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332
votes
8
answers
117k
views
178 follow
8
answers
141
votes
17
answers
47k
views
118 follow
17
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Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 7.5 years ago by vijay1.5k • updated 21 months ago by MetaTK20
232
votes
15
answers
64k
views
78 follow
15
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What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 10.0 years ago by Biomed4.6k • updated 5.3 years ago by Barry40
91
votes
7
answers
14k
views
63 follow
7
answers
109
votes
8
answers
40k
views
54 follow
8
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Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 9.1 years ago by Matthieu460 • updated 4.2 years ago by alexisdereeper30
99
votes
17
answers
34k
views
53 follow
17
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Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 8.0 years ago by KS370 • updated 17 months ago by Shixiang50
84
votes
6
answers
56k
views
48 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 6.0 years ago by krithika.gu260 • updated 22 months ago by Fred073060
161
votes
15
answers
44k
views
47 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 8.9 years ago by Panos1.7k • updated 5.7 years ago by bstrs0
63
votes
1
answer
5.3k
views
46 follow
1
answer
Tutorial: Informatics of RNA-Seq.
tutorial next-gen rna-seq written 4.8 years ago by geek_y11k • updated 4.6 years ago by Malachi Griffith18k
75
votes
10
answers
17k
views
42 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 8.0 years ago by Prakki Rama2.4k • updated 21 months ago by Corentin450
65
votes
3
answers
30k
views
39 follow
3
answers
Read Group In Sam/Bam Files: What Do They Exactly Describe?
next-gen samtools bam written 8.1 years ago by Stefano Berri4.1k • updated 4.1 years ago by bshifaw50
47
votes
6
answers
11k
views
39 follow
6
answers
152
votes
11
answers
5.4k
views
37 follow
11
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Picking A Programming Language And Where To Begin
programming next-gen C subjective sequencing written 8.8 years ago by Travis2.8k • updated 8.3 years ago by Palani Kannan60
60
votes
18
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21k
views
37 follow
18
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84
votes
6
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23k
views
37 follow
6
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VCF files: Change Chromosome Notation
sequence next-gen written 6.1 years ago by Quak350 • updated 9 months ago by carmen.bugarin.diz0
130
votes
7
answers
136k
views
32 follow
7
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 10.1 years ago by Pierre Lindenbaum128k • updated 6 months ago by Renesh1.8k
57
votes
6
answers
41k
views
32 follow
6
answers
Estimate Insert Size In Paired-End/Mate-Pair
next-gen paired alignment sequencing written 8.4 years ago by Ric160 • updated 8.4 years ago by Ketil4.0k
28
votes
2
answers
6.4k
views
32 follow
2
answers
Best tool for variant calling
genome alignment next-gen snp written 2.0 years ago by williamsbrian5064250 • updated 18 months ago by claire0
63
votes
8
answers
20k
views
31 follow
8
answers
81
votes
9
answers
26k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 7.4 years ago by diltsjeri440 • updated 23 months ago by alslonik140
94
votes
15
answers
33k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 9.8 years ago by User 1586280 • updated 2.0 years ago by endrebak810
97
votes
5
answers
50k
views
28 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 9.3 years ago by Pierre Lindenbaum128k • updated 3.2 years ago by martin.triska120
58
votes
8
answers
21k
views
27 follow
8
answers
28
votes
6
answers
11k
views
27 follow
6
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CNV analysis tool on exome data for NGS
exome next-gen cnv bam written 6.1 years ago by subhajit06110 • updated 5.7 years ago by Christian2.9k
66
votes
8
answers
27k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 10.0 years ago by brentp23k • updated 4.7 years ago by Malachi Griffith18k
62
votes
7
answers
16k
views
26 follow
7
answers
179
votes
16
answers
13k
views
25 follow
16
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I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 9.6 years ago by Pierre Lindenbaum128k • updated 6.8 years ago by sarahhunter600
61
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6
answers
9.2k
views
25 follow
6
answers
60
votes
1
answer
18k
views
24 follow
1
answer
110
votes
5
answers
119k
views
23 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 9.9 years ago by Biomed4.6k • updated 6.6 years ago by Chris Miller21k
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