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News: course - DNA METHYLATION IN ECOLOGY AND EVOLUTION
Non-Model-Organisms DNA-Methylation BS-seq
updated 8 months ago by 43k • written 9 months ago by ★ 2.5k
2
votes
0
replies
541
views
News: Registration open for Nextflow Summit 2023, and free online Nextflow / nf-core training
nextflow
9 months ago by Marcel Ribeiro-Dantas ▴ 470
0
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0
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436
views
News: 2-day Course on Introduction to Nextflow
Workflow Reproducibility Nextflow
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
votes
0
replies
417
views
News: Physalia courses in September
Genomics R Data-Science
updated 9 months ago by 43k • written 9 months ago by ★ 2.5k
0
votes
0
replies
448
views
News: Cellosaurus release 46
knowledgebase cell-line cellosaurus
9 months ago by Amos Bairoch ▴ 120
0
votes
0
replies
336
views
News: Course - Data Manipulation and Visualization in Python
Data-Manipulation Data-Visualisation Python
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
0
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0
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496
views
News: Kindle edition of book NO LONGER available. Book available for free
Computational-Biology
10 months ago by sinha.shriprakash ▴ 20
0
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0
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498
views
News: Course on Generalised Linear Mixed Models in R
GLMM R Statistics Mixed-Models
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
0
votes
0
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456
views
News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Systems-Biology Network-Analysis Bioconductor
updated 8 months ago by 43k • written 10 months ago by ★ 2.5k
0
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0
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372
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News: course on Reproducibility data analysis with R
R Reproducibility Git Github
10 months ago by carlopecoraro2 ★ 2.5k
38
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8
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1.6k
views
6 follow
News: What happens when a bioinformatician has his own genome sequenced for $300?
DNAseq DNA WGS
updated 10 months ago by 35k • written 10 months ago by 11k
4
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0
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640
views
News: A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS RNA-Seq single-cell workshop
10 months ago by David Langenberger 11k
0
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0
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694
views
News: Hands-On NGS Data Analysis Courses 2023
RNA-seq DNA-seq Workshop
updated 10 months ago by 43k • written 10 months ago by 11k
1
vote
0
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500
views
News: Course - Introduction to Deep Learning for biologists
Genomics Deep-Learning Python NGS
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
1
vote
0
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433
views
News: Good bioinformatics training resources
NGS
updated 10 months ago by 161k • written 10 months ago by ▴ 80
0
votes
0
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539
views
News: Generalized Linear Models (GLM) course in R
R GLM statistics
10 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
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466
views
News: course - Advanced Python programming
Python Deep-Learning Machine-Learning
updated 8 months ago by 43k • written 11 months ago by ★ 2.5k
3
votes
2
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683
views
News: Participate in a NCBI/NIAID Virtual Codeathon: VCF Files for Population Genomics, Jul 31 - Aug 4, 2023
VCF SARS-CoV-2 NCBI Codeathon
11 months ago by PeterC_NCBI ▴ 410
0
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0
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416
views
News: Virtual Genome Annotation Workshop
annotation genome workshop
11 months ago by mia.nahom ▴ 10
0
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0
replies
682
views
News: Course - Longitudinal data analysis in R
Longitudinal-Data R Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
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0
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414
views
News: New version of ElasticBLAST (1.1.0) available from NCBI
ElasticBLAST BLAST. NCBI
11 months ago by PeterC_NCBI ▴ 410
0
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0
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378
views
News: Course - Introduction to CRISPR for Ecology and Evolution Studies
Genomics CRISPR
11 months ago by carlopecoraro2 ★ 2.5k
0
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0
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1.5k
views
News: GWAS course
GWAS R
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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484
views
News: Course - RNAseq data analysis with R/Bioconductor
R Tidyverse RNA-seq Bioconductor
updated 8 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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438
views
News: Course - Multiplex imagine analysis/ Spatial Omics
Multiplex-Image-Analysis Spatial-Omics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
3
votes
3
replies
1.2k
views
News: NCBI's IgBLAST version 1.21.0 is now available
IgBLAST BLAST T-Cell NCBI receptors
11 months ago by PeterC_NCBI ▴ 410
0
votes
0
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376
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 11 months ago by 43k • written 11 months ago by ★ 2.5k
0
votes
0
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389
views
News: PROGRAMMING IN R : MOVING FROM BEGINNER TO ADVANCED
Programming Training R
11 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
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843
views
News: NCBI BLAST+ 2.14.0 release includes faster protein and translation search options
NCBI BLAST
11 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
538
views
News: Get Your Science going in 10 Minutes with the Biostar Handbook!
education biostarhandbook
updated 11 months ago by 43k • written 11 months ago by 100k
0
votes
0
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392
views
News: Course - Network Analysis in Systems Biology with R/Bioconductor
R Network-Analysis Bioconductor Systems-Biology
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
votes
0
replies
435
views
News: Course - Phylogenetic Comparative Methods in R
Comparative-Methods R Phylogenetics
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
votes
2
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1.2k
views
News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
12 months ago by David Langenberger 11k
1
vote
0
replies
438
views
News: Course - Statistics for biologists with R
Statistics R
12 months ago by carlopecoraro2 ★ 2.5k
0
votes
0
replies
479
views
News: GWAS course in June
GWAS
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
1
reply
671
views
News: 20% Off - Bioinformatics Pipeline Development with Nextflow (May 15-17 in Leipzig, Germany)
NGS nextflow RNAseq pipelines DNAseq
12 months ago by David Langenberger 11k
0
votes
0
replies
462
views
News: Single-cell RNAseq with R/Bioconductor course
scRNAseq Bioconductor R
updated 11 months ago by 43k • written 12 months ago by ★ 2.5k
0
votes
0
replies
372
views
News: Environmental Metagenomics - 17-21 April
MAGs Metagenomics
updated 12 months ago by 43k • written 12 months ago by ★ 2.5k
1
vote
0
replies
454
views
News: Announcing the 3rd round of the Nextflow and nf-core mentorship
nf-core mentorship nf_core nextflow
updated 12 months ago by 43k • written 12 months ago by ▴ 470
1
vote
0
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436
views
News: New open access publication on ElasticBLAST in BMC Bioinformatics
NCBI ElasticBLAST BLAST
12 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
440
views
News: Pangenomics course in April!
Pangenomics Prokaryotic-Genomics
12 months ago by carlopecoraro2 ★ 2.5k
1
vote
0
replies
615
views
News: Talk from Aaron Lun on Orchestrating Single-Cell Analysis With Bioconductor
scrna-seq
updated 12 months ago by 43k • written 12 months ago by 81k
0
votes
0
replies
451
views
News: Cellosaurus release 45 is available
knowledgebase cell-line
updated 10 months ago by 43k • written 13 months ago by ▴ 120
0
votes
0
replies
402
views
News: Virtual RAD-seq Analysis Workshop!
workshops popgen genomics rad-seq
13 months ago by mia.nahom ▴ 10
0
votes
0
replies
744
views
News: The Canadian Bioinformatics Workshops are back for summer 2023
CBW training workshop
13 months ago by bioinformatics.ca • 0
0
votes
0
replies
412
views
News: ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j cypher graph knowledge
13 months ago by Stephen • 0
0
votes
0
replies
480
views
News: Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine declmed declarative icfp precision
12 months ago by Stephen • 0
0
votes
0
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421
views
News: Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian RProject course online
13 months ago by Sole • 0
0
votes
2
replies
883
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 13 months ago by 43k • written 13 months ago by ★ 2.5k
10
votes
4
replies
1.2k
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 13 months ago by ▴ 30 • written 14 months ago by 11k
1,000 results • Page 4 of 20
Recent Votes
Comment: Redirection of Duplicate PMIDs
Comment: Failed kmer content
Using vg gamsort with naive sorting algorithm
Answer: Using vg gamsort with naive sorting algorithm
Interested in Spatial Omics?
Interested in Spatial Omics?
Comment: Downsampling fastq file
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Comment: Subset Seurat object from Xenium spatial data by bk11 ★ 2.3k
For subsetting a sample, you can do something like this- Idents(seuratObj) <- "orig.ident" subj1 <- c("subject_1") subj1_seur…
Comment: Redirection of Duplicate PMIDs by LauferVA 4.2k
Ok! I have a recommendation. I'll submit it as an answer, pending your feedback. vincent
Comment: DYH17 Structure Prediction by anasjamshed ▴ 120
In modeller we need to use templates as well.so 63% is acceptable
Comment: DYH17 Structure Prediction by Ram 43k
Mensur said > The latter option assumes you know how to use Modeller Do you know how to use Modeller? I vaguely recall there being a mini…
Comment: Should I remove unlocalized scaffols in reference genome before alignment? by GenoMax 141k
OP is working with long reads so the chances of reads aligning to unlocalized scaffolds are relatively small. Doing some testing may be suf…
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks? by ATpoint 81k
I personally think that comparing the same peak between conditions is meaningful and comparing peaks within the same sample is not.
Comment: Should I remove unlocalized scaffols in reference genome before alignment? by ATpoint 81k
These regions are present in the genome and removing them might incorrectly redirect alignments to known genes. I don't see why you would r…
Comment: Should I remove unlocalized scaffols in reference genome before alignment? by njornet ▴ 20
Ok thank you! Do you know if there is an easy way of doing so with ncbi-genome-download or I need to use another tool?
Comment: Using vg gamsort with naive sorting algorithm by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: Redirection of Duplicate PMIDs by dominickd • 0
The scope is all publications related to grants from an NIH award program. There are currently ~120k publications in total (about a few hun…
Answer: Using vg gamsort with naive sorting algorithm by anovak ▴ 120
The `-d` sorting mode does the entire sort in memory, so it will only work if you have enough memory to load your whole GAM file. To fin…
Comment: Redirection of Duplicate PMIDs by dominickd • 0
I have a list of PMIDs for publications linked to a list of grants, exported from NIH RePORTER.
Comment: Plot DNA methylation level of DMR on the basis of certain genes by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: Should I remove unlocalized scaffols in reference genome before alignment? by GenoMax 141k
Yes you can remove those if you are only interested in annotated genes.
Comment: Help for coding: Trinity for differential gene expression studies by mchour • 0
[This could help][1] [1]: https://github.com/trinityrnaseq/RNASeq_Trinity_Tuxedo_Workshop/wiki/Trinity-De-novo-Transcriptome-Assembly-W…
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