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1,000 results • Page
3 of 20
Sort: Votes
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Votes
Replies
7
votes
0
replies
1.9k
views
News:
CIViC Hackathon and Curation Jamboree at NGS in Molecular Pathology Meeting, NKI, Nov 30 - Dec 2
meeting
civic
hackathon
NKI
updated 8 months ago by
Ram
41k • written 7.3 years ago by
zlskidmore
▴ 290
7
votes
11
replies
1.8k
views
News:
Bringing the power of Big Data to biomedical researchers
NGS
biomedical-research
updated 6 months ago by
Ram
41k • written 6.3 years ago by
Paul Kutzner
▴ 100
6
votes
1
reply
2.8k
views
News:
GMOD Online Training 2014 coming up
galaxy
chado
gmod
annotation
updated 9 months ago by
Ram
41k • written 9.6 years ago by
Mary
11k
6
votes
4
replies
1.5k
views
News:
Genomic variation course at the EBI - Updated
Ensembl
1000Genomes
snps
variation
updated 8 months ago by
Ram
41k • written 7.7 years ago by
Emily
23k
6
votes
0
replies
5.2k
views
News:
Game Changer? Illumina Nextseq 500
illumina
updated 9 months ago by
Ram
41k • written 9.9 years ago by
IV
★ 1.3k
6
votes
0
replies
2.7k
views
News:
Broad Releases Fastg Multiple Seq Assembly Format
FASTG
reference-format
updated 9 months ago by
Ram
41k • written 11.0 years ago by
William
★ 5.2k
6
votes
0
replies
2.5k
views
News:
http://crackingthebiocode.github.io : Profiles of Computational Biologists & Bioinformaticians
career
updated 9 months ago by
Ram
41k • written 9.2 years ago by
Pierre Lindenbaum
158k
6
votes
7
replies
2.0k
views
News:
NCBI wants to remove quality scores from SRA
quality-scores
trimming
Assembly
genome
SRA
updated 5 months ago by
Ram
41k • written 3.4 years ago by
zhousun21
▴ 40
6
votes
2
replies
2.0k
views
News:
RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)
NGS
RNA-Seq
workshop
updated 6 months ago by
Ram
41k • written 6.4 years ago by
David Langenberger
10k
6
votes
2
replies
1.5k
views
News:
Biostars On The Genome Technology Cover
biostars
updated 9 months ago by
Ram
41k • written 10.9 years ago by
Istvan Albert
99k
6
votes
2
replies
2.4k
views
News:
Interested in de novo transcriptome assembly using Trinity? Check out our interview to Brian Haas
alignment
RNA-Seq
updated 7 months ago by
Ram
41k • written 6.7 years ago by
carlopecoraro2
★ 2.4k
6
votes
9
replies
4.1k
views
News:
1000 Genomes : The Initial Phase 3 variant list and phased genotypes.
1000genomes
updated 9 months ago by
Ram
41k • written 9.5 years ago by
Pierre Lindenbaum
158k
6
votes
2
replies
2.5k
views
News:
RNA-Seq Data Analysis Workshop in Berlin, Germany (full)
NGS
RNA-Seq
workshop
updated 7 months ago by
Ram
41k • written 7.0 years ago by
David Langenberger
10k
6
votes
5
replies
5.1k
views
News:
NCBI MagicBlast ( Short read mapper )
blast
ncbi
short-read
mapper
hts
updated 8 months ago by
Ram
41k • written 7.2 years ago by
Pierre Lindenbaum
158k
6
votes
13
replies
1.8k
views
News:
Ensembl reduced functionality: 10th March-16th April 2020
BLAT
VEP
Ensembl
service
updated 6 months ago by
Ram
41k • written 3.8 years ago by
Ben_Ensembl
★ 2.3k
6
votes
7
replies
5.2k
views
News:
Illumina Nextseq 500 And Hiseq X Ten: Newer Tech Lowering Cost Per Mbp
Illumina
updated 9 months ago by
Ram
41k • written 9.9 years ago by
support
▴ 640
6
votes
1
reply
1.8k
views
News:
Are protein domains indivisible?
Athropy
Domains
Proteins
updated 8 months ago by
Ram
41k • written 8.5 years ago by
Deepak Tanwar
★ 4.2k
6
votes
1
reply
2.8k
views
News:
"Oxford University Press to Publish NAR Genomics and Bioinformatics"
journal
updated 6 months ago by
Ram
41k • written 4.6 years ago by
Pierre Lindenbaum
158k
6
votes
1
reply
1.9k
views
News:
Contest: Antibody Marathon Match Problem: ABCSpeedup
contest
updated 8 months ago by
Ram
41k • written 8.9 years ago by
Pierre Lindenbaum
158k
6
votes
0
replies
2.6k
views
News:
New Methods Section In Plos Computational Biology
publications
plos
updated 9 months ago by
Ram
41k • written 10.7 years ago by
Casey Bergman
18k
6
votes
0
replies
2.2k
views
News:
Bioinformatics internships with Google Summer of Code 2019
intern
Ensembl
GSOC
updated 6 months ago by
Ram
41k • written 4.8 years ago by
Emily
23k
6
votes
0
replies
892
views
News:
CWL user support moving to https://cwl.discourse.group/; many thanks to Biostars for over 4 years of support!
cwl
thanks
updated 6 months ago by
Ram
41k • written 4.1 years ago by
Michael R. Crusoe
★ 1.9k
6
votes
2
replies
1.0k
views
News:
Temporarily reduced functionality of Ensembl and Ensembl Genomes
Ensembl
updated 6 months ago by
Ram
41k • written 4.8 years ago by
Ben_Ensembl
★ 2.3k
6
votes
3
replies
2.3k
views
News:
Become a Professional Biinformatician in NGS, Microarray in very fair price. Register for ArrayGen training program as soon as possible to get good a…
ChIP-Seq
next-gen
RNA-Seq
updated 7 months ago by
Ram
41k • written 6.8 years ago by
Seema
• 0
6
votes
2
replies
1.7k
views
News:
Belly Button Biodiversity Project Requests Your Analysis
biodiversity
project
updated 9 months ago by
Ram
41k • written 11.1 years ago by
Mary
11k
6
votes
4
replies
4.1k
views
News:
awesome-single-cell: a list of open-source single-cell analysis software and workshop materials
single-cell
RNA-Seq
updated 8 months ago by
Ram
41k • written 7.4 years ago by
Sean Davis
26k
6
votes
1
reply
970
views
News:
uniprot.org is moving from HTTP to HTTPS
protein
database
uniprot
updated 6 months ago by
Ram
41k • written 6.0 years ago by
Elisabeth Gasteiger
★ 2.3k
6
votes
1
reply
3.5k
views
News:
Symposium And Rna-Seq Data Analysis Workshop Charlotte May 13-14
RNA
RNA-seq
training
updated 9 months ago by
Ram
41k • written 9.7 years ago by
Ann
★ 2.4k
6
votes
1
reply
2.5k
views
News:
FastQC Version 0.11.1 released
genome
next-gen-sequencing
updated 9 months ago by
Ram
41k • written 9.5 years ago by
rtliu
★ 2.2k
6
votes
0
replies
1.8k
views
News:
Bioinformatics Contest 2017
contest
updated 7 months ago by
Ram
41k • written 6.9 years ago by
pavlov.ivan095
▴ 70
6
votes
4
replies
1.2k
views
News:
Course online - Comparative Genomics
assembly
genome
next-gen
alignment
updated 5 months ago by
Ram
41k • written 3.6 years ago by
carlopecoraro2
★ 2.4k
6
votes
0
replies
1.4k
views
News:
Now Live: precisionFDA Hidden Treasures - Warm Up Challenge
next-gen-sequencing
updated 6 months ago by
Ram
41k • written 6.4 years ago by
patriciareneecarter
▴ 90
6
votes
1
reply
1.9k
views
News:
Massively Differential Bias Between Two Widely Used Illumina Library Preparation Methods For Small Rna Sequencing
illumina
RNA-seq
updated 9 months ago by
Ram
41k • written 9.9 years ago by
David Langenberger
10k
6
votes
2
replies
2.2k
views
News:
Galaxy-specific Biostar Instance
galaxy
biostars
updated 9 months ago by
Ram
41k • written 9.6 years ago by
martenson
▴ 380
5
votes
0
replies
1.4k
views
News:
Bioinformatics in Google Summer of Code 2018
Ensembl
GSOC
updated 6 months ago by
Ram
41k • written 5.8 years ago by
Emily
23k
5
votes
2
replies
825
views
News:
The precisionFDA BioCompute Object App-a-thon has been extended to October 18!
BioCompute
challenge
updated 6 months ago by
Ram
41k • written 4.4 years ago by
hollystephens723
▴ 70
5
votes
0
replies
1.3k
views
News:
Bioconductor 2015 conference live tweeting and materials
bioconductor
R
updated 8 months ago by
Ram
41k • written 8.4 years ago by
Sean Davis
26k
5
votes
2
replies
4.5k
views
News:
GeneSCF (Gene Enrichment Tool): Advice to users
kegg
GeneSCF
GO
annotation
updated 9 months ago by
Ram
41k • written 6.9 years ago by
EagleEye
7.5k
5
votes
0
replies
2.0k
views
News:
Ebi Rdf Platform Launched Today
EBI
updated 9 months ago by
Ram
41k • written 10.2 years ago by
Pierre Lindenbaum
158k
5
votes
1
reply
1.3k
views
News:
Bioinformatics Contest 2017
Contest
updated 12 months ago by
Ram
41k • written 6.9 years ago by
venu
7.1k
5
votes
0
replies
880
views
News:
sharing BiocWorkshops 2018
limma
edgeR
DESeq2
RNA-seq
glimma
updated 6 months ago by
Ram
41k • written 5.3 years ago by
Bogdan
★ 1.4k
5
votes
1
reply
2.5k
views
News:
Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
programming
course
R
updated 9 months ago by
Ram
41k • written 9.1 years ago by
Laurent
★ 1.7k
5
votes
1
reply
1.5k
views
News:
2-day WORKSHOP on SNAKEMAKE
next-gen
updated 6 months ago by
Ram
41k • written 5.5 years ago by
carlopecoraro2
★ 2.4k
5
votes
3
replies
755
views
News:
March 13-16: Virtual Nextflow and nf-core training event in 5 languages
nf-core
pipeline
Nextflow
updated 8 months ago by
Maxime Garcia
▴ 330 • written 9 months ago by
Matthias Zepper
4.2k
5
votes
1
reply
1.7k
views
News:
Google Joins The Global Alliance For Genomics And Health
genomics
updated 9 months ago by
Ram
41k • written 9.8 years ago by
Pierre Lindenbaum
158k
5
votes
3
replies
2.0k
views
News:
Nhgri Meeting About Human Variation Analysis Live Streaming [Now Done]
next-gen
exome
variation
updated 9 months ago by
Ram
41k • written 11.2 years ago by
Mary
11k
5
votes
1
reply
1.1k
views
News:
Paid opportunity: need microbiome experts for a survey and test of robustness
survey
updated 9 months ago by
Ram
41k • written 3.1 years ago by
Jeremy Leipzig
22k
5
votes
0
replies
909
views
News:
Free online Ensembl REST API training
perl
rest-api
jupyter
python
ensembl
updated 6 months ago by
Ram
41k • written 5.0 years ago by
Emily
23k
5
votes
0
replies
3.0k
views
News:
Penn State now offers an Online Graduate Certificate: Applied Bioinformatics
bioinformatics-education
updated 9 months ago by
Ram
41k • written 9.3 years ago by
Istvan Albert
99k
5
votes
0
replies
1.6k
views
News:
New Bioconductor F1000Research Channel for publishing Bioconductor workflows
bioconductor
reproducible-research
updated 8 months ago by
Ram
41k • written 8.4 years ago by
Sean Davis
26k
1,000 results • Page
3 of 20
Recent Votes
Answer: Help with error scanpy
Answer: FastQC without yellow box
Answer: FastQC without yellow box
Answer: FVA on Sybil
De Novo assembler (in C, supports MPI parallelism) available for experimenting with
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
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Recent Replies
Comment: what should I do if I get a compromised sample of scRNA-seq data?
by
dsull
★ 5.1k
The knee plot is just one type of QC. I'd say just proceed with your analysis and see if you observe anything funky (analysis itself is a Q…
Comment: Annotation GTF/GFF Arabidopsis thaliana
by
enriquesan
• 0
...........
Comment: FastQC without yellow box
by
lobelino
• 0
Thank you for your answer.
Comment: FastQC without yellow box
by
lobelino
• 0
My question is Can I trust the statistics of my data I didn't get any yellow boxes, but I got high media values. Why I didn't get any yello…
Answer: FastQC without yellow box
by
ATpoint
78k
The box is the quartiles, the red line the median. Please google how to read a box plot. Your data is good in terms of base quality.
Comment: FastQC without yellow box
by
Ram
41k
What's your question?<a href="" title="Text added because biostars parser needs it"></a>
Comment: vcftools
by
Ram
41k
Deprecated tools don't just stop producing output/errors, that's now how deprecation works.
Comment: vcftools
by
Ram
41k
> couldn't get any output What does that mean? What did you see on the screen when you ran this command? Did the command run successfully …
Comment: ChatGPT optimized for bioinformatics questions
by
Ram
41k
Wait, tinybio seems more self-aware than I thought: > **You**: Why did you give me results pertaining to sarek when I never mentioned that…
Comment: ChatGPT optimized for bioinformatics questions
by
Ram
41k
Tested it with a simple question right now and I see this odd disclaimer: ![tinybio snapshot][1] It does go on to describe Xenome quite w…
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
by
btc347
• 0
Thank you both very much for your input! Below is some additional information related to the points you both brought up. - Regarding erro…
Answer: RNA-seq log2 fold change to linear
by
jared.andrews07
★ 16k
>Secondly, where can I find the error between biological replicates that was found in the RNA-seq experiment? I did not analyze the raw dat…
Comment: Finding human .vcf files online to download
by
eren.idil
▴ 10
I've downloaded them, however when I try to clean the data using my data preproccesing code, it states that the quality does not match. How…
Answer: ChatGPT optimized for bioinformatics questions
by
Sasha
▴ 760
Hey guys - I wanted to announce some pretty large updates for chat: - The new chat is hooked up to Pubmed. Basically - you'll be able…
Comment: Filling gaps in BAM file
by
hemr3
• 0
aDNA = ancient DNA. By gaps, I think I mean just sections of the genome where there was not sufficient coverage or data to produce reliable…
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