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News: New NCBI Datasets home and documentation pages provide easier access
ncbi gene SARS-CoV-2 genome
updated 23 months ago by 97k • written 23 months ago by ▴ 50
2
votes
3
replies
1.7k
views
News: PDX Models: Tumor-stroma interaction
ChIP-Seq R pdx transcriptome News
5.7 years ago by Pine Biotech ▴ 70
2
votes
3
replies
1.4k
views
News: GCCBOSC 2018: A Bioinformatics Community Conference Call for Abstracts
BOSC GCC Galaxy Community Conference News
5.1 years ago by Chris Fields ★ 2.2k
8
votes
3
replies
1.5k
views
News: fastp 0.22 released, with new FASTQ deduplication feature.
fastp
updated 18 months ago by 127k • written 19 months ago by ★ 2.4k
6
votes
2
replies
1.4k
views
News: Biostars On The Genome Technology Cover
biostars
updated 5 weeks ago by 38k • written 10.2 years ago by 97k
0
votes
2
replies
3.0k
views
News: Course: Practical GWAS using Linux and R. 23-27 October 2017, Berlin (Germany)
GWAS R Linux Bioinformatics News
5.6 years ago by carlopecoraro2 ★ 2.3k
0
votes
2
replies
2.3k
views
News: PART FUNDED SCHOLARSHIPS - Coding, data management, and Shiny applications using RStudio for evolutionary biologists and ecologists - May 2017
R Rstudio Shiny apps News
6.0 years ago by oliverhooker ▴ 110
0
votes
2
replies
951
views
News: :: FINAL CALL :: Next-Generation Sequencing Data Analysis: A Practical Introduction (December 12-14, 2022 in Munich, Germany)
rnaseq dnaseq sequencing ngs workshop
4 months ago by David Langenberger 9.9k
6
votes
2
replies
869
views
News: Temporarily reduced functionality of Ensembl and Ensembl Genomes
Ensembl News
4.1 years ago by Ben_Ensembl ★ 2.2k
3
votes
2
replies
991
views
News: Course "Data Crunching: from hell to heaven", Udine, Italy, 25-27 July, 2018
next generation sequencing NGS News
4.8 years ago by Fabio Marroni ★ 3.0k
0
votes
2
replies
455
views
News: Seascape Genomics in R
Genomics Seascape R
updated 3 months ago by 38k • written 4 months ago by ★ 2.3k
3
votes
2
replies
820
views
News: BETA Testing Opportunity for new RNA-seq data analysis tool
beta rnaseq omics multi-omics ngs News
updated 4.2 years ago by 47k • written 4.2 years ago by • 0
0
votes
2
replies
660
views
News: Online Course - A Practical Introduction to NGS Data Analysis (February 01-03, 2023)
NGS DNAseq variant-calling RNAseq
8 weeks ago by David Langenberger 9.9k
1
vote
2
replies
365
views
News: Course: Network Analysis in R
NetworkAnalyis R
8 weeks ago by carlopecoraro2 ★ 2.3k
0
votes
2
replies
1.5k
views
News: 2 Days Hands on Workshop on Transcriptome-Seq Data Analysis
RNA-Seq sequencing SNP Assembly rna-seq News
5.8 years ago by clovergenls • 0
0
votes
2
replies
1.8k
views
News: NVIDIA GPU Conference sponsorship for Biostars + updated advertising terms
biostars meta
updated 11 months ago by 38k • written 8.1 years ago by 97k
3
votes
2
replies
1.0k
views
News: Genome Informatics meeting software list
software genomics informatics meetings News
5.4 years ago by Sean Davis 26k
13
votes
2
replies
1.1k
views
News: Thank you Biostars!
acknowledgement thank you biostars forum News
3.9 years ago by Glory Basumata ▴ 140
5
votes
2
replies
691
views
News: The precisionFDA BioCompute Object App-a-thon has been extended to October 18!
challenge BioCompute bioinformatics News
3.7 years ago by hollystephens723 ▴ 70
0
votes
2
replies
1.9k
views
News: Seqnews.Net: Discover And Share News On Next-Generation Sequencing
next-gen-sequencing
updated 28 days ago by 38k • written 10.3 years ago by 9.9k
2
votes
2
replies
1.2k
views
News: R 3.2.3 is out
R News
7.2 years ago by Antonio R. Franco ★ 5.0k
1
vote
2
replies
1.5k
views
News: Workshop: Data analysis in high throughput biology. deadline today (2 places left)
R next-gen RNA-Seq News
6.0 years ago by carlopecoraro2 ★ 2.3k
1
vote
2
replies
1.4k
views
News: NCBI Datasets - try it out!
ncbi refseq Assembly genome News
3.0 years ago by vkkodali_ncbi ★ 3.4k
1
vote
2
replies
2.0k
views
News: Workshop: Metagenomics, Metatranscriptomics, and multi'omics for microbial community studies (9-13 April 2018 in Berlin)
Metagenomics Bioinformatics Metatranscriptomics News
5.1 years ago by carlopecoraro2 ★ 2.3k
6
votes
2
replies
1.9k
views
News: RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)
RNA-Seq workshop NGS News
updated 5.7 years ago by • 0 • written 5.7 years ago by 9.9k
6
votes
2
replies
2.0k
views
News: Galaxy-specific Biostar Instance
galaxy biostars
updated 5 weeks ago by 38k • written 8.9 years ago by ▴ 380
0
votes
2
replies
1.4k
views
News: Free Webinar: Sequence alignment: the central step in reference based Next Generation Sequencing data analysis
next-gen alignment sangenix SAM News
6.2 years ago by Persistent LABS ▴ 750
15
votes
2
replies
10k
views
News: Breaking News - Illumina MiniSeq
next-gen-sequencing
updated 7 months ago by 38k • written 7.2 years ago by ★ 1.3k
9
votes
2
replies
14k
views
News: Bio-Linux 8 is now available
genome rna-seq alignment Assembly next-gen
updated 15 months ago by 38k • written 8.6 years ago by ★ 2.2k
2
votes
2
replies
1.9k
views
News: 2017 NIH SUMMER INTERNSHIP PROGRAM IN BIOMEDICAL RESEARCH (SIP)--applications open
training NIH News
6.4 years ago by Sean Davis 26k
2
votes
2
replies
2.3k
views
News: Interview Dealing with RADseq data: some tips from our instructors
RADseq NGS Bioinformatics News
updated 5.4 years ago by 97k • written 5.4 years ago by ★ 2.3k
11
votes
2
replies
1.3k
views
News: ASA discusses limitations of p-values what are the alternatives?
statistics p-value News
7.0 years ago by dariober 14k
6
votes
2
replies
2.2k
views
News: Interested in de novo transcriptome assembly using Trinity? Check out our interview to Brian Haas
rna-seq alignment RNA-Seq News
6.0 years ago by carlopecoraro2 ★ 2.3k
1
vote
2
replies
544
views
News: Ensembl reduced functionality, early March
ensembl service News
3.2 years ago by Emily 23k
10
votes
2
replies
3.0k
views
News: Biostars based Q&A for Bioconductor: http://support.bioconductor.org
RNA-Seq bioconductor
updated 14 months ago by 38k • written 8.5 years ago by 153k
3
votes
2
replies
3.5k
views
News: Course/Workshop: Informatics For Rna-Sequence Analysis (June, 2013)
RNA-seq
updated 28 days ago by 38k • written 10.2 years ago by 20k
8
votes
2
replies
654
views
News: Save time and money through improved onboarding of your NGS data scientists
NGS data-analysis
updated 6 days ago by 38k • written 3.2 years ago by 9.9k
11
votes
2
replies
3.4k
views
News: Coursera: Computational Molecular Evolution
course
updated 27 days ago by 38k • written 9.8 years ago by 153k
5
votes
2
replies
3.4k
views
News: Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser RNA-seq ChIP-seq
updated 22 days ago by 38k • written 9.4 years ago by ★ 2.3k
1
vote
2
replies
1.2k
views
News: Webinar on Diagnosis of Rare Diseases using NGS Based Multi-gene Testing- Case studies by Dr.Aparna Ganapathy on 18 Apr 2018
dna-seq variant calling rare disease strand ngs News
4.9 years ago by Genomics ▴ 70
1
vote
2
replies
550
views
News: New chat server (Discord) for bioinformatics
community
10 weeks ago by Samuel Lampa ★ 1.3k
3
votes
2
replies
2.4k
views
News: Samtools/htslib v1.2 released
htslib samtools bcftools
updated 8 days ago by 38k • written 8.1 years ago by 103k
1
vote
2
replies
1.3k
views
News: My own brand-new blog for bioinformatics learning
learning
updated 5 weeks ago by 38k • written 5.3 years ago by ▴ 100
1
vote
2
replies
566
views
News: Online training - Introduction to Nextflow
Bionfirmatics Pipeline Workflow Netflow
7 months ago by carlopecoraro2 ★ 2.3k
5
votes
2
replies
1.3k
views
News: Google Dataset Search
google News
updated 4.4 years ago by ▴ 10 • written 4.5 years ago by 153k
2
votes
2
replies
1.7k
views
News: BioC 2015, Bioconductor Annual Conference, July 20-22, Seattle, WA
Bioconductor Conference
updated 8 months ago by 38k • written 7.9 years ago by ★ 1.6k
0
votes
2
replies
490
views
News: Reduced functionality of Ensembl and Ensembl Genomes on the 13th November
ensembl downtime News
3.4 years ago by Emily 23k
2
votes
2
replies
2.4k
views
News: ENCODE 2015: Research Applications and Users Meeting
workshop mouse-encode encode
updated 2 days ago by 38k • written 7.8 years ago by 34k
1
vote
2
replies
1.4k
views
News: Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
single-cell rna-seq webinar scRNAseq News
3.9 years ago by sonpham ▴ 580
0
votes
2
replies
293
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 6 days ago by 38k • written 6 days ago by ★ 2.3k
1,000 results • Page 4 of 20
Recent Votes
Answer: How to generate GFF/GTF file from cDNA transcipts FASTA file?
Comment: bioinformatics problems solved by graphs data structure
Comment: bioinformatics problems solved by graphs data structure
Answer: How to analize multiple letters codes in COG IDs?
Answer: PCA in gene expression
Answer: PCA in gene expression
Comment: Enrichment analysis based on kegg for zebrafish
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Answer: BCFtools for somatic vs. germline variant calling by Ram 38k
bcftools does not differentiate. It calls variant loci. I don't think there's a single variant caller that calls both germline and somatic …
Comment: What means this Error when running a script in python?? by Ram 38k
Please format your code properly the next time. I've seen people use wrong formatting options to a reasonable extent, but your formatting w…
Comment: Gaia CNV error TCGA data by Ram 38k
1. Don't use people's names as tags. 2. Format your post properly. I've done what I can for now. 3. Add a link to "the tutorial from @kevin…
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
et mon français est assez bien pour comprendre ce que tu as écrit la ;-)
Comment: How to analize multiple letters codes in COG IDs? by Constanza • 0
Thanks for answering so fast, it was very helpful. I shouldn't pay much attention to if COGs are separated by a comma or not then. As long…
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
well, because this is not you guys' private forum, there are other people participating (not native french speaking) , just to give a reaso…
Answer: How to get gene from PSIBLAST resuts by lieven.sterck 14k
what you likely will need to do: 1. get the ID of the protein that you are interested in (out of result from PSIBLAST) 2. lookup that ID…
Answer: How to analize multiple letters codes in COG IDs? by Mensur Dlakic ★ 23k
The meaning of individual letters is described in a well-known COG functional code: https://ecoliwiki.org/colipedia/index.php/Clusters_o…
Comment: How to find promoter sequence of a gene? by sunyeping ▴ 40
The organism is mice.
Answer: How to generate GFF/GTF file from cDNA transcipts FASTA file? by Pierre Lindenbaum 153k
BLAT your cDNAs to the reference. This should be a PSL file that can be converted to a psl->gff3 converter (e.g: https://github.com/gperte…
Comment: RNAseq: same reads + more complete scaffold = fewer DEGs? by Darked89 4.2k
You may try to check what happened with DEGs obtained using the 300 fragments assembly by getting the sequences of these genes and comparin…
Comment: ExomeDepth installation error by Medha • 0
Thanks, that did work. Also in next steps, there are some arguments like bam.files, I was wondering do we require to have multiple bam fil…
Comment: ExomeDepth installation error by jared.andrews07 ★ 14k
No idea, I don't use databricks. I'd read the docs, find a local expert to help you out, or contact their support, likely in that order.
Comment: ExomeDepth installation error by Medha • 0
Hi @jaredandrews07 thanks for reverting back. I am new to R and just want to make sure ExomeDepth is working for the first time. For the Rs…
Comment: Embedded stop codon in translated nucleotide sequences in DAMBE by Mensur Dlakic ★ 23k
It is not obvious to me what exact steps you did here, but here is what I do know: there will always be stop codons even in open reading fr…
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