4 years ago by
Istvan Albert
96k
7
votes
11
replies
1.5k
views
updated 5.5 years ago by
Michael Dondrup
52k
•
written 5.5 years ago by
Paul Kutzner
▴
100
8
votes
10
replies
3.4k
views
22
votes
10
replies
4.9k
views
9
votes
9
replies
6.7k
views
News:
NovaSeq quality analysis
5.6 years ago by
Brian Bushnell
18k
0
votes
9
replies
1.9k
views
updated 14 months ago by
Ram
37k
•
written 8.6 years ago by
Matt Shirley
10k
27
votes
9
replies
3.5k
views
17
votes
9
replies
3.2k
views
updated 9.4 years ago by
Giovanni M Dall'Olio
27k
•
written 9.4 years ago by
Pierre Lindenbaum
152k
22
votes
9
replies
5.9k
views
updated 4 weeks ago by
Ram
37k
•
written 7.7 years ago by
David Langenberger
9.8k
13
votes
9
replies
1.8k
views
6
votes
9
replies
3.6k
views
updated 15 months ago by
Ram
37k
•
written 8.6 years ago by
Pierre Lindenbaum
152k
8
votes
8
replies
2.2k
views
written 2.9 years ago by
Istvan Albert
96k
12
votes
8
replies
2.9k
views
7
votes
8
replies
1.4k
views
updated 5.2 years ago by
GenoMax
125k
•
written 5.2 years ago by
tiagoantao
▴
690
7
votes
8
replies
3.6k
views
12
votes
8
replies
6.3k
views
13
votes
8
replies
2.2k
views
6.9 years ago by
Anima Mundi
★
2.9k
10
votes
7
replies
1.6k
views
25
votes
7
replies
2.3k
views
6 follow
updated 7 months ago by
Ram
37k
•
written 7.8 years ago by
Pierre Lindenbaum
152k
25
votes
7
replies
5.7k
views
24
votes
7
replies
4.0k
views
updated 8.9 years ago by
Rad
▴
800
•
written 9.6 years ago by
Pierre Lindenbaum
152k
27
votes
7
replies
3.1k
views
updated 14 months ago by
Ram
37k
•
written 10.0 years ago by
Istvan Albert
96k
13
votes
7
replies
5.1k
views
23
votes
7
replies
3.9k
views
updated 16 months ago by
Ram
37k
•
written 8.7 years ago by
Pierre Lindenbaum
152k
6
votes
7
replies
4.7k
views
6
votes
7
replies
1.4k
views
12
votes
7
replies
3.2k
views
21
votes
7
replies
7.1k
views
Recent Votes
Recent Locations •
All
India, 13 minutes ago
Bologna, 22 minutes ago
India, 38 minutes ago
Palau, 50 minutes ago
Tehran, 54 minutes ago
Israel, 1 hour ago
India, 1 hour ago
Recent Awards •
All
Popular Question to
Prakash
★
2.2k
Popular Question to
alslonik
▴
250
Popular Question to
atakanekiz
▴
310
Popular Question to
edus_bioinfo
▴
20
Popular Question to
storm1907
▴
30
Popular Question to
tarek.mohamed
▴
350
Recent Replies
Comment: Network analysis for two Factors
by
seidel
10k
Have you looked at any tutorials? Three are many out there. ([1][1], [2][2], [3][3], [etc.][4]) Do you have a preferred language?
[1]: …
Comment: ceres score in crispr screen
by
seidel
10k
Are you looking for moral support or technical support? Have you tried using it with an older version of R and bioconductor? (i.e. circa 20…
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
If you aren't willing to provide more precise information than this, sufficient for a reader to reproduce what you're seeing, I will delete…
Answer: Error while trying to install salmon
by
Chris
▴
10
Donwloading the package from conda (https://anaconda.org/conda-forge/boost/files?version=1.60.0) worked for me
wget https://anaconda.org/…
Answer: finding error to run edgeR, error in ploting MDS and after that in model matrix
by
Gordon Smyth
★
5.4k
First issue is that GEO series matrix files can't be read using `read.delim`.
Second issue is the data are from Agilent microarrays and …
Comment: PLINK2 selecting variants based on INFO score
by
m.c.roozen
•
0
I have tried that (the .pvar file contains the "1:10586" form as ID which I mentioned above) which leads to the same output as above, 0 var…
Answer: samtools markdup in Rsamtools
by
joe
▴
350
You can run any system command from inside R using `system()`. This works well if there is a single command without many dependencies. For …
Comment: samtools markdup in Rsamtools
by
Pierre Lindenbaum
152k
> But other solutions are also fine:
bash, nextflow, snakemake
Answer: samtools markdup in Rsamtools
by
ATpoint
68k
My honest opinion: Do processing of sequencing data on the standard command line with samtools. There is no need for the added complexity t…
Comment: To batch correct or analyse separately?
by
predeus
★
1.8k
Another great and up-to-date resource is this: https://www.sc-best-practices.org/preamble.html
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
The --exclude file must use the same variant IDs as your .pvar file. You should elaborate on what seemed to go wrong when you tried to arr…
Comment: phylogeny
by
炫
•
0
Hello, my problem is the same as yours, did you finally solve this problem?
Comment: Issue with hmmcalibrate during tutorial.
by
apcreyes29
•
0
If that's the case then I'll just proceed then. Thank you!
Answer: To batch correct or analyse separately?
by
ATpoint
68k
Instead of writing that all down I recommend to read the relevant part of the Bioconductor scRNA-seq book (OSCA) which covers the "how's" a…
Traffic: 734 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6