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5
votes
3
answers
1.2k
views
3
answers
Errors attempting to start OMA job on SLURM-managed cluster
oma slurm written 2.8 years ago by Adamc • 540 • updated 2.7 years ago by adrian.altenhoff • 420
0
votes
2
answers
876
views
2
answers
OMA Orthology Error Message
genome software error oma alignment blast written 3.6 years ago by Apricimo • 0
7
votes
2
answers
1.4k
views
2
answers
Can OMA calculate orthologs for single query sequence?
standalone oma ortholog written 3.0 years ago by a.zielezinski ♦ 8.5k • updated 3.0 years ago by cyril-cros • 840
3
votes
2
answers
774
views
2
answers
OMA error: Writing Part files to general cache area, not a specific dir
oma homology written 2.6 years ago by moranr • 250 • updated 2.6 years ago by adrian.altenhoff • 420
1
vote
2
answers
1.2k
views
2
answers
Error when running OMA on PBS with job array
orthologs parallelization oma pbs written 2.5 years ago by gonzalez.pech.ra • 0
0
votes
2
answers
956
views
2
answers
OMA, GOdata/Wget error
orthologs oma godownload darwin written 2.2 years ago by protistologist • 0 • updated 2.2 years ago by adrian.altenhoff • 420
1
vote
2
answers
797
views
2
answers
[OMA] If my jobs stop (SGE) will the results be conserved (AllvsAll) in the cache folder ?
orthologs oma written 2.0 years ago by pourbiostars • 0
1
vote
2
answers
557
views
2
answers
OMA, Error in PropagateFunctionByGroup, invalid arguments in intersect (Mac OS)
orthologs oma written 22 months ago by linlinzhao.c • 0 • updated 12 months ago by andreag1987 • 0
1
vote
2
answers
554
views
2
answers
OMA WARNING: took too long (>1200 sec) to find clusters
oma written 20 months ago by tauanajc • 0
0
votes
2
answers
718
views
2
answers
OMA error message
oma ortholog written 16 months ago by ni • 0
2
votes
2
answers
625
views
2
answers
Failure to launch OMA in array mode on SLURM cluster
orthologs oma slurm written 13 months ago by jeremias.br • 10
1
vote
2
answers
628
views
2
answers
Fail job after all vs all : Error, 'unable to ReadProgram on SLURM cluster
oma written 13 months ago by gusa_10 • 0
2
votes
2
answers
412
views
2
answers
Will lowering the LengthTol parameter increase false positive links in Orthology Groups?
orthologs oma written 13 months ago by robert.zimmermann • 10 • updated 12 months ago by david_emms • 40
3
votes
2
answers
614
views
2
answers
grid engine problem with OMA
cluster oma grid engine written 12 months ago by andrespara • 0 • updated 12 months ago by adrian.altenhoff • 420
2
votes
2
answers
606
views
2
answers
usage of OMA on a HPC cluster with slurm
oma slurm written 11 months ago by Young • 0
0
votes
2
answers
282
views
2
answers
start OMA run - file.log
oma omabrowser written 8 months ago by dtejadamartinez • 10
4
votes
2
answers
253
views
2
answers
Trying to hack OMA to do specific All-v-All searches
orthologs oma written 4 months ago by jason.kwan • 0 • updated 4 months ago by Christophe Dessimoz • 500
0
votes
1
answer
2.0k
views
1
answer
Orthomcl-results without co-orthologs and in-paralogs
oma bacteria ortholog written 3.8 years ago by natasha.sernova • 3.1k • updated 3.8 years ago by Christophe Dessimoz • 500
5
votes
1
answer
2.0k
views
1
answer
Tools to find the unique proteins (without orthologs) in a bacterial taxon
orthologs protein oma bacteria taxon written 3.5 years ago by natasha.sernova • 3.1k • updated 3.4 years ago by h.mon ♦ 21k
3
votes
1
answer
1.3k
views
1
answer
OMA BROWSER ID MAPPING
orthologs oma id mapping rgap oryza sativa written 3.3 years ago by kozhaki.seq • 50 • updated 3.3 years ago by adrian.altenhoff • 420
0
votes
1
answer
1.2k
views
1
answer
problems with OMA
software error oma next-gen orthology written 3.1 years ago by jabc • 0 • updated 3.1 years ago by Christophe Dessimoz • 500
6
votes
1
answer
1.2k
views
1
answer
Details of OMA Running Process - OMA standalone
orthologs oma written 3.1 years ago by moranr • 250 • updated 3.1 years ago by Christophe Dessimoz • 500
2
votes
1
answer
1.6k
views
1
answer
Gene Gain/loss + Duplication Tree
orthologs oma written 3.0 years ago by moranr • 250 • updated 3.0 years ago by adrian.altenhoff • 420
1
vote
1
answer
961
views
1
answer
oma stack size error
oma ortholog written 3.0 years ago by jasonshiller • 10 • updated 3.0 years ago by adrian.altenhoff • 420
4
votes
1
answer
933
views
1
answer
What exactly is OMA doing here ?
orthologs oma written 3.0 years ago by moranr • 250 • updated 3.0 years ago by adrian.altenhoff • 420
2
votes
1
answer
846
views
1
answer
OMA error in stage 2 of 2 stage process
oma written 3.0 years ago by moranr • 250 • updated 3.0 years ago by adrian.altenhoff • 420
1
vote
1
answer
883
views
1
answer
Error:Matches between Pre-computed exports are for different versions of the genome ?
oma written 2.8 years ago by moranr • 250 • updated 2.8 years ago by Christophe Dessimoz • 500
3
votes
1
answer
859
views
1
answer
Is this warning fatal in OMA
orthologs oma written 2.8 years ago by moranr • 250 • updated 12 weeks ago by RamRS ♦ 19k
2
votes
1
answer
1.1k
views
1
answer
OMA parameter error Message
parameter.drw cds oma multiple species written 2.6 years ago by chevivien • 70 • updated 2.6 years ago by adrian.altenhoff • 420
2
votes
1
answer
1.5k
views
1
answer
What's the best way to find out 1:1 ortholog presented in multiple speceis
oma ortholog written 2.6 years ago by yuanfeifuzzy • 0 • updated 2.6 years ago by Christophe Dessimoz • 500
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