Showing: next-genreset
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311
votes
11
answers
109k
views
157 follow
11
answers
136
votes
17
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44k
views
113 follow
17
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Tutorial: Tools For Metagenomic Data Analysis
metagenomics next-gen tutorial written 6.5 years ago by vijay1.5k • updated 9 months ago by MetaTK20
231
votes
15
answers
62k
views
77 follow
15
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What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.0 years ago by Biomed4.5k • updated 4.3 years ago by Barry40
90
votes
7
answers
13k
views
60 follow
7
answers
54
votes
2
answers
4.3k
views
41 follow
2
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Tool: karyoploteR: uncircle your genomes
dataviz R next-gen tool karyoploter written 23 months ago by bernatgel1.9k • updated 12 months ago by Vijay Lakhujani4.1k
105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.0 years ago by Matthieu430 • updated 3.2 years ago by alexisdereeper30
179
votes
16
answers
13k
views
25 follow
16
answers
I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 8.6 years ago by Pierre Lindenbaum120k • updated 5.8 years ago by sarahhunter600
60
votes
1
answer
4.8k
views
44 follow
1
answer
Tutorial: Informatics of RNA-Seq.
tutorial next-gen rna-seq written 3.8 years ago by geek_y9.6k • updated 3.6 years ago by Malachi Griffith17k
93
votes
5
answers
46k
views
27 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 8.3 years ago by Pierre Lindenbaum120k • updated 2.1 years ago by martin.triska110
125
votes
6
answers
126k
views
29 follow
6
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What Is The Sequencing 'Depth' ?
next-gen sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 2.7 years ago by jokipokemon00010
158
votes
15
answers
40k
views
46 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 7.9 years ago by Panos1.7k • updated 4.7 years ago by bstrs0
65
votes
3
answers
27k
views
39 follow
3
answers
Read Group In Sam/Bam Files: What Do They Exactly Describe?
next-gen samtools bam written 7.1 years ago by Stefano Berri4.1k • updated 3.1 years ago by bshifaw50
55
votes
4
answers
20k
views
17 follow
4
answers
Forum: Attention: Bowtie2 And Multiple Hits
forum next-gen mapping bowtie written 6.6 years ago by David Langenberger8.8k • updated 6.6 years ago by dsbreak140
94
votes
15
answers
31k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 8.8 years ago by User 1586280 • updated 12 months ago by endrebak760
65
votes
8
answers
26k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 9.0 years ago by brentp23k • updated 3.7 years ago by Malachi Griffith17k
61
votes
6
answers
8.8k
views
25 follow
6
answers
57
votes
4
answers
3.7k
views
9 follow
4
answers
30
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2
answers
9.6k
views
2
answers
Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 2.6 years ago by martinguerrerog89270 • updated 11 weeks ago by david.peeney20
81
votes
9
answers
22k
views
31 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 6.3 years ago by diltsjeri440 • updated 10 months ago by alslonik80
99
votes
5
answers
108k
views
15 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 8.9 years ago by Biomed4.5k • updated 5.5 years ago by Chris Miller20k
37
votes
2
answers
3.0k
views
10 follow
2
answers
60
votes
1
answer
17k
views
23 follow
1
answer
51
votes
6
answers
23k
views
17 follow
6
answers
What Metrics Are Best To Describe The "Coverage" Of Rna-Seq Data?
sequencing rpkm next-gen rna data written 8.5 years ago by Bio_X2Y3.7k • updated 3.2 years ago by Biostar ♦♦ 20
61
votes
7
answers
15k
views
25 follow
7
answers
45
votes
5
answers
5.8k
views
7 follow
5
answers
58
votes
18
answers
20k
views
35 follow
18
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71
votes
10
answers
15k
views
40 follow
10
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Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 6.9 years ago by Prakki Rama2.2k • updated 9 months ago by Corentin260
81
votes
6
answers
46k
views
48 follow
6
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How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 4.9 years ago by krithika.gu250 • updated 10 months ago by Fred073060
45
votes
4
answers
8.3k
views
10 follow
4
answers
How To Produce Simulated 'Synthetic' Sequences
model simulation next-gen sequencing written 8.9 years ago by Stefano Berri4.1k • updated 8.9 years ago by Jonathan Manning620
51
votes
3
answers
3.4k
views
7 follow
3
answers
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