Showing: next-genreset
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311
votes
11
answers
109k
views
157 follow
11
answers
231
votes
15
answers
62k
views
77 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.0 years ago by Biomed4.5k • updated 4.3 years ago by Barry40
136
votes
17
answers
44k
views
113 follow
17
answers
Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 6.5 years ago by vijay1.5k • updated 9 months ago by MetaTK20
179
votes
16
answers
13k
views
25 follow
16
answers
I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 8.6 years ago by Pierre Lindenbaum120k • updated 5.8 years ago by sarahhunter600
105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.0 years ago by Matthieu430 • updated 3.2 years ago by alexisdereeper30
90
votes
7
answers
13k
views
60 follow
7
answers
158
votes
15
answers
40k
views
46 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 7.9 years ago by Panos1.7k • updated 4.7 years ago by bstrs0
65
votes
8
answers
26k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 9.0 years ago by brentp23k • updated 3.7 years ago by Malachi Griffith17k
60
votes
1
answer
4.8k
views
44 follow
1
answer
Tutorial: Informatics of RNA-Seq.
tutorial next-gen rna-seq written 3.8 years ago by geek_y9.6k • updated 3.6 years ago by Malachi Griffith17k
61
votes
6
answers
8.8k
views
25 follow
6
answers
63
votes
8
answers
19k
views
31 follow
8
answers
54
votes
2
answers
4.3k
views
41 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R next-gen tool karyoploter written 23 months ago by bernatgel1.9k • updated 12 months ago by Vijay Lakhujani4.1k
58
votes
18
answers
20k
views
35 follow
18
answers
51
votes
6
answers
23k
views
17 follow
6
answers
What Metrics Are Best To Describe The "Coverage" Of Rna-Seq Data?
sequencing rpkm next-gen rna data written 8.5 years ago by Bio_X2Y3.7k • updated 3.2 years ago by Biostar ♦♦ 20
65
votes
3
answers
27k
views
39 follow
3
answers
Read Group In Sam/Bam Files: What Do They Exactly Describe?
next-gen samtools bam written 7.1 years ago by Stefano Berri4.1k • updated 3.1 years ago by bshifaw50
125
votes
6
answers
126k
views
29 follow
6
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 2.7 years ago by jokipokemon00010
70
votes
5
answers
31k
views
17 follow
5
answers
About Paired-End Sequencing
short duplicates next-gen tool sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 8.1 years ago by Ketil3.9k
94
votes
15
answers
31k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 8.8 years ago by User 1586280 • updated 12 months ago by endrebak760
57
votes
4
answers
3.7k
views
9 follow
4
answers
71
votes
10
answers
15k
views
40 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 6.9 years ago by Prakki Rama2.2k • updated 9 months ago by Corentin260
45
votes
6
answers
9.8k
views
37 follow
6
answers
30
votes
2
answers
9.6k
views
2
answers
Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 2.6 years ago by martinguerrerog89270 • updated 11 weeks ago by david.peeney20
93
votes
5
answers
46k
views
27 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 8.3 years ago by Pierre Lindenbaum120k • updated 2.1 years ago by martin.triska110
55
votes
4
answers
20k
views
17 follow
4
answers
Forum: Attention: Bowtie2 And Multiple Hits
forum next-gen mapping bowtie written 6.6 years ago by David Langenberger8.8k • updated 6.6 years ago by dsbreak140
81
votes
9
answers
22k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 6.3 years ago by diltsjeri440 • updated 10 months ago by alslonik80
33
votes
5
answers
5.0k
views
13 follow
5
answers
Short Read Aligners/ Snp Calling Comparison
sequencing next-gen mapping snp comparison written 8.6 years ago by Pierre Lindenbaum120k • updated 5.4 years ago by Biostar ♦♦ 20
97
votes
16
answers
32k
views
51 follow
16
answers
Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 7.0 years ago by KS360 • updated 5 months ago by Shixiang30
81
votes
6
answers
46k
views
48 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 4.9 years ago by krithika.gu250 • updated 10 months ago by Fred073060
32
votes
6
answers
5.3k
views
6
answers
Single Cell RNAseq data analysis protocol
next-gen rna-seq sequencing written 2.9 years ago by Mike1.3k • updated 14 months ago by Biostar ♦♦ 20
33
votes
6
answers
24k
views
18 follow
6
answers
How To Extract Reads From Bam That Overlap With Specific Regions?
read next-gen bed sequencing bam coverage written 8.5 years ago by Stew1.4k • updated 5.1 years ago by Alex Reynolds28k
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