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Recent Replies
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C: the track part of UCSC table browser by
Emily_Ensembl ♦ 15k
Why can't you download a GTF directly?
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C: the track part of UCSC table browser by
Emily_Ensembl ♦ 15k
I've added the tags UCSC, GTF and Table browser to your query. People on BioStars use the tags to...
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C: Remove some IDs from IDs list by
finswimmer ♦ 2.7k
Hello Janey, what is that special in your unix system? You already have started a [thread][1] ...
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C: problem in matching the names between file names and patients Id in TCGA by
nazaninhoseinkhan • 230
I could get the full description of my files finally. Thank u all for your helps and comments
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C: Remove some IDs from IDs list by
Janey • 10
Hi finswimmer Because my unix system is very specific, so among all the suggestions of my previo...
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C: How to retrieve EC numbers and KOs for proteins of several taxons? by
cleb • 30
I added a new post [here](https://www.biostars.org/p/321307/); would be gr5eat if you could take ...
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C: bowtie2 paired end insertion length by
d-cameron • 1.7k
I just use -X 1000 so it works on practically all input libraries. Aren't you getting fewer conco...
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C: how samtools rmdup remove cut reads made more reads been drop( cut or uncut read by
finswimmer ♦ 2.7k
Hello, the estimation of duplicates is based on mapping information. If you cut your reads to th...
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A: selecting the templates for homology modelling from modeller by
virangihewage • 0
Thank you ram for the comment. tem1 0.12E-03 tem2 0.50E-02 tem3 0.86E-04 tem4 0.25E-02 te...
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C: grep/awk issue: can't extract sequences from a fasta file by
Vijay Lakhujani ♦ 2.4k
Using [seqkit][1] [How to extract sequences subset from FASTA/Q file with name/ID list file?][2...
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C: problem in matching the names between file names and patients Id in TCGA by
nazaninhoseinkhan • 230
Hi Kevin, I run the code successfully. However I faced with another problem again. I have 1026 f...
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C: Mutation position on sequencing read length by
finswimmer ♦ 2.7k
Hello Rahul, so question is about whether your variants are true or false positive. What was you...
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