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<prev • 87 results • page 1 of 3 • next >
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Problem running OMA standalone
standalone oma omabrowser written 16 days ago by olbei.marton • 0
5
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2
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1.2k
views
2
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grid engine problem with OMA
cluster oma grid engine written 2.9 years ago by andrespara • 10 • updated 21 days ago by Biostar ♦♦ 20
4
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1
answer
103
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1
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OMA standalone estimating memory use for bacterial genomes
orthologs oma written 28 days ago by Andrew Watson • 40 • updated 28 days ago by adrian.altenhoff • 700
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0
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131
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0
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OMA error: Gene ontology, darwin
oma written 10 weeks ago by di • 0
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1
answer
141
views
1
answer
Alignment scores thresholds with DNA
oma written 11 weeks ago by souzademedeiros • 0 • updated 11 weeks ago by adrian.altenhoff • 700
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186
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oma -c error report
oma written 3 months ago by Sadie4444 • 0 • updated 3 months ago by zx8754 ♦ 9.7k
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0
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151
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0
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oma -c killed
oma written 3 months ago by Sadie4444 • 0 • updated 3 months ago by RamRS ♦ 30k
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1
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154
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1
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can standalone OMA be used on protein fasta (not genome)
orthologs oma written 5 months ago by fyfes • 30 • updated 5 months ago by adrian.altenhoff • 700
0
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1
answer
171
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1
answer
Clusters proteins at each taxonomic rank - OMA
oma clustering written 5 months ago by anusblat • 0 • updated 5 months ago by adrian.altenhoff • 700
1
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1
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179
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1
answer
Error, 'sequence 1 is too long' OMA Standalone
oma written 6 months ago by carlosandrecds • 0 • updated 6 months ago by adrian.altenhoff • 700
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0
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417
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0
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OMA not finding numpy; pip and wget failing
wget oma slurm numpy pip written 9 months ago by feander • 0
6
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1
answer
262
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1
answer
Cannonical human sequence missing in OMA database?
software error R oma written 11 months ago by asente • 10 • updated 10 months ago by Christophe Dessimoz • 700
0
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2
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814
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2
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start OMA run - file.log
oma omabrowser written 2.6 years ago by dtejadamartinez • 20 • updated 12 months ago by Biostar ♦♦ 20
1
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1
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580
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1
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Clarification of OMA tree metrics
orthologs oma species tree written 22 months ago by samche42 • 0 • updated 14 months ago by Biostar ♦♦ 20
1
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1
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403
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1
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Error in some hog codes using pyham
oma written 16 months ago by Biojl • 1.7k • updated 16 months ago by clement.train • 10
1
vote
1
answer
380
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1
answer
Mismatch between gene IDs in Map-SeqNum-ID.txt and HierarchicalGroups.orthoxml
oma orthology pyham written 18 months ago by eschang1 • 10 • updated 18 months ago by adrian.altenhoff • 700
2
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1
answer
428
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1
answer
Downloading genomes from OmaDB with PyOMADB or OMA API
orthologs oma written 18 months ago by hannah.muelbaier • 0 • updated 18 months ago by adrian.altenhoff • 700
2
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1
answer
373
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1
answer
OMA standalone has not listed splice variants used
oma written 18 months ago by nc52 • 10 • updated 18 months ago by adrian.altenhoff • 700
2
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1
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451
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1
answer
OMA gene vs splicing variants in the output
orthologs oma orthologs oma pyham written 18 months ago by mateusz.konczal • 0 • updated 18 months ago by adrian.altenhoff • 700
2
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1
answer
392
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1
answer
OMA browser: finding exact genome release information
orthologs genome oma orthology written 18 months ago by olbei.marton • 0 • updated 18 months ago by adrian.altenhoff • 700
2
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1
answer
403
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1
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OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
orthologs oma orthology written 19 months ago by eschang1 • 10 • updated 18 months ago by adrian.altenhoff • 700
1
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1
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449
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1
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OMA error in reading the all-against-all files
oma written 18 months ago by nc52 • 10 • updated 18 months ago by adrian.altenhoff • 700
3
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1
answer
442
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1
answer
Correct formatting for IDs in OMA standalone .splice files to properly identify splice variants
orthologs oma orthology written 19 months ago by eschang1 • 10
5
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2
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587
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2
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OMA error - download from gene ontology not working 404
orthologs oma written 20 months ago by nc52 • 10 • updated 20 months ago by Christophe Dessimoz • 700
0
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1
answer
436
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1
answer
Getting the highest taxonomy in the HOG database for a given OMA gene id
orthologs oma hog written 20 months ago by yogihooda88 • 10 • updated 20 months ago by Christophe Dessimoz • 700
3
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1
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376
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1
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Error, 'Matches sp1/sp2 have been computed\ for different version
omastandalone oma written 20 months ago by dtejadamartinez • 20 • updated 20 months ago by adrian.altenhoff • 700
2
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0
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518
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0
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OMA core dumped error in a single node/machine
oma orthology written 21 months ago by andrespara • 10 • updated 21 months ago by Biostar ♦♦ 20
1
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1
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568
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1
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Best way running OMA using SLURM
oma slurm written 21 months ago by dimar.gonzalez.soto • 0 • updated 21 months ago by adrian.altenhoff • 700
0
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4
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541
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4
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OMA cannot evaluate boolean
orthologs oma issue bug written 21 months ago by thomasbersez • 50
3
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1
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509
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1
answer
Download cdna sequences from OMA
orthologs oma written 23 months ago by Biojl • 1.7k • updated 23 months ago by adrian.altenhoff • 700
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