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News: Online Training - Nanopore direct RNA Sequencing
RNA-Seq rna-seq Nanopore News
6 months ago by carlopecoraro2 ★ 2.0k
0
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0
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151
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News: rPHG v0.1.11 Updates
rphg News
6 months ago by Brandon M. • 0
1
vote
0
replies
235
views
News: Interested in Genome Assembly using long-reads?
assembly Assembly PacBio Nanopore News
6 months ago by carlopecoraro2 ★ 2.0k
1
vote
0
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219
views
News: Making molecular data FAIR for ML
fair molecular data ml News
6 months ago by Elucidata ▴ 240
4
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2
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3.0k
views
News: GeneSCF (Gene Enrichment Tool): Advice to users
genescf kegg GO annotation GeneSCF News
6 months ago by EagleEye 6.8k
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226
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News: Training - Genome Assembly with Pacbio and HIC data
assembly Assembly News
6 months ago by carlopecoraro2 ★ 2.0k
2
votes
0
replies
653
views
News: Primer-BLAST can now design primers for a group of related target sequences!
primer-blast blast News
6 months ago by GenoMax 99k
3
votes
1
reply
211
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News: Ensembl Pre! site retirement - 31st January 2021
Ensembl News
6 months ago by Ben_Ensembl ★ 1.7k
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235
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News: Online training - NGS analysis for gene regulation and epigenomics
ChIP-Seq Epigenomics next-gen genome R News
6 months ago by carlopecoraro2 ★ 2.0k
0
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0
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275
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News: Register now for online PacBio Iso-Seq workshop
iso-seq pacbio News
6 months ago by najoshi ▴ 30
1
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0
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406
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News: Release 1.11 of HTSlib, SAMtools and BCFtools
samtools bcftools htslib News
6 months ago by Pierre Lindenbaum 135k
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535
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News: Online Course - A Practical Introduction to NGS Data Analysis (Dec 9 - 11, 2020) - 5 seats left
RNA-Seq DNA-Seq Workshop News
6 months ago by David Langenberger 9.6k
6
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1
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1.4k
views
News: The Art of Bioinformatics Scripting. A new book in the Biostar Handbook collection.
bioinformatics education News
updated 7 months ago by • 0 • written 17 months ago by 87k
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290
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News: DNA Methylation Data Analysis Workshop - 2-5 November 2020 in Berlin
NGS bisulfite-seq workshop News
7 months ago by David Langenberger 9.6k
0
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0
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200
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News: Online Training - Introduction to Python
Programming Python News
7 months ago by carlopecoraro2 ★ 2.0k
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315
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News: [Webinar] Using t-SNE for data analysis : An Introduction by Dr. Laurens van der Maaten (Inventor of t-SNE, Research Director at Facebook AI Research)
webinar scRNA-seq t-SNE News
7 months ago by Jennifer Pham ▴ 420
3
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0
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383
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News: New web BLAST default parameters and search limits are now in place at NCBI
blast www-blast ncbi News
7 months ago by GenoMax 99k
0
votes
2
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373
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News: Training - Introduction to Deep Learning
DeepLearning Python MachineLearning Programming News
7 months ago by carlopecoraro2 ★ 2.0k
1
vote
0
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197
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News: Training - Data visualization in R with ggplot2
R Dataviz ggplot2 News
7 months ago by carlopecoraro2 ★ 2.0k
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1
reply
233
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News: Research Training in Bioinformatics.
genome News
7 months ago by rasalsi2012 ▴ 10
1
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184
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News: Research Training in Next-Generation Sequencing Data Analysis.
ChIP-Seq RNA-Seq News
7 months ago by rasalsi2012 ▴ 10
1
vote
0
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300
views
News: Pan-Structural Variation hackathon in the Cloud (Remote hackathon)
sequencing structural varaints News
7 months ago by Medhat 8.9k
1
vote
0
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281
views
News: Announcing the Genetic Engineering Attribution Challenge!
competition data science machine learning news News
8 months ago by shellyholland8 ▴ 10
0
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0
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335
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News: :: FINAL CALL :: Only 2 seats left - RNA-Seq Data Analysis Workshop for Beginners in Leipzig, Germany
RNA-Seq NGS transcriptomics News
8 months ago by David Langenberger 9.6k
0
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0
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226
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News: Software: BIRCH Bioinformatics System 3.70
sequence alignment genome Assembly RNA-Seq News
8 months ago by brian.fristensky ▴ 160
0
votes
0
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270
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News: Training - Introduction to Bioinformatics for beginners
assembly sequencing rna-seq RNA-Seq SNP News
8 months ago by carlopecoraro2 ★ 2.0k
0
votes
0
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206
views
News: Training in Computational Drug Design and Discovery @NIH
Biomedical ComputationalBiology DrugDesign RNASeq News
9 months ago by AABI ▴ 120
0
votes
1
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254
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News: Genetic Testing for Ovarian Cancer - A comprehensive genetic analysis approach for early detection
Breast Cancer Test Gene Screening Breast Cancer News
9 months ago by Genes2Me • 0
0
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213
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News: Upcoming online UC Davis Bioinformatics Core workshops
Assembly RNA-Seq single-cell News
9 months ago by najoshi ▴ 30
0
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0
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250
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News: Training - RADseq data analysis
RADseq SNP Stacks News
9 months ago by carlopecoraro2 ★ 2.0k
0
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0
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283
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News: Training in Bioinformatics for Beginners @ NIH
Biomedical NGS BiomedicalInformatics Training News
9 months ago by AABI ▴ 120
0
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0
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236
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News: Training in Creating Plots, Graphs and Maps using R @ NIH
Biomedical Bioinformatics RPlatform RGraphs NGS News
9 months ago by AABI ▴ 120
6
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7
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477
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News: NCBI wants to remove quality scores from SRA
SRA quality scores genome Assembly trimming News
updated 9 months ago by 99k • written 9 months ago by ▴ 20
0
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179
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News: Cellosaurus release 35 is available
knowledgebase news cell line News
9 months ago by Amos Bairoch ▴ 110
2
votes
2
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192
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News: Free online seminars/journal club
bioinformatics seminars journal clubs Forum News
9 months ago by kuan-lin.huang ▴ 40
0
votes
0
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307
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News: NGS Data Analysis Trainings (Classroom and Online)
RNA-Seq DNA-Seq Training News
9 months ago by David Langenberger 9.6k
0
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0
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306
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News: Summer School in Bioinformatics (ONLINE, 7th-11th September 2020)
RNA-Seq genome Assembly SNP sequence News
9 months ago by carlopecoraro2 ★ 2.0k
0
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0
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336
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News: ONLINE COURSE. Eukaryotic genome assembly USING Pacbio and Hi-C
assembly pacbio long-reads HI-C News
9 months ago by carlopecoraro2 ★ 2.0k
0
votes
0
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323
views
News: A Practical Introduction to NGS Data Analysis - America Online Edition
DNA-Seq workshop NGS News
10 months ago by David Langenberger 9.6k
0
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0
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216
views
News: Course on Deep Learning
DeepLearnig Python MachineLearning News
10 months ago by carlopecoraro2 ★ 2.0k
2
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0
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238
views
News: Webinar in next hour : Updated BLAST RefSeq rRNA databases for identification and phylogenetic analysis
blast News
10 months ago by GenoMax 99k
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votes
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164
views
News: Final Reminder for the precisionFDA Truth Challenge V2 Submissions
genome News
10 months ago by stephens_sarah ▴ 150
0
votes
0
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243
views
News: Statistical Computing for Environmental Science with R and Rstudio
Course online Rproject Rstudio statistics News
10 months ago by Transmitting Science communication • 0
0
votes
0
replies
256
views
News: Introduction to Bayesian Inference in Practice
Bayesian MCMC Python R statistics News
10 months ago by Transmitting Science communication • 0
1
vote
0
replies
239
views
News: Utrecht Bioinformatics Center: online seminars
epigenomics DNA damage bioinformatics Utrecht News
10 months ago by Sergio Martínez Cuesta ▴ 170
0
votes
0
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475
views
News: ONLINE COURSE Introduction to R for ecologists and evolutionary biologists (IRFB04) This course will be delivered live
R News
updated 10 months ago by 99k • written 10 months ago by ▴ 90
1
vote
3
replies
416
views
News: 4th Berlin Summer School in NGS Data Analysis - October 5-9, 2020
NGS RNA-Seq DNA-Seq News
10 months ago by David Langenberger 9.6k
0
votes
0
replies
203
views
News: Extension Announcement for the precisionFDA Truth Challenge V2
genome News
10 months ago by stephens_sarah ▴ 150
2
votes
0
replies
219
views
News: Introduction to NGS data analysis - ONLINE 7th-11th September 2020
RNA-Seq Assembly next-gen assembly sequencing News
10 months ago by carlopecoraro2 ★ 2.0k
0
votes
0
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267
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News: Last chance to register for online RNA-Seq Workshop June 1-4
RNA-Seq News
10 months ago by najoshi ▴ 30
1,189 results • Page 2 of 24
Recent Votes
Is the union of cDNA sequences the exome?
Answer: Filter contig fasta file by GC content
Comment: R command worked yesterday, but stalls today?
Answer: R command worked yesterday, but stalls today?
Comment: How to combine 2 incomplete GTF
Answer: comprehensive bacterial phylogenetic tree with edge lengths for all of RefSeq or
Comment: How can I Extract Transposable element from a new genome assembly?
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Popular Question to arturo.marin • 0
Popular Question to marongiu.luigi ▴ 560
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Recent Replies
Comment: How to run SPAdes assembler with bam files? by GenoMax 99k
You should be able to use pipes to string those steps together samtools view -f 12 -F 256 aligned-sorted-deduplicated.bam | samtools s…
Comment: snap installation error by Gianluca • 0
I know this is an old thread but if anyone has the same problem I prefer to write it here because it is one of the first results in google.…
Comment: how to select peaks at not transcribed genes by Lila M ▴ 910
That is my concern... this is why I asked in here :)
Comment: how to select peaks at not transcribed genes by jared.andrews07 9.3k
In that case, wouldn't you consider all peaks to be associated with transcription? Even if your 232 peaks are not associated with genes, th…
Answer: Filter contig fasta file by GC content by GenoMax 99k
Try the following. seqkit fx2tab --name --only-id --gc contigs.fa | awk -F "\t" '{if ($2 < 35) print $1}' | xargs -n 1 sh -c 'seqki…
Comment: how to select peaks at not transcribed genes by Lila M ▴ 910
indeed, my IP was for Pol2
Comment: R command worked yesterday, but stalls today? by dariober 12k
...besides, [wget](https://www.gnu.org/software/wget/manual/wget.html) has a `-c/--continue` option to resume the download of a partial fil…
Comment: how to select peaks at not transcribed genes by jared.andrews07 9.3k
What makes you think genes with a peak are transcribed while those without are not? Unless your IP was for Pol2, this is an overly simplist…
Comment: How to combine 2 incomplete GTF by rafaelsolersanblas ▴ 70
Thank you! I am going to try it :)
Comment: How to combine 2 incomplete GTF by GenoMax 99k
Please create a new environment when installing packages. That avoids conflicts. conda create -c bioconda -n agat agat conda acti…
Comment: How to combine 2 incomplete GTF by rafaelsolersanblas ▴ 70
Hi Juke, I am trying to install it and I can't. ![enter image description here][1] [1]: /media/images/bc08978b-10f7-4666-b385-57807b…
Comment: comprehensive bacterial phylogenetic tree with edge lengths for all of RefSeq or by cmo ▴ 70
I agree with you, Mensur, that the GTDB is arguably more reliable and comprehensive than NCBI. However, due to the relative greater longevi…
Comment: how to select peaks at not transcribed genes by Lila M ▴ 910
rigth, it is a ChIP seq analysis
Comment: how to select peaks at not transcribed genes by ATpoint 48k
Which type data are we talking about? What was the experiment? There are literally no details in this question right now. It the assay meas…
Comment: How to combine 2 incomplete GTF by rafaelsolersanblas ▴ 70
Thank yo so much Juke!
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