1 hour ago by
Matteo Ungaro
▴
100
0
votes
2
replies
36
views
1
vote
0
replies
138
views
0
votes
0
replies
115
views
0
votes
3
replies
314
views
1
vote
4
replies
408
views
what's the genomic location and name of gene responsible for orange and black patches in calico cats
updated 17 hours ago by
Matthias Zepper
4.5k
•
written 19 hours ago by
Ann
★
2.4k
0
votes
0
replies
102
views
0
votes
0
replies
105
views
20 hours ago by
Nitin
•
0
0
votes
0
replies
111
views
0
votes
0
replies
101
views
21 hours ago by
Rodolfo Adrián
•
0
0
votes
1
reply
173
views
0
votes
0
replies
120
views
0
votes
0
replies
104
views
23 hours ago by
DanielEB_fisk
▴
20
0
votes
1
reply
200
views
0
votes
0
replies
124
views
updated 22 hours ago by
Ram
43k
•
written 1 day ago by
Dinmukhamed
•
0
0
votes
0
replies
125
views
0
votes
0
replies
132
views
updated 22 hours ago by
Ram
43k
•
written 1 day ago by
atharvakarkare14
▴
10
3
votes
3
replies
354
views
0
votes
2
replies
438
views
0
votes
0
replies
144
views
updated 1 day ago by
GenoMax
141k
•
written 1 day ago by
N.Y.Wiyana-Hewage
•
0
0
votes
2
replies
304
views
0
votes
2
replies
295
views
1 day ago by
Ashok
•
0
0
votes
2
replies
330
views
1 day ago by
Ashok
•
0
0
votes
0
replies
149
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
samuelkalandarov2002
•
0
0
votes
2
replies
350
views
22 hours ago by
_quantum_girl_
▴
10
0
votes
0
replies
155
views
0
votes
0
replies
150
views
1 day ago by
enferdeflame
•
0
0
votes
0
replies
163
views
0
votes
1
reply
393
views
0
votes
0
replies
147
views
updated 1 day ago by
Ram
43k
•
written 2 days ago by
bioinfo223
▴
10
0
votes
0
replies
160
views
2 days ago by
P.
•
0
0
votes
0
replies
153
views
1
vote
1
reply
339
views
21 hours ago by
renan.igor
•
0
0
votes
0
replies
152
views
0
votes
1
reply
242
views
0
votes
4
replies
544
views
1
vote
1
reply
208
views
updated 2 days ago by
Ram
43k
•
written 2 days ago by
jammydodger123456
▴
40
0
votes
2
replies
336
views
2 days ago by
22211020193
•
0
0
votes
0
replies
157
views
1
vote
2
replies
244
views
updated 2 days ago by
Ram
43k
•
written 2 days ago by
aniigodwinn
•
0
0
votes
0
replies
310
views
2
votes
7
replies
743
views
updated 1 day ago by
joe
▴
510
•
written 3 days ago by
quentinperriere
•
0
0
votes
1
reply
175
views
updated 3 days ago by
DKA
▴
40
•
written 3 days ago by
james.melhorn
•
0
0
votes
1
reply
165
views
0
votes
0
replies
142
views
3 days ago by
chemokine-1
▴
10
0
votes
4
replies
452
views
2 days ago by
feather-W
•
0
0
votes
2
replies
189
views
0
votes
0
replies
158
views
3 days ago by
Ali
•
0
2
votes
4
replies
285
views
3 days ago by
kirill.zaslavsky
•
0
0
votes
2
replies
219
views
Recent Votes
Recent Locations •
All
Germany, 2 minutes ago
United States, 6 minutes ago
Hong Kong, 6 minutes ago
Singapore, 7 minutes ago
Italy, 7 minutes ago
United States, 10 minutes ago
UCLA, 13 minutes ago
Recent Awards •
All
Popular Question to
Rodolfo Adrián
•
0
Scholar to
damian.szk
▴
70
Popular Question to
alphaflylizard
•
0
Popular Question to
Shicheng Guo
★
9.4k
Popular Question to
DanielEB_fisk
▴
20
Recent Replies
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
ATpoint
81k
You can, if you use RStudio via Docker, for example `bioconductor/bioconductor_docker`. I currently manage many different projects with thi…
Comment: bam merging for archaic samples
by
Matteo Ungaro
▴
100
@Pierre Lindenbaum I see. So, I can actually manipulate just one single RG tag at the time with `samtools`? Which flag should I use, or sho…
Comment: bam merging for archaic samples
by
Pierre Lindenbaum
161k
RG tag "L9302" is missing the the BAM header. You should have something like this in the BAM header
```
@RG ID:L9302 SM:L9302
```
may be…
Answer: Filtering sam or bam file with maximum matching region
by
Pierre Lindenbaum
161k
> . Is there any way to find through sam or bam file that which chromosomal position are maximum reads aligning to?
samtools depth i…
Comment: Calculate Radius of Gyration [python 3]
by
ndm1096
•
0
Hello Franco. I am very much new with bioinformatics but I have been tasked with studying the radius of gyration of a timeseries of a prote…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
That makes a lot more sense. Thank you.
Answer: Removing Illumina microarray probes with no expression HumanHT-12v4
by
Gordon Smyth
★
7.0k
Type
```
help("read.idat")
```
and read the example at the bottom of the page, which shows you how to set the `other$Detection` component o…
Comment: Free/open source 23andme-like analysis
by
swbarnes2
14k
Accurately assessing a few QC metrics is trivially easy.
Assessing the significance of variants in a clinically responsible way is really…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
swbarnes2
14k
If _1 and _2 really are the same library, you should rename the fastqs, or make symlinks, such that they have the same sample name, but dif…
Comment: Cellranger count error: Input FASTQ file ended prematurely
by
ATpoint
81k
Just delete the index read files. They just take up space and will never be used.
Comment: Adding CB tag to bam file
by
swbarnes2
14k
Yes. Why wouldn't you use, say, AddOrReplaceReadsGroups?
Comment: Ciriquant not configuring hisat2 indexed files
by
Atul K.
•
0
Thank you. Decreased the threads to 2 (changed the threads: 2 in the config file; but it was somehow using 4). It did run for sometime but …
Answer: GTF file from Stringtie to R Studio for either Ballgown or DESeq2
by
Ram
43k
See this section on how to use tximport to import StringTie output for DESeq2 processing: https://bioconductor.org/packages/devel/bioc/vign…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Can you explain the normalization or give me a link that describes it, please? Comparison across samples will always be caveated as RNA-seq…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
Sorry, I see how harsh I come across. It's not good practice to use multiple versions of R in the same project. I can understand legacy pro…
Traffic: 1671 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6