Limit : all time
all time today this week this month this year
1,000 results • Page 3 of 20
Sort: replies
Rank Views Votes Replies
19
votes
4
replies
2.1k
views
News: How to analyze NGS data: An overview of nine different IT solutions
NGS RNA-Seq DNA-Seq
updated 7 weeks ago by 39k • written 6.6 years ago by 9.9k
10
votes
4
replies
742
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 10 weeks ago by ▴ 30 • written 3 months ago by 9.9k
4
votes
4
replies
1.4k
views
News: VCFclin working group
vcfclin
updated 12 weeks ago by 39k • written 9.1 years ago by ▴ 30
3
votes
4
replies
2.1k
views
News: Training in Metagenomics Data Analysis @NIH, USA, Nov 14 - 17, 2017
metagenomics microbiome training
updated 7 weeks ago by 39k • written 6.6 years ago by ▴ 130
15
votes
4
replies
4.1k
views
News: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
dataviz GenVisR next-gen R
updated 6 weeks ago by 39k • written 6.2 years ago by ★ 2.3k
12
votes
4
replies
1.7k
views
News: #NGSchool2018 summer school in bioinformatics
NGSchool Personalised-Medicine Nanopore
updated 8 days ago by 39k • written 5.0 years ago by ▴ 290
3
votes
4
replies
1.8k
views
News: OmicCircos was updated
R OmicCircos
updated 12 months ago by 39k • written 8.2 years ago by ▴ 50
9
votes
4
replies
3.4k
views
News: Conference Announcement - Camda 2013
conference classification
updated 3 months ago by 39k • written 10.4 years ago by ▴ 240
6
votes
4
replies
1.4k
views
News: Genomic variation course at the EBI - Updated
Ensembl 1000Genomes snps variation
updated 8 weeks ago by 39k • written 7.2 years ago by 23k
0
votes
4
replies
553
views
News: Ensembl Release 104 and newer GTF files no longer have genes sorted by position
Ensembl GTF
updated 5 months ago by ★ 2.2k • written 6 months ago by ▴ 10
0
votes
4
replies
1.8k
views
News: What NGS courses would you like us to prepare for 2016? (one week left)
NGS Survey Workshop
updated 9 months ago by 39k • written 7.5 years ago by 9.9k
6
votes
4
replies
4.0k
views
News: awesome-single-cell: a list of open-source single-cell analysis software and workshop materials
single-cell RNA-Seq
updated 7 weeks ago by 39k • written 6.9 years ago by 26k
18
votes
3
replies
2.2k
views
News: LAST CALL: Next-Generation Sequencing Data Analysis: A Practical Introduction (Frankfurt, Germany) - 2 seats left
DNA-Seq NGS Workshop Variant-Calling
updated 10 months ago by 39k • written 6.2 years ago by 9.9k
4
votes
3
replies
1.7k
views
News: How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications
ChIP-Seq RNA-Seq
updated 7 weeks ago by 39k • written 6.4 years ago by ▴ 350
15
votes
3
replies
6.5k
views
News: Top Bioinformatics Contributions Of 2013
bioinformatics
updated 3 months ago by 39k • written 9.5 years ago by ★ 1.1k
2
votes
3
replies
412
views
News: NCBI Comparative Genome Viewer now allows searches for genes across aligned assemblies
Browser NCBI Alignments Genome
5 months ago by PeterC_NCBI ▴ 260
0
votes
3
replies
1.0k
views
News: Less Than One Month Remaining until the Submission Deadline for Phase 1 of the NCTR Indel Calling from Oncopanel Sequencing Data Challenge!
oncopanel indel-calling
updated 5 months ago by 39k • written 11 months ago by ▴ 10
0
votes
3
replies
661
views
News: Nvidia Clara Parabricks is FREE for R&D
nvidia workflow gpu
updated 5 months ago by 2.7k • written 5 months ago by 154k
9
votes
3
replies
3.0k
views
News: New Human Genome Assembly (Grch38) Released
human-genome assembly
updated 3 months ago by 39k • written 9.4 years ago by 154k
3
votes
3
replies
3.6k
views
News: A Tale Of Next Generation Sequencing Platforms: Ion Torrent, Pacific Biosciences And Illumina Miseq
sequencing
updated 3 months ago by 39k • written 10.8 years ago by 98k
8
votes
3
replies
1.6k
views
News: fastp 0.22 released, with new FASTQ deduplication feature.
fastp
updated 21 months ago by 129k • written 21 months ago by ★ 2.4k
2
votes
3
replies
1.4k
views
News: GCCBOSC 2018: A Bioinformatics Community Conference Call for Abstracts
Galaxy-Community-Conference BOSC GCC
updated 12 days ago by 39k • written 5.3 years ago by ★ 2.2k
0
votes
3
replies
2.1k
views
News: Bioinformatics National Certification Examination (BINC)
BINC
updated 7 weeks ago by 39k • written 7.1 years ago by • 0
5
votes
3
replies
1.3k
views
News: Bioinfo-Core Conference Call, October 17, 2017 (11 am EDT USA, local times around world)
bioinfo-core
updated 10 weeks ago by 39k • written 5.8 years ago by 129k
3
votes
3
replies
525
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
14 days ago by PeterC_NCBI ▴ 260
3
votes
3
replies
1.9k
views
News: Workshop: Berlin. Data manipulation and visualization with Python. 13-17 March (Registration deadline is today!!)
next-gen RNA-Seq genome SNP
updated 6 weeks ago by 39k • written 6.3 years ago by ★ 2.3k
1
vote
3
replies
567
views
News: NCBI BLAST ClusteredNR database now available for blastx and PSI-BLAST searches
PSI-BLAST blastx BLAST NCBI ClusteredNR
4 months ago by PeterC_NCBI ▴ 260
0
votes
3
replies
2.1k
views
News: Eukaryotic Metabarcoding workshop
next-gen blast alignment
updated 7 weeks ago by 39k • written 6.5 years ago by ★ 2.3k
2
votes
3
replies
2.8k
views
News: Summer Course On Analyzing Next-Generation Sequencing Data, June 10-20, Kellog Biological Station, Michigan State University
education
updated 3 months ago by 39k • written 10.3 years ago by 98k
3
votes
3
replies
778
views
News: Want to automate your NGS analyses and create reproducible/scalable pipelines? Join our hands-on Nextflow workshop!
nextflow NGS pipeline
13 months ago by David Langenberger 9.9k
20
votes
3
replies
2.4k
views
News: Nature Comment: Core services: Reward bioinformaticians
career-path
updated 11 months ago by 39k • written 8.2 years ago by ★ 2.2k
4
votes
3
replies
1.6k
views
News: Boston Genomics Hackathon (facilitated by NCBI)
NCBI RNA-Seq DNA-seq hackathon
updated 8 weeks ago by 39k • written 7.2 years ago by ▴ 330
0
votes
3
replies
2.6k
views
News: Physalia-courses: 16S rRNA gene Metabarcoding Workshop
RNA-seq sequencing SNP gene sequence
updated 7 weeks ago by 39k • written 6.6 years ago by ★ 2.3k
4
votes
3
replies
2.1k
views
News: India Recently Started Personal Genome Profiling, Commercially.
genome-profiling
updated 3 months ago by 39k • written 10.0 years ago by ▴ 970
7
votes
3
replies
3.6k
views
News: Visualizing genomic data: techniques and challenges. Our interview with Dr. Malachi Griffith, Dr. Obi Griffith and Mr. Zachary Skidmore (The Griffith…
R RNA-Seq genome NGSdata
updated 19 days ago by 39k • written 5.9 years ago by ★ 2.3k
2
votes
3
replies
1.2k
views
News: Bio-On-Magnetic-Beads (BOMB): Open platform for high-throughput nucleic acid extraction and manipulation
rna-extraction dna-extraction rna-seq
updated 7 days ago by 39k • written 4.7 years ago by ▴ 20
5
votes
3
replies
1.3k
views
News: Top GitHub repos for biomedicine
open-source software GitHub
updated 5 days ago by 39k • written 4.4 years ago by ▴ 50
8
votes
3
replies
1.6k
views
News: Impact of outdated gene annotations on pathway enrichment analysis
pathway-enrichment gene-ontology david go
updated 7 weeks ago by 39k • written 6.7 years ago by 5.1k
4
votes
3
replies
3.0k
views
News: CAFE v4.0 available
phylogenetics CAFE
updated 20 days ago by 39k • written 6.2 years ago by ▴ 150
9
votes
3
replies
4.5k
views
News: Bioinformatics Contest 2020. Call for problems
contest News
3.3 years ago by alserg ▴ 830
4
votes
3
replies
2.7k
views
News: -max_target_seqs 1 in NCBI standalone BLAST does not do what you think it does
blast
updated 6 days ago by 39k • written 4.6 years ago by 11k
14
votes
3
replies
3.4k
views
News: Updated: Conference/Symposium/Seminar/Workshop alert 2018-2019
seminar symposium conference
updated 8 days ago by 39k • written 5.0 years ago by 5.7k
6
votes
3
replies
2.2k
views
News: Become a Professional Biinformatician in NGS, Microarray in very fair price. Register for ArrayGen training program as soon as possible to get good a…
ChIP-Seq next-gen RNA-Seq
updated 6 weeks ago by 39k • written 6.3 years ago by • 0
1
vote
3
replies
929
views
News: 4th Berlin Summer School in NGS Data Analysis - October 5-9, 2020
NGS RNA-Seq DNA-Seq News
3.0 years ago by David Langenberger 9.9k
4
votes
3
replies
1.8k
views
News: Proteomics and Genomics Submit your Research Journals
Research Genomics Journals Proteomics
updated 6 months ago by 39k • written 7.9 years ago by • 0
7
votes
3
replies
4.2k
views
News: Pathway Commons 2 - Search And Visualize Public Biological Pathway Information. Single Point Of Access.
api cytoscape
updated 3 months ago by 39k • written 9.5 years ago by ★ 1.2k
2
votes
3
replies
1.8k
views
News: PDX Models: Tumor-stroma interaction
transcriptome pdx R ChIP-Seq
updated 16 days ago by 39k • written 5.9 years ago by ▴ 70
12
votes
3
replies
2.2k
views
News: Google Summer of Code and Open Bioinformatics Foundation is looking for students
GSoC open-source
updated 8 weeks ago by 39k • written 7.2 years ago by 7.8k
22
votes
3
replies
2.7k
views
News: Biostar: 10,000 Question Milestone
meta
updated 3 months ago by 39k • written 10.0 years ago by 98k
5
votes
3
replies
499
views
News: March 13-16: Virtual Nextflow and nf-core training event in 5 languages
nf-core pipeline Nextflow
updated 10 weeks ago by ▴ 230 • written 3 months ago by 3.7k
1,000 results • Page 3 of 20
Recent Votes
A: GISTIC 2.0 Segment CN
A: GISTIC 2.0 Segment CN
GISTIC 2.0 Segment CN
GISTIC 2.0 Segment CN
A: WGCNA: Relating Eigenmodules to Clinical Traits Returns Matrix of NAs
WGCNA: Relating Eigenmodules to Clinical Traits Returns Matrix of NAs
Comment: including samples for which group is unknown to help adjust for another variable
Recent Locations • All
Italy, 2 minutes ago
South Korea, 3 minutes ago
Iran, 4 minutes ago
Istanbul, Turkey, 4 minutes ago
France, 8 minutes ago
Finland, 9 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 9 minutes ago
Recent Awards • All
Popular Question to JourneyToAbyss ▴ 200
Popular Question to Rishabh Jha • 0
Teacher to ATpoint 72k
Great Question to linnet.roque6 ▴ 10
Popular Question to mbk0asis ▴ 660
Student to Sian ▴ 30
Popular Question to Sara ▴ 220
Recent Replies
Answer: BioInformatics, Software by barslmn ★ 1.5k
https://bio.tools/ is a great website indexing software used in bioinformatics.
Comment: BioInformatics, Software by Pierre Lindenbaum 154k
This is just too broad. what did you find so far ?
Answer: How to calculate kinship matrix table from vcf file by barslmn ★ 1.5k
You can use the vcftools relatedness2 module. Which implements the method describes in the paper: https://academic.oup.com/bioinformatics/a…
Answer: How to convert bed file to vcf? by Pierre Lindenbaum 154k
use AWK, change the header, body according to your needs... awk 'BEGIN {printf("##fileformat=VCFv4.2\n##INFO=<ID=END,Number=1,Type=I…
Comment: Doubt - installing LncTar software by Jeremiah • 0
It is the full result, there is only one lncRNA and one mRNA in Examp1, and the output file is just like web version reult
Comment: How to get a comperative result of 2 bed files? by Pierre Lindenbaum 154k
convert the bed to vcf and use truvari.
Comment: bioinformatic analysis protocol performed by CD Genomics by barslmn ★ 1.5k
Mail their representative you talked with before or their support and ask them. There may not be a citable source. However, you can write t…
Comment: How to get a comperative result of 2 bed files? by herh • 0
Actually, I am asked to use [truvari tool][1] but it works with vcf datasets. So, indeed I need a benchmarking measurement. One bed file is…
Comment: Building Dict File for GATK by dare_devil ★ 3.1k
Make sure that you have installed GATK in your system. Then follow the commands: For example, to generate `.dict` for `Homo_sapiens_assemb…
Comment: Precision-recall curve to compare metagenome classifiers to a gold standard - Is by sneha.d • 0
Hi, I'm trying to construct a similar curve using Kraken2 and Bracken report files. I'm trying to use the sklearn.metrics.precision_recall_…
Comment: How to convert *.hic file to *.mcool file? by NikhilP ▴ 20
Thanks I'll check that too. Actually I found a way to add weight column in the converted mcool file by using cooler package.
Answer: What is NCBI Gene ID, where to find it and how to convert to entrez ID? by Pegasus ▴ 90
Hi, I am facing the exact issue, have u had luck to solve it ? If yes, please share here. Thanks
Comment: including samples for which group is unknown to help adjust for another variable by Vincent Laufer ★ 2.8k
whether or not you should conduct a pooled analysis or a stratified analysis depends upon the ratio of between-group variance to within-gro…
Answer: BAM creation - vg surject vs vg mpmap output by Rachel • 0
From what I understand, there is indeed a difference. vg surject recomputes the alignment produced with the reference used to build the gra…
Comment: how to run FacetsSuite wrapper scripts on command line by GenoMax 129k
You need to replace `-foo --bar` with real options for the script. Those dummy names were just a demonstration of how you will provide thos…
Traffic: 2919 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6