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Forum: Snakemake vs. Nextflow: strengths and weaknesses

forum snakemake nextflow written 15 months ago by ropolocan • 430

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Tool: NextflowWorkbench: An integrated development environment for workflows

lwt tools workflow nextflow workbench written 3.0 years ago by fac2003 • 170 • updated 3.0 years ago by Istvan Albert ♦♦ 77k

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Teacher to Rob ♦ 2.6k
Teacher to Kevin Blighe ♦ 28k
Scholar to benformatics • 270
Popular Question to venu ♦ 5.5k
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Popular Question to Michael Dondrup ♦ 44k

Recent Replies

C: 1d fetures and 2d features of a protien by Ram ♦ 17k
1. Why is this a `Forum` discussion when it should be a `Question`? 2. What is the context of y...
C: Naive question about blast db by h.mon ♦ 19k
ah, windows... Are you using `cmd.exe` or the linux subsystem for windows?
C: Illegal Division by zero by sicat.paolo20 • 20
Hi, thanks for the help. I'll try to apply this next. Apologies if I am not good at this. I am tr...
C: Illegal Division by zero by sicat.paolo20 • 20
$features[$oligo+1] I tried redoing this and ensuring that @features does not contain any ze...
C: Naive question about blast db by anasofiamoreira94 • 30
When i do ls /path/blastdb/nt it outputs the lists: (example) C:\ncbi-blast-2.8.0+\bin\all_nt\nt...
A: GLM to predict what SNP influences DNA-methylation by Kevin Blighe ♦ 28k
Hi Sven, Seems like a very interesting project. I would do the following: 1. prune your SNP d...
C: Scientific Programmer II / Meteorologist by Ram ♦ 17k
Is this a bioinformatics position? If not, it does not belong on this forum.
C: Scientific Programmer II / Meteorologist by gholland • 0
To Apply Please Use the Link Below https://careers-aceinfo.icims.com/jobs/3528/scientific-progra...
C: Naive question about blast db by h.mon ♦ 19k
What `ls /path/blastdb/nt*` and `ls /path/blastdb/nt.nal` show?
A: Cofactor Genomics is hiring a Computational Scientist (San Francisco, CA) by Dave Messina • 10
Thanks, [@genomax][1], and yes, that's the correct link. We are actively interviewing for this p...
C: Comparing genome assemblies of the same animal by a.rex • 150
Yes, I suppose I can adjust the Snakefile?
C: Naive question about blast db by anasofiamoreira94 • 30
i have my real path their, of course. i put it their to exemplify my error.

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