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898 results • Page 6 of 18
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News: Online Live TScourse: Python Machine Learning in Biology (July 20th-24th, 2020)
online-course Python Machine-learning
updated 10 months ago by 43k • written 4.0 years ago by ▴ 70
2
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0
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656
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News: Online course - Introduction to Machine Learning in R -13-16 July 2020
Machine-Learning R
updated 10 months ago by 43k • written 4.0 years ago by ★ 2.5k
0
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0
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744
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News: Online Live TScourse: Introduction to Python for Biology (Transmitting Science) July 13th-17th, 2020
online-course progranming Python
updated 10 months ago by 43k • written 4.0 years ago by ▴ 70
0
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0
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649
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News: precisionFDA is launching the Truth Challenge V2: Calling Variants from Short and Long Reads in Difficult-to-Map Regions on May 1st!
gene genome
updated 10 months ago by 43k • written 4.0 years ago by ▴ 150
2
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0
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637
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News: Tailored online courses in R
Machine-Learning R tidyverse
updated 10 months ago by 43k • written 4.0 years ago by ★ 2.5k
0
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0
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638
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News: Reminder for the precisionFDA Detecting Adverse Event Anomalies Using FDA Open Data Challenge
R
updated 10 months ago by 43k • written 4.0 years ago by ▴ 150
6
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13
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2.1k
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News: Ensembl reduced functionality: 10th March-16th April 2020
BLAT VEP Ensembl service
updated 10 months ago by 43k • written 4.2 years ago by ★ 2.4k
2
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0
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518
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News: ONLINE COURSE-Advanced programming in R
R
updated 10 months ago by 43k • written 4.0 years ago by ★ 2.5k
2
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0
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815
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News: Landscape Genomics course ONLINE
snp R next-gen
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
1
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2
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1.7k
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News: NCBI Datasets - try it out!
Assembly refseq genome ncbi
updated 10 months ago by 43k • written 4.1 years ago by ★ 3.7k
1
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0
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1.3k
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News: Population Genomics course online
R SNP next-gen
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
4
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0
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1.4k
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News: ONLINE course - Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
next-gen-sequencing
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
2
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1
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2.6k
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News: RNAseq data analysis with R/ Bioconductor - ONLINE COURSE
R RNA-Seq Bioconductor
updated 10 months ago by 43k • written 4.1 years ago by ★ 2.5k
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550
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News: Results are now Available for the precisionFDA, George Washington University, and FDA/CBER HIVE BioCompute Object App-a-thon
R
updated 10 months ago by 43k • written 4.1 years ago by ▴ 150
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0
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810
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News: Training in Linux for Biomedical Researchers@NIH, USA,May 13-15,2020
Linux Training Biomedical Researchers Programming
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
6
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0
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969
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News: CWL user support moving to https://cwl.discourse.group/; many thanks to Biostars for over 4 years of support!
cwl thanks
updated 10 months ago by 43k • written 4.5 years ago by ★ 1.9k
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0
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589
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News: Deadline extended for the FDA Open Data Adverse Event Anomalies Challenge
R
updated 10 months ago by 43k • written 4.1 years ago by ▴ 150
0
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0
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749
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News: Cellosaurus release 34 is available
knowledgebase cell-line
updated 10 months ago by 43k • written 4.1 years ago by ▴ 120
1
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0
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617
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News: Calling Data Scientists and Bioinformaticians for the NHLBI Big Data Challenge Competition
Big-Data Challenge Competition
updated 10 months ago by 43k • written 4.1 years ago by ▴ 10
0
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0
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661
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News: Reminder for the FDA Open Data Adverse Event Anomalies Challenge
R
updated 10 months ago by 43k • written 4.1 years ago by ▴ 150
1
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0
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921
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News: Submit to ACM COMPASS 2020 -- Now with a Global Health Track - Deadline extended to March 8th!!
global-health public-health
updated 10 months ago by 43k • written 4.2 years ago by 18k
0
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0
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674
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News: Training in NCBI Resources for Biomedical Researchers @NIH
Resources NCBI Biomedical Researchers Programming
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
0
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0
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894
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News: New Courses @ Edinburgh Genomics
alignment GATK R RNA-Seq Python
updated 10 months ago by 43k • written 4.2 years ago by ▴ 40
2
votes
0
replies
541
views
News: Comparative Genomics course in Berlin
Assembly next-gen-sequencing alignment
updated 10 months ago by 43k • written 4.2 years ago by ★ 2.5k
0
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4
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1.0k
views
News: Pan-Structural Variation hackathon in the Cloud!
SV sequencing
updated 10 months ago by 43k • written 4.2 years ago by 9.7k
1
vote
1
reply
933
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News: Webinar on Extensive Assessment of Gene Fusion Detection, Prioritization, Annotation and Characterization on 11 March 2020
detection webinar RNA-Seq gene-fusion
updated 10 months ago by 43k • written 4.2 years ago by ▴ 40
0
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0
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615
views
News: Deadline extended for the FDA Open Data Adverse Event Anomalies Challenge
R
updated 10 months ago by 43k • written 4.2 years ago by ▴ 150
1
vote
0
replies
855
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News: hackseqRNA: Computational RNA hackathon, Vancouver BC
hackathon RNA
updated 10 months ago by 43k • written 4.2 years ago by ▴ 50
0
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0
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606
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News: PrecisionFDA FDA Open Data Challenge Reminder
R
updated 10 months ago by 43k • written 4.2 years ago by ▴ 150
9
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3
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4.8k
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News: Bioinformatics Contest 2020. Call for problems
contest
updated 10 months ago by 43k • written 4.6 years ago by ▴ 920
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0
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725
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News: Training in Bioinformatic Analysis of Next Generation Sequencing Data@NIH
Genomics RNA-Seq Biomedical next-gen
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
0
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0
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592
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News: Georgetown ICBI and precisionFDA Brain Cancer Challenge Final Reminder
R
updated 10 months ago by 43k • written 4.2 years ago by ▴ 150
0
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0
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585
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News: Training in Variant Analysis @NIH, March 23-26,2020
Variant-calling Variant-Analysis Genotype next-gen
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
0
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0
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545
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News: Phase 2 Data Now Available for the precisionFDA and Georgetown ICBI Brain Cancer Challenge
gene
updated 10 months ago by 43k • written 4.2 years ago by ▴ 150
0
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0
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769
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News: Training in Programming for Biomedical Researchers @NIH, USA,March 2-5,2020
Researchers Biomedical Programming
updated 10 months ago by 43k • written 4.3 years ago by ▴ 140
0
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0
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698
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News: Training in Creating Plots, Graphs and Maps using R @ NIH
RNA-Seq Biomedical next-gen
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
0
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0
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698
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News: Training in Advanced Transcriptomics (RNA-Seq) Analysis
Transcriptome-analysis RNA-Seq Biomedical next-gen
updated 10 months ago by 43k • written 4.2 years ago by ▴ 140
2
votes
0
replies
696
views
News: Population Genomics course
R SNP next-gen
updated 10 months ago by 43k • written 4.2 years ago by ★ 2.5k
7
votes
0
replies
1.0k
views
News: New layout for NCBI BLAST FTP database site starting February 4, 2020
ftp blast blast_index blast-plus
updated 10 months ago by 43k • written 4.3 years ago by 141k
1
vote
0
replies
704
views
News: Bioinformatics for Precision Oncology 2020 Program
cancer-biology RNA-Seq cancer
updated 10 months ago by 43k • written 4.2 years ago by ▴ 10
0
votes
0
replies
549
views
News: precisionFDA & Georgetown ICBI Brain Cancer Predictive Modeling Challenge Extension and New Incentive
genome
updated 10 months ago by 43k • written 4.2 years ago by ▴ 150
0
votes
0
replies
644
views
News: 2nd Workshop on Single-Cell Sequencing
single-cell sequencing
updated 10 months ago by 43k • written 4.2 years ago by • 0
1
vote
0
replies
638
views
News: New precisionFDA data science challenge: Help advance postmarket surveillance techniques for FDA regulated products
R
updated 10 months ago by 43k • written 4.3 years ago by ▴ 150
2
votes
0
replies
801
views
News: RNAseq data analysis with R and Bioconductor
R RNA-Seq RNA Bioconductor
updated 10 months ago by 43k • written 4.3 years ago by ★ 2.5k
2
votes
0
replies
1.3k
views
News: Introduction to genome-wide association studies (GWAS)
Unix GWAS R
updated 10 months ago by 43k • written 4.3 years ago by ★ 2.5k
0
votes
0
replies
671
views
News: Ensembl reduced functionality - Monday 20th January
Service Ensembl
updated 10 months ago by 43k • written 4.3 years ago by ★ 2.4k
1
vote
2
replies
757
views
News: Ensembl reduced functionality, early March
ensembl
updated 10 months ago by 43k • written 4.3 years ago by 23k
0
votes
0
replies
559
views
News: precisionFDA and Georgetown-ICBI Brain Cancer Predictive Modeling Challenge Submission Reminder
genome
updated 10 months ago by 43k • written 4.3 years ago by ▴ 150
0
votes
0
replies
677
views
News: Training in Molecular Modeling and Molecular Dynamics @NIH,February 18-21,2020
Structural-biology Modeling next-gen
updated 10 months ago by 43k • written 4.3 years ago by ▴ 140
2
votes
0
replies
611
views
News: 2-day Nextflow training course in Berlin
workflow nextflow
updated 10 months ago by 43k • written 4.3 years ago by ★ 2.5k
898 results • Page 6 of 18
Recent Votes
discoSnp - reference-free finding of isolated SNPs from non assembled reads
Comment: Figures are disappeared from html report of SnpEff
Answer: Figures are disappeared from html report of SnpEff
Comment: How to trim transcripts using information from NCBI contamination screen report
Filtering rRNA contamination (indicated by GC content plots) from RNA-seq data
Filtering rRNA contamination (indicated by GC content plots) from RNA-seq data
A: What is the VEP Impact column?
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Recent Awards • All
Popular Question to maxime.policarpo ▴ 200
Popular Question to Hamtaro ▴ 50
Popular Question to Nicolas Rosewick 11k
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Centurion to analyst ▴ 30
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Recent Replies
Comment: Is it possible to get a list of representative genomes from a past RefSeq releas by GenoMax 141k
At this point you should email NCBI help desk and ask them this question. If you get an answer then please post it back in this thread.
Comment: Figures are disappeared from html report of SnpEff by Pierre Lindenbaum 161k
the javascript in your html is deprecated or your firefox is just tool old.
Comment: Why gatk VariantAnnotator required bam and coverage files by Pierre Lindenbaum 161k
> I would like to ask why they may require the bam file for this function? hum.. if you want to add the coverage, where do you think gatk …
Comment: Figures are disappeared from html report of SnpEff by analyst ▴ 30
By following above approach I got this ![enter image description here][1] [1]: /media/images/b47490eb-d4c4-4f39-a7b2-f5b7b6b8
Comment: Highest variable features in single cell data by Kazo • 0
I apologize for the confusion. What I meant to say is that, for example, the Trbv17 gene appears among the variable genes. However, when I …
Answer: why renaming Idents in Seurat object doesn't work? by Assa Yeroslaviz ★ 1.8k
I manage to find a workwround, but I don't understand what I did wrong here. my solution was to extract the cluster column as vector and…
Answer: Finding orthologs between genome error by Adrian Altenhoff ★ 1.1k
Hi, thanks for letting us know. In a recent software update, we introduced a problem with the written splice information in the cached …
Comment: Fetch table from clinvar database according to a list of rsid by ashaneev07 ▴ 20
so which one should i prefer? i don't need the entire results i need the condition-Germline table only. (for eg:-from, https://www.ncbi.nlm…
Comment: To get p-values for the TPM by dsull ★ 5.8k
OK, not sure why your intention is to use RSEM p-values for, but at least tell us the commands you ran then otherwise how are we supposed t…
Comment: Fetch table from clinvar database according to a list of rsid by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: different FeatureCounts output for the same data by sehriban.buyukkilic ▴ 10
Sure, I'll inquire about the version of Rsubread. I'll keep you posted if it works :) Thanks
Comment: different FeatureCounts output for the same data by sehriban.buyukkilic ▴ 10
Yeah, let me show you my featureCounts result, it looks like this. It's too low. [1]: /media/images/eb8293fe-e6ae-4b02-92e2-0ba2075b
Comment: Adding CB tag to bam file by Pierre Lindenbaum 161k
samtools addreplacerg is for read groups. This is not what OP asked.
Comment: Adding CB tag to bam file by Maria • 0
When I try ``` samtools addreplacerg -r "@CB\tID:$cell" -o $cell.bam $LINE``` the CB tag gets add to the header, but the tag in every line …
Answer: Figures are disappeared from html report of SnpEff by Pierre Lindenbaum 161k
the remote website providing the javascript or/and the images is down or you're now behind a proxy. Check the firefox console: https://fire…
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