Limit : all time
all time today this week this month this year
1,000 results • Page 3 of 20
Sort: Votes
Rank Views Votes Replies
8
votes
1
reply
3.4k
views
News: LAST DAY TO REGISTER - NGS Workshop 2015: A Practical Introduction to NGS Data Analysis (Oxford, UK)
RNA-Seq workshop
updated 13 months ago by 43k • written 9.5 years ago by 11k
8
votes
0
replies
2.2k
views
News: A Call To Create Listings Of The Best Review Papers
papers
updated 14 months ago by 43k • written 11.7 years ago by 100k
8
votes
10
replies
4.0k
views
News: New versions of Minia and DSK (2.0.x)
minia dsk assembly gatb
updated 2.0 years ago by 43k • written 9.2 years ago by ★ 1.5k
8
votes
6
replies
1.5k
views
News: Illumina to Acquire Pacific Biosciences
pacbio illumina
updated 11 months ago by 43k • written 5.5 years ago by 100k
8
votes
2
replies
2.3k
views
News: The bioinformatics chat is a new podcast about bioinformatics. In the first episode we discuss Scallop, a transcriptome assembler
podcast Assembly RNA-Seq
updated 11 months ago by 43k • written 7.0 years ago by ▴ 120
8
votes
2
replies
766
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
19 days ago by David Langenberger 11k
8
votes
0
replies
2.5k
views
News: De Novo Genome Assembly Using Next-Generation Sequence Data (8 - 10 February 2016)
Assembly Workshop DNA-Seq
updated 19 months ago by 43k • written 8.6 years ago by 11k
8
votes
0
replies
1.8k
views
News: Upcoming Workshop: Introduction to R in Biology
workshop R
updated 12 months ago by 43k • written 7.2 years ago by 11k
8
votes
4
replies
1.9k
views
News: supporting vg users on biostars
variation-graph genome vg vgteam
updated 10 months ago by 43k • written 4.6 years ago by ★ 2.4k
8
votes
2
replies
902
views
News: Save time and money through improved onboarding of your NGS data scientists
NGS data-analysis
updated 13 months ago by 43k • written 4.3 years ago by 11k
8
votes
6
replies
4.0k
views
News: Last Call: Upcoming Workshop - Rna-Seq Bioinformatics: A Practical Introduction
RNA-seq
updated 14 months ago by 43k • written 11.3 years ago by 11k
8
votes
3
replies
1.8k
views
News: Impact of outdated gene annotations on pathway enrichment analysis
pathway-enrichment gene-ontology david go
updated 12 months ago by 43k • written 7.6 years ago by 5.1k
8
votes
1
reply
1.8k
views
News: Clustered `nr` database is now available for web blast @NCBI
nr blast
updated 2.2 years ago by ★ 27k • written 2.3 years ago by 141k
8
votes
1
reply
2.7k
views
News: An Interesting Article On Bioinformatics Education With Some Press For Biostar
meta biostars
updated 14 months ago by 43k • written 10.7 years ago by 11k
8
votes
0
replies
1.2k
views
News: Final Call - Hands-On RNA-Seq Data Analysis Workshop - only 2 seats left
data-analysis RNA-Seq workshop
updated 10 months ago by 43k • written 4.8 years ago by 11k
8
votes
8
replies
2.9k
views
News: Coronavirus Genome Analysis: a new volume in the Biostar Handbook
biostar-handbook education
updated 10 months ago by 43k • written 4.1 years ago by 100k
8
votes
0
replies
2.8k
views
News: Plos Computational Biology: Translational Bioinformatics
publications plos
updated 14 months ago by 43k • written 11.1 years ago by 9.7k
8
votes
0
replies
1.8k
views
News: Please help! IGB grant and survey
igb ChIP-Seq RNA-Seq genome
updated 24 months ago by 43k • written 9.2 years ago by ★ 2.4k
8
votes
6
replies
17k
views
News: Bioinformatics PhD Programs in the US
education PhD
updated 11 months ago by 43k • written 6.4 years ago by ▴ 70
7
votes
1
reply
2.7k
views
News: Integrated Genome Browser version 8.3 released - new native installer
ChIP-Seq RNA-Seq igv igb
updated 2.1 years ago by 43k • written 9.3 years ago by ★ 2.4k
7
votes
4
replies
2.7k
views
News: Boston Ma Us Area Folks: Software Carpentry Workshop For Women In Science Coming Up
python training
updated 14 months ago by 43k • written 11.0 years ago by 11k
7
votes
5
replies
2.6k
views
News: Physalia-Course: Introduction to Linux and workflows for biologists (Berlin)
next-gen Unix Assembly alignment
updated 11 months ago by 43k • written 7.1 years ago by ★ 2.5k
7
votes
3
replies
3.9k
views
News: Visualizing genomic data: techniques and challenges. Our interview with Dr. Malachi Griffith, Dr. Obi Griffith and Mr. Zachary Skidmore (The Griffith…
R RNA-Seq genome NGSdata
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
7
votes
0
replies
2.9k
views
News: Correction for "A benchmark for RNA-seq quantification pipelines"
RNA-seq
updated 12 months ago by 43k • written 7.9 years ago by ▴ 70
7
votes
11
replies
2.0k
views
News: Bringing the power of Big Data to biomedical researchers
NGS biomedical-research
updated 11 months ago by 43k • written 6.7 years ago by ▴ 100
7
votes
3
replies
4.6k
views
News: Pathway Commons 2 - Search And Visualize Public Biological Pathway Information. Single Point Of Access.
api cytoscape
updated 14 months ago by 43k • written 10.4 years ago by ★ 1.2k
7
votes
1
reply
3.1k
views
News: A Multi-Split Mapping Algorithm For Circular Rna, Splicing, Trans-Splicing, And Fusion Detection
ngs mapping
updated 13 months ago by 43k • written 10.2 years ago by 11k
7
votes
8
replies
1.9k
views
News: A new Stack Exchange site for Research Computing
unix linux
updated 11 months ago by 43k • written 6.4 years ago by ▴ 690
7
votes
1
reply
676
views
News: NGSymposium - Conference in Computational Biology, 23-24.09
ML statistics conference ngschool
23 months ago by kzkedzierska ▴ 290
7
votes
0
replies
3.2k
views
News: Ncbi E-Utilities Now Provides Output In Json Format (Einfo, Esearch, And Esummary Only, For Now)
ncbi format eutils entrez
updated 20 months ago by 43k • written 10.2 years ago by 161k
7
votes
2
replies
2.3k
views
News: Upcoming Hands-On Workshop: microRNA Analysis Using Next-Generation Sequencing
NGS microRNA workshop
updated 12 months ago by 43k • written 7.9 years ago by 11k
7
votes
2
replies
1.1k
views
News: NGS Data Analysis Workshops 2024
scRNA-seq dna-seq rna-seq nextflow
3 months ago by David Langenberger 11k
7
votes
8
replies
4.1k
views
News: Next-Gen Sequencing Tutorials On Cubelp (Cranfield Bioinformatics Electronic Learning Platform)
genome chip-seq snp assembly
updated 18 months ago by 43k • written 10.7 years ago by ▴ 610
7
votes
0
replies
1.8k
views
News: Us Ethics Panel Reports On Dna Sequencing And Privacy
next-gen
updated 14 months ago by 43k • written 11.5 years ago by 11k
7
votes
0
replies
1.5k
views
News: First PacBio Sequel data available
pacbio sequel
updated 12 months ago by 43k • written 7.6 years ago by 141k
7
votes
2
replies
2.3k
views
News: Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha processing events.
Drosha-processing moRNAs pri-miRNAs zebrafish
updated 21 months ago by 43k • written 8.3 years ago by ★ 2.4k
7
votes
0
replies
2.0k
views
News: CIViC Hackathon and Curation Jamboree at NGS in Molecular Pathology Meeting, NKI, Nov 30 - Dec 2
meeting civic hackathon NKI
updated 12 months ago by 43k • written 7.6 years ago by ▴ 290
7
votes
0
replies
1.0k
views
News: New layout for NCBI BLAST FTP database site starting February 4, 2020
ftp blast blast_index blast-plus
updated 10 months ago by 43k • written 4.3 years ago by 141k
7
votes
3
replies
1.9k
views
News: New NCBI Datasets home and documentation pages provide easier access
ncbi gene SARS-CoV-2 genome
updated 3.0 years ago by 100k • written 3.0 years ago by ▴ 50
6
votes
0
replies
2.7k
views
News: New Methods Section In Plos Computational Biology
publications plos
updated 14 months ago by 43k • written 11.1 years ago by 18k
6
votes
0
replies
2.8k
views
News: Broad Releases Fastg Multiple Seq Assembly Format
FASTG reference-format
updated 14 months ago by 43k • written 11.4 years ago by ★ 5.3k
6
votes
7
replies
2.2k
views
News: NCBI wants to remove quality scores from SRA
quality-scores trimming Assembly genome SRA
updated 10 months ago by 43k • written 3.8 years ago by ▴ 40
6
votes
1
reply
3.0k
views
News: The Art of Bioinformatics Scripting. A new book in the Biostar Handbook collection.
education
updated 3.6 years ago by • 0 • written 4.4 years ago by 100k
6
votes
2
replies
1.1k
views
News: Temporarily reduced functionality of Ensembl and Ensembl Genomes
Ensembl
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.4k
6
votes
0
replies
2.3k
views
News: Bioinformatics internships with Google Summer of Code 2019
intern Ensembl GSOC
updated 11 months ago by 43k • written 5.2 years ago by 23k
6
votes
1
reply
1.0k
views
News: uniprot.org is moving from HTTP to HTTPS
protein database uniprot
updated 11 months ago by 43k • written 6.3 years ago by ★ 2.4k
6
votes
9
replies
4.2k
views
News: 1000 Genomes : The Initial Phase 3 variant list and phased genotypes.
1000genomes
updated 13 months ago by 43k • written 9.8 years ago by 161k
6
votes
0
replies
1.5k
views
News: Now Live: precisionFDA Hidden Treasures - Warm Up Challenge
next-gen-sequencing
updated 11 months ago by 43k • written 6.8 years ago by ▴ 90
6
votes
4
replies
1.3k
views
News: Course online - Comparative Genomics
assembly genome next-gen alignment
updated 10 months ago by 43k • written 4.0 years ago by ★ 2.5k
6
votes
2
replies
1.5k
views
News: Biostars On The Genome Technology Cover
biostars
updated 14 months ago by 43k • written 11.3 years ago by 100k
1,000 results • Page 3 of 20
Recent Votes
Comment: alignment result
Comment: clustalo - align milions of short seq, memory issue
Answer: clustalo - align milions of short seq, memory issue
Comment: downloading genomes in fasta format from accession ids
Comment: PCA plot (Suggestions Needed)
Answer: PCA plot (Suggestions Needed)
PCA plot (Suggestions Needed)
Recent Locations • All
Poland, just now
Yalta, NBG-NSC, 1 minute ago
India, 1 minute ago
USA, 3 minutes ago
Pakistan, 3 minutes ago
Spain, 3 minutes ago
Singapore, 4 minutes ago
Recent Awards • All
Popular Question to anasjamshed ▴ 120
Popular Question to camillab. ▴ 160
Popular Question to Simone ▴ 10
Popular Question to carlopecoraro2 ★ 2.5k
Popular Question to daffodil ▴ 10
Popular Question to Russ ▴ 500
Popular Question to pramach1 ▴ 40
Recent Replies
Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in by b.contreras.moreira ▴ 170
You can try <https://github.com/inab/trimal>
Comment: To get p-values for the TPM by VITALA • 0
yes i want what rsem does and i did try with prior-enhanced option/pRSEM, but i think pRSEM is for chipseq data
Comment: alignment result by ahmad.sajad4541 • 0
Thank you so much. Should i proceed for annotation step?
Comment: PCA plot (Suggestions Needed) by swbarnes2 14k
The code you already posted in the bioconductor board had simulated data, and the PCA image is the same.
Answer: Network Alignment by Scooter ▴ 280
Unfortunately, it's not working for me either, and the web site doesn't exist anymore. You might try reaching out to the authors, but I kn…
Answer: How could I generate a gi_taxid_nucl.dmp file similar to the one previously host by ZhangYuanfeng • 0
JUST GIVE THE ANSWER! Here is the solution: ```bash aria2c -c -s 4 -j 4 \ https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/accession2taxid/pd…
Comment: PCA plot (Suggestions Needed) by Aaliya ▴ 10
I have actually used DESeq2 data.
Comment: Why cd-hit-est not work when sequence identity threshold<0.95？ by Dateline • 0
So, why? I have 18GB of data, and when -c=0.95, the run ends in about two days, while when -c=0.9, it has been three days and only a little…
Answer: Heatmap and rna-seq by Kevin Blighe 87k
Hi, you can take the list of GSEA pathways and then use these via GSVA (https://github.com/rcastelo/GSVA) to create a heatmap. You hav…
Comment: Clustering of DAVID gene enrichment results from gene expression studies by Kevin Blighe 87k
You will have to elaborate on what is the error
Comment: clustalo - align milions of short seq, memory issue by emmanouil.a ▴ 120
Hi GenoMax and Mensur Dlakic, thank you for your feedback. I'm changing approach in the way to work with a smaller number of seq.
Comment: Annovar using R package by Pierre Lindenbaum 161k
duplicate of your previous question: https://www.biostars.org/p/9592646/ why using R when there are shell-based tools like VEP ? slivar , …
Comment: Trouble with Pilon installation by Lissa Cruz Saavedra • 0
Hi I am trying to install the software but I didn't find the way to clone from github. Could you help me with the pipeline of instruction…
Comment: Adding CB tag to bam file by swbarnes2 14k
I think both these programs are just adding the same tag to every line. I don't think either cares whether it's called RG or CB
Comment: PCA plot (Suggestions Needed) by swbarnes2 14k
Even if this was real data, the tiny numbers for the PC1 and PC2 indicate that the differences between the samples are all absolutely tiny.…
Traffic: 2375 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6