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898 results • Page
3 of 18
Sort: Views
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Views
Votes
Replies
3
votes
0
replies
1.9k
views
News:
Deep learning in GATK4
GATK4
deep-learning
GATK
updated 11 months ago by
Ram
43k • written 6.3 years ago by
vdauwera
★ 1.2k
0
votes
2
replies
1.9k
views
News:
Webinar: Multi-omics: Challenges, opportunities and application to biomarker discovery
biomarker
next-gen-sequencing
multiomics
cancer
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Persistent LABS
▴ 750
1
vote
0
replies
1.9k
views
News:
Trinity RNAseq Workshop in Berlin
next-gen
RNA-Seq
Assembly
updated 11 months ago by
Ram
43k • written 6.5 years ago by
carlopecoraro2
★ 2.5k
7
votes
8
replies
1.9k
views
News:
A new Stack Exchange site for Research Computing
unix
linux
updated 11 months ago by
Ram
43k • written 6.4 years ago by
tiagoantao
▴ 690
0
votes
0
replies
1.9k
views
News:
Workshop: Advanced Python for biologists
genome
Assembly
sequence
updated 11 months ago by
Ram
43k • written 7.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.9k
views
News:
Metabarcoding: Transforming the way in which biodiversity can be surveyed
next-gen-sequencing
blast
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
4
votes
4
replies
1.9k
views
News:
12th International Conference on Advancements in Bioinformatics and Drug Discovery
genome
Computational-Biology
updated 11 months ago by
Ram
43k • written 6.0 years ago by
bioinformatics
▴ 20
4
votes
1
reply
1.8k
views
News:
scRNA-seq data analysis Workshop in Berlin
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.4 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Physalia-courses: R courses in Berlin (Germany)
Dataviz
NGS
Statistics
R
updated 11 months ago by
Ram
43k • written 6.9 years ago by
carlopecoraro2
★ 2.5k
4
votes
1
reply
1.8k
views
News:
Bioinformatics Contest 2018
contest
updated 11 months ago by
Ram
43k • written 6.3 years ago by
ksenya1.618
▴ 40
0
votes
0
replies
1.8k
views
News:
Phylogenetic comparative methods for studying diversification and phenotypic evolution (PCME01)
R
updated 11 months ago by
Ram
43k • written 5.5 years ago by
oliverhooker
▴ 60
1
vote
0
replies
1.8k
views
News:
Advanced Python for biologists (APYB02)
genome
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.2 years ago by
oliverhooker
▴ 110
3
votes
0
replies
1.8k
views
News:
New web BLAST default parameters and search limits are now in place at NCBI
www-blast
blast
ncbi
updated 10 months ago by
Ram
43k • written 3.8 years ago by
GenoMax
141k
0
votes
0
replies
1.8k
views
News:
WORK SHOP Eukaryotic metabarcoding
blast
next-gen
gene
rna-seq
updated 11 months ago by
Ram
43k • written 6.9 years ago by
oliverhooker
▴ 110
0
votes
0
replies
1.8k
views
News:
Canadian Bioinformatics 2018 Workshop Series
R
RNA-Seq
SNP
Assembly
updated 11 months ago by
Ram
43k • written 6.3 years ago by
meyer.ann
▴ 30
1
vote
2
replies
1.8k
views
News:
Course: Applied Statistics and Bioinformatics with R and Bioconductor
Statistics
R
Metagenomics
Bioconductor
updated 11 months ago by
Ram
43k • written 6.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
2 Python courses in Berlin
next-gen
python
updated 11 months ago by
Ram
43k • written 6.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
April 17th - Bioinformatics Workshop for Clinicians and Biologists at the University of Nebraska Medical Center
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
elia.brodsky
▴ 340
11
votes
11
replies
1.8k
views
8 follow
News:
Python Data Visualization Course. Last 3 spots left
next-gen
updated 11 months ago by
Ram
43k • written 5.4 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Bioinformatic Analysis of Next Generation Sequencing Data @NIH,USA February 6-9, 2018
analysis
next-gen
seq-data
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
0
votes
0
replies
1.8k
views
News:
WORKSHOP **Metagenomics, metatranscriptomics, and multi'omics for microbial community studies **
Metagenomics
sequencing
metatranscriptomics
updated 11 months ago by
Ram
43k • written 6.2 years ago by
carlopecoraro2
★ 2.5k
2
votes
7
replies
1.8k
views
News:
Beyond pest control: What can we learn from parasites?
docking
heme
parasitism
in-silico
updated 11 months ago by
Ram
43k • written 5.1 years ago by
Michael
54k
0
votes
0
replies
1.8k
views
News:
Course: Metabarcoding of microbial communities. Berlin, 16-20 April 2018
Microbial-Communities
Metabarcoding
updated 11 months ago by
Ram
43k • written 6.4 years ago by
carlopecoraro2
★ 2.5k
5
votes
0
replies
1.8k
views
News:
Bioinformatics Contest 2019
bioinforussia
bioinfcontest
bioinfcontest2019
updated 11 months ago by
Ram
43k • written 5.4 years ago by
dashabalashova
▴ 50
1
vote
0
replies
1.8k
views
News:
Data Visualization with Python
next-gen
Python
updated 11 months ago by
Ram
43k • written 5.9 years ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
1.8k
views
News:
Workshop: Introduction to Python for biologists
genome
next-gen
gene
updated 11 months ago by
Ram
43k • written 7.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
1.8k
views
News:
Exponential growth of data in biomedicine needs a skilled and experienced workforce
R
biotech
gene
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Pine Biotech
▴ 70
0
votes
1
reply
1.8k
views
News:
Spatio-temporal Transcriptome of LncRNAs in Human Brain
Parkinson
lncRNA
Alzheimer
brain
transcriptome
updated 11 months ago by
Ram
43k • written 6.8 years ago by
lsp03yjh
▴ 860
0
votes
0
replies
1.8k
views
News:
Course: Introduction to Bioinformatics using Linux. Berlin, 12-16 March 2018
next-gen
alignment
Assembly
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
10
votes
4
replies
1.8k
views
News:
3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
NGS
RNA-Seq
DNA-Seq
updated 11 months ago by
Ram
43k • written 5.3 years ago by
David Langenberger
11k
1
vote
0
replies
1.7k
views
News:
Quantitative geographic ecology using R: modelling genomes, niches, and communities (QGER01)
R
updated 11 months ago by
Ram
43k • written 6.1 years ago by
oliverhooker
▴ 60
1
vote
1
reply
1.7k
views
News:
Bioinformatics for Beginners @NIH, (Bethesda, MD, USA) Feb 13 - 16, 2018
beginners
training
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
1
vote
0
replies
1.7k
views
News:
2018 Summer School for Computational Genomics
RNA-Seq
computational-genomics
updated 11 months ago by
Ram
43k • written 6.3 years ago by
scientificcomputingismms
▴ 10
0
votes
0
replies
1.7k
views
News:
Workshop on Next Generation Sequencing Data Analysis
next-gen
RNA-Seq
alignment
updated 11 months ago by
Ram
43k • written 6.7 years ago by
sujana
• 0
0
votes
0
replies
1.7k
views
News:
Metagenomics Workshop in October 2017 in Frankfurt, Germany
NGS
workshop
metagenomics
updated 11 months ago by
Ram
43k • written 6.8 years ago by
David Langenberger
11k
2
votes
1
reply
1.7k
views
News:
Meet Dr. Giovanni Marco Dall'Olio
NGS
training
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.1 years ago by
David Langenberger
11k
1
vote
2
replies
1.7k
views
News:
Workshop: Data analysis in high throughput biology. deadline today (2 places left)
next-gen
R
RNA-Seq
updated 11 months ago by
Ram
43k • written 7.0 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.7k
views
News:
Workshop: Practical GWAS using Linux and R (23-27 October 2017, Berlin)
GWAS
Linux
R
updated 11 months ago by
Ram
43k • written 6.6 years ago by
carlopecoraro2
★ 2.5k
1
vote
1
reply
1.7k
views
News:
2nd Berlin Summer School in NGS Data Analysis 2018
DNA-Seq
Workshop
NGS
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
David Langenberger
11k
0
votes
0
replies
1.7k
views
News:
Webinar: How one researcher analyze piRNAs from 7,000 TCGA samples
Cancer
RNA-Seq
piRNAs
Small-RNA
Webinar
updated 11 months ago by
Ram
43k • written 7.1 years ago by
kgosche
▴ 30
2
votes
0
replies
1.7k
views
News:
Call for Abstracts: BOSC 2019: Bioinformatics Open Source Conference
BOSC
Conference
Open-Source
updated 11 months ago by
Ram
43k • written 5.1 years ago by
Chris Fields
★ 2.2k
1
vote
2
replies
1.7k
views
News:
NCBI Datasets - try it out!
Assembly
refseq
genome
ncbi
updated 10 months ago by
Ram
43k • written 4.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
2
replies
1.7k
views
News:
Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
scRNAseq
webinar
rna-seq
single-cell
updated 10 months ago by
Ram
43k • written 5.0 years ago by
sonpham
▴ 580
2
votes
0
replies
1.7k
views
News:
Introduction to bioinformatics for DNA and RNA sequence analysis (IBDR01) - last few places
RNA-Seq
next-gen
workshop
updated 11 months ago by
Ram
43k • written 5.7 years ago by
oliverhooker
▴ 60
0
votes
0
replies
1.7k
views
News:
Introduction to Python for biologists (Berlin). 2-6 October 2017 in Berlin (Germany).Deadlline
Python
NGS
sequencing
blast
updated 11 months ago by
Ram
43k • written 6.7 years ago by
carlopecoraro2
★ 2.5k
2
votes
7
replies
1.7k
views
News:
Bioinformatics workshop or training courses
RNA-Seq
next-gen
ChIP-Seq
updated 11 months ago by
Ram
43k • written 5.7 years ago by
saj98
▴ 140
2
votes
0
replies
1.7k
views
News:
Course - Metabolomics - Berlin, 25-29 November 2019
Metabolomics
R
Bioconductor
updated 10 months ago by
Ram
43k • written 4.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
1.7k
views
News:
2 Days Hands on Workshop on Transcriptome-Seq Data Analysis
RNA-Seq
sequencing
SNP
Assembly
updated 11 months ago by
Ram
43k • written 6.9 years ago by
clovergenls
• 0
0
votes
0
replies
1.7k
views
News:
Integrative Genomic Viewer (IGV) works with Amazon S3
amazon
igv
updated 11 months ago by
Ram
43k • written 5.2 years ago by
Roman Valls Guimerà
▴ 620
0
votes
0
replies
1.7k
views
News:
Webinar: ChIP-Seq / ATAC-Seq Analysis and Integration with Gene Expression Data
webinar
RNA-Seq
ChIP-Seq
updated 11 months ago by
Ram
43k • written 5.6 years ago by
kgosche
▴ 30
898 results • Page
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Recent Replies
Comment: AGeNT LocatIt
by
barslmn
★ 2.1k
He is already giving 32G, 320G for marking duplicates for exome is excessive. Is there a specific reason for using the tool?
Comment: How to convert plink files to Hapmap Format
by
bk11
★ 2.3k
This looks good. Please try with using `--allow-no-sex flag` plink --bfile your_data_phenoUP --assoc --allow-no-sex --out your_data_ph…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
SC899359_PC75420_A05 SC899359_PC75420_A05 0 0 0 2 SC899360_PC75415_D01 SC899360_PC75415_D01 0 0 0 2 SC899361_PC75425_H05 SC899361_PC75425_H…
Comment: How to convert plink files to Hapmap Format
by
bk11
★ 2.3k
Please show me a few lines of phenotype updated .fam file. You can do `head your_data_phenoUP.fam` and paste result here. Please do not us…
Comment: GEMMA GWAS how to specify factor or numerical for covariates
by
Sofia
• 0
Hi, I don't have a solution to your question but I followed this tutorial and was helpful to me in my analysis https://youtu.be/NusV6duyvXs…
Comment: Is it possible to get a list of representative genomes from a past RefSeq releas
by
GenoMax
141k
Catalog file lists the genomes included. There seem to be 71365 unique items in field 2. 2 Bacteria WP_000018326.1 4459…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
yes sure ! ![enter image description here][1] [1]: /media/images/f0f94f6c-4387-4188-a1aa-19152a89
Answer: AGeNT LocatIt
by
Greg
• 0
Give it more memory. ~10x more memory, or whatever you can give it, I had samples that weren't even close to being done after 3.5 da…
Comment: Is it possible to get a list of representative genomes from a past RefSeq releas
by
Bertalan_Takacs
▴ 90
Thanks! I've already tried looking through these files, I need release 83. I am trying to find this information in the .catalog file of the…
Answer: Is it possible to get a list of representative genomes from a past RefSeq releas
by
GenoMax
141k
Possibly. You will need to know the RefSeq release version. Check in this directory: https://ftp.ncbi.nlm.nih.gov/refseq/release/release-ca…
Comment: How to convert plink files to Hapmap Format
by
bk11
★ 2.3k
Hey, can you please show me a few lines of your phenotype updated .fam file? I m seeing there are 7 columns in it, that might be the proble…
Comment: PCA plot (Suggestions Needed)
by
jkim
▴ 170
How much variance were explained by PC1 and PC2? It doesn't look like that the largest source of variation came from the genotype differenc…
Comment: How to trim transcripts using information from NCBI contamination screen report
by
Lada
▴ 30
Thank you and yes, I agree going step back is the best option but I am in a hurry at the moment so I just need to stick to the transcriptom…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
Thank you so much for helping me out! I did the steps you mentioned but still got the same issue as shown in the snapshot ![enter image des…
Comment: different FeatureCounts output for the same data
by
Istvan Albert
100k
Make sure you are using the same version of featureCounts, it has changed how it deals with paired end reads. The exact same command will p…
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