Limit : this year
all time today this week this month this year
1,000 results • Page 3 of 20
Sort: Rank
Rank Views Votes Replies
3
votes
3
replies
959
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
6 months ago by PeterC_NCBI ▴ 370
0
votes
0
replies
275
views
News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 6 months ago by 41k • written 6 months ago by ★ 2.4k
0
votes
0
replies
300
views
News: PROGRAMMING IN R : MOVING FROM BEGINNER TO ADVANCED
Programming Training R
6 months ago by carlopecoraro2 ★ 2.4k
1
vote
0
replies
667
views
News: NCBI BLAST+ 2.14.0 release includes faster protein and translation search options
NCBI BLAST
6 months ago by PeterC_NCBI ▴ 370
0
votes
0
replies
370
views
News: Get Your Science going in 10 Minutes with the Biostar Handbook!
education biostarhandbook
updated 6 months ago by 41k • written 6 months ago by 99k
0
votes
0
replies
312
views
News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Network-Analysis Bioconductor Systems-Biology
updated 6 months ago by 41k • written 7 months ago by ★ 2.4k
0
votes
0
replies
341
views
News: Course - Phylogenetic Comparative Methods in R
Comparative-Methods R Phylogenetics
updated 6 months ago by 41k • written 7 months ago by ★ 2.4k
0
votes
2
replies
1.0k
views
News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
7 months ago by David Langenberger 10k
1
vote
0
replies
361
views
News: Course - Statistics for biologists with R
Statistics R
7 months ago by carlopecoraro2 ★ 2.4k
0
votes
0
replies
404
views
News: GWAS course in June
GWAS
updated 6 months ago by 41k • written 7 months ago by ★ 2.4k
1
vote
1
reply
553
views
News: 20% Off - Bioinformatics Pipeline Development with Nextflow (May 15-17 in Leipzig, Germany)
NGS nextflow RNAseq pipelines DNAseq
7 months ago by David Langenberger 10k
0
votes
0
replies
376
views
News: Single-cell RNAseq with R/Bioconductor course
scRNAseq Bioconductor R
updated 6 months ago by 41k • written 7 months ago by ★ 2.4k
0
votes
0
replies
289
views
News: Environmental Metagenomics - 17-21 April
MAGs Metagenomics
updated 7 months ago by 41k • written 7 months ago by ★ 2.4k
1
vote
0
replies
363
views
News: Announcing the 3rd round of the Nextflow and nf-core mentorship
nf-core mentorship nf_core nextflow
updated 7 months ago by 41k • written 7 months ago by ▴ 450
1
vote
0
replies
358
views
News: New open access publication on ElasticBLAST in BMC Bioinformatics
NCBI ElasticBLAST BLAST
8 months ago by PeterC_NCBI ▴ 370
0
votes
0
replies
367
views
News: Pangenomics course in April!
Pangenomics Prokaryotic-Genomics
8 months ago by carlopecoraro2 ★ 2.4k
1
vote
0
replies
475
views
News: Talk from Aaron Lun on Orchestrating Single-Cell Analysis With Bioconductor
scrna-seq
updated 8 months ago by 41k • written 8 months ago by 78k
0
votes
0
replies
361
views
News: Cellosaurus release 45 is available
knowledgebase cell-line
updated 5 months ago by 41k • written 8 months ago by ▴ 110
0
votes
0
replies
308
views
News: Virtual RAD-seq Analysis Workshop!
workshops popgen genomics rad-seq
8 months ago by mia.nahom ▴ 10
0
votes
0
replies
636
views
News: The Canadian Bioinformatics Workshops are back for summer 2023
CBW training workshop
8 months ago by bioinformatics.ca • 0
0
votes
0
replies
338
views
News: ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j cypher graph knowledge
8 months ago by Stephen • 0
0
votes
0
replies
391
views
News: Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine declmed declarative icfp precision
7 months ago by Stephen • 0
0
votes
0
replies
341
views
News: Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian RProject course online
8 months ago by Sole • 0
0
votes
0
replies
344
views
News: course - Reproducibility in Bioinformatics
Docker Reproducibility
updated 8 months ago by 41k • written 8 months ago by ★ 2.4k
0
votes
2
replies
717
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 8 months ago by 41k • written 8 months ago by ★ 2.4k
10
votes
4
replies
1.1k
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 8 months ago by ▴ 30 • written 9 months ago by 10k
1
vote
0
replies
812
views
News: Summer School in Bioinformatics
Genomics Docker RNA-seq
updated 8 months ago by 41k • written 8 months ago by ★ 2.4k
1
vote
1
reply
558
views
News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
8 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
366
views
News: Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements TE Genome-Assembly
updated 8 months ago by 41k • written 8 months ago by ★ 2.4k
0
votes
0
replies
347
views
News: Environmental Metagenomics course
Environmental-Metagenomics
updated 8 months ago by 41k • written 8 months ago by ★ 2.4k
0
votes
0
replies
335
views
News: Course - GENERALIZED LINEAR MODELS in R
GLM R Generalised-Linear-Model
updated 6 months ago by 41k • written 8 months ago by ★ 2.4k
1
vote
0
replies
400
views
News: Virtual Single Cell RNA-seq Workshop
single genomics cell expression rna-seq workshop gene
9 months ago by mia.nahom ▴ 10
1
vote
0
replies
373
views
News: Advanced Bayesian statistics in R course
Statistics RegressionModeling Bayesian R
9 months ago by carlopecoraro2 ★ 2.4k
0
votes
0
replies
305
views
News: Course - INTRODUCTION TO THE ANALYSIS OF LONGITUDINAL DATA WITH R
Genomics LongitudinalData R
9 months ago by carlopecoraro2 ★ 2.4k
1
vote
0
replies
742
views
News: The GDC Legacy Archive is retiring soon.
genomic-data-commons tcga gdc
updated 9 months ago by 41k • written 9 months ago by ★ 1.1k
0
votes
0
replies
368
views
News: course MULTIVARIATE DATA ANALYSIS WITH R AND VEGAN
Vegan MULTIVARIATEDATAANALYSIS Statistics R
9 months ago by carlopecoraro2 ★ 2.4k
0
votes
0
replies
326
views
News: course - single-cell RNAseq with R/Bioconductor
Bioconductor single-cell genomics RNAseq
updated 8 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
0
replies
471
views
News: Course - Analysis of PROKARYOTIC PANGENOMES
Genomics Pangenomes
updated 9 months ago by 41k • written 9 months ago by ★ 2.4k
5
votes
3
replies
744
views
News: March 13-16: Virtual Nextflow and nf-core training event in 5 languages
nf-core pipeline Nextflow
updated 8 months ago by ▴ 330 • written 9 months ago by 4.2k
0
votes
1
reply
322
views
News: Courses in March. -still a few seats available
Bioconductor Genomics R
updated 9 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
0
replies
321
views
News: course - Next steps in applied Bayesian regression modeling
Statistics RegressionModeling Bayesian R
9 months ago by carlopecoraro2 ★ 2.4k
0
votes
0
replies
417
views
News: Introduction to GWAS course in June
GWAS R
updated 8 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
0
replies
665
views
News: Introduction to GWAS course (6th edition) - June, 5th-8th
GWAS R
updated 9 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
0
replies
294
views
News: Course - Version Control for Researchers
VersionControl GIT Github
9 months ago by carlopecoraro2 ★ 2.4k
0
votes
0
replies
442
views
News: Course - INTRODUCTION TO PYTHON PROGRAMMING FOR BIOLOGISTS
Programming Python
updated 9 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
0
replies
331
views
News: Eukaryotic Metabarcoding course
eDNA Metabarcoding
updated 9 months ago by 41k • written 9 months ago by ★ 2.4k
0
votes
3
replies
684
views
News: NCBI update complete. Aspera users please update your client.
NCBI Submissions GenBank
9 months ago by PeterC_NCBI ▴ 370
0
votes
0
replies
310
views
News: Course - Mass Spectrometry and Proteomics in R/Bioconductor
Bioconductor MassSpectrometry R Proteomics
10 months ago by carlopecoraro2 ★ 2.4k
1
vote
0
replies
509
views
News: Course - Machine Learning in R (for omics data)
Genomics omics MachineLearning R
10 months ago by carlopecoraro2 ★ 2.4k
2
votes
0
replies
357
views
News: Course - Reproducibility in Bioinformatics
Reproducibility
updated 9 months ago by 41k • written 10 months ago by ★ 2.4k
1,000 results • Page 3 of 20
Recent Votes
Comment: SPAdes error: finished abnormally, OS return value: 21
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
Comment: unicycler error : [Errno 13] Permission denied:
Comment: unicycler error : [Errno 13] Permission denied:
Answer: SPAdes error: finished abnormally, OS return value: 21
Comment: SPAdes error: finished abnormally, OS return value: 21
Removing UMI with UMI tools?
Recent Locations • All
San Francisco, 1 minute ago
United States, 1 minute ago
Australia, 5 minutes ago
United States, 6 minutes ago
Canada, 7 minutes ago
Macao, 9 minutes ago
United States, 11 minutes ago
Recent Awards • All
Popular Question to O.rka ▴ 710
Popular Question to Daniel ▴ 30
Popular Question to prasundutta87 ▴ 660
Popular Question to RNAseqer ▴ 250
Scholar to Devon Ryan 104k
Scholar to Pierre Lindenbaum 158k
Teacher to Trivas ★ 1.5k
Recent Replies
Comment: bwa mem hangs after a few thousand reads by GenoMax 136k
> I am running this on a HPC cluster. This is a guess but if you are actually running this on a cluster then it is possible that you need …
Comment: Discrepancy in total number of bases in trimmed read1 and read2 files after BBDu by GeneBC12 • 0
Thanks GenoMax for the reply. That being said, does this difference in total bases between read1 and read2 have an effect in subsequent rea…
Comment: CHIPSEQ : Cut AND Run , DiffBind Parameters by DINESHR • 0
Here are my PCA results plotted through Diffbind and Correlation heat map by deeptools shows some clustering in the samples @atpoint ![e…
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres by dsull ★ 5.0k
Yeah, sometimes it looks "prettier" to plot p-value rather than adjusted p-value; although either one is technically ok to plot (even multi…
Comment: How to get unaligned reads and aligned reads into separate files from SAM/BAM? by rpolicastro 12k
I suppose if you really wanted to do it in one pass pysam would be an option. Courtesy of ChatGPT with a few modifications, and tested to s…
Comment: frequency plot for peaks by Ankit ▴ 400
what is your txdb? can you explain your experiment in detail?
Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when by cmdcolin ★ 3.4k
paste the file in csv format and a R wizard might come along and help :)
Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when by rpolicastro 12k
Your intuition was correct. You want to make two separate data frames and join them on sample name. This code is untested but will probably…
Comment: Generate Read counts from bam file by ATpoint 78k
It has nothing to do with low complexity. You always map to the entire genome since the reads can come from the entire genome. If you take …
Comment: CHIPSEQ : Cut AND Run , DiffBind Parameters by ATpoint 78k
DiffBind uses DESeq2 for differential analysis and its method to moderate logFCs. When noise is high and there is little evidence for diffe…
Comment: p-value combination methods by dsull ★ 5.0k
Was this response written by a LLM? It's a useful response but it doesn't really answer the initial question... In response to the OP ques…
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres by RNAseqer ▴ 250
Well, because I want to also draw attention to nominally significant genes as they are subjected to follow up experiments and would be nice…
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres by Nitin Narwade ★ 1.5k
Actually, to add an **EXACT line/mark** for one value based on another is impossible (for me at least). What you can do is, select the min…
Comment: Construction of single sequence assembly out of contigs by analyst ▴ 10
Thanks colindaven!
Comment: Generate Read counts from bam file by Enrique • 0
Great appreciation. If you don't use restrictive arguments in the mapping, is better to use the entire genome to avoid the false positives …
Traffic: 1616 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6