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284 results • Page
2 of 6
Sort: Votes
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Views
Votes
Replies
1
vote
2
replies
563
views
Help to understand set.seed(547) in R
p-value
R
updated 3 days ago by
Ram
38k • written 16 months ago by
Hien
• 0
1
vote
7
replies
1.7k
views
Platypus variantcaller.c:16971 errpr
platypus
updated 14 hours ago by
Ram
38k • written 4.2 years ago by
nuketbilgen
▴ 40
1
vote
1
reply
194
views
From where i can download the bed file of hg19 which contaning the corrdinates as well as gene name.
bed
updated 3 days ago by
Ram
38k • written 6 days ago by
Anisha
• 0
1
vote
1
reply
1.3k
views
Biology student new to genetic bioinformatics
genetics
updated 3 days ago by
Ram
38k • written 7.3 years ago by
bioinformatics_student
• 0
1
vote
3
replies
5.2k
views
How to convert a .gbff to the .gbk using batch method (to do it computationally for several bacteria)
gbff
genome
gbk
updated 3 days ago by
Ram
38k • written 5.3 years ago by
natasha.sernova
★ 3.9k
1
vote
2
replies
366
views
What's the reason and how to fix - Regression model summary - variable name is combined with a category character in R
interpretation
Model
GLM
Regression
Summary
LM
5 days ago by
ohtang7
▴ 30
1
vote
7
replies
1.2k
views
miRDeep2.pl cannot recognize reference fasta file
mirdeep2
fasta
mirna
mirdeep2.pl
mirna-sequencing
updated 3 days ago by
Ram
38k • written 3.0 years ago by
realnewbie
▴ 30
1
vote
0
replies
2.1k
views
How to split protein tandem domains fasta sequnces to multiple single sequences?
protein
redundancy
updated 3 days ago by
Ram
38k • written 8.1 years ago by
astrozheng
▴ 10
1
vote
2
replies
732
views
Micro array analysis
gene
updated 6 days ago by
Ram
38k • written 4.3 years ago by
mj13711373
• 0
1
vote
3
replies
221
views
FeatureCounts >edgeR > GO
RNA-SEQ
updated 2 hours ago by
Basti
★ 1.4k • written 1 day ago by
Pegasus
▴ 80
1
vote
3
replies
1.5k
views
Merging individual .bed files?
bed
bam
samtools
bamtobed
updated 3 days ago by
Ram
38k • written 4.7 years ago by
genomics Newbie
▴ 60
1
vote
2
replies
224
views
How much reads per cell for fusion detection with Nanopore ?
single-cell
fusion
nanopore
4 days ago by
Evan
▴ 170
1
vote
9
replies
2.6k
views
bam to fasta error using samtools
fasta
bam
updated 3 days ago by
Ram
38k • written 6.0 years ago by
christacaggiano
▴ 60
1
vote
1
reply
204
views
What's the correct way to map to hg38 with alternative contigs?
NGS
bwa
updated 4 days ago by
ATpoint
70k • written 4 days ago by
Belanov
▴ 10
1
vote
0
replies
148
views
I want to calculate if the sample has whole genome duplication event or not?
sequencing
wgs
4 days ago by
Hyper_Odin
▴ 280
1
vote
2
replies
862
views
fcGENE error during conversion from .ped to .gen
imputation
fcgene
updated 3 days ago by
Ram
38k • written 3.7 years ago by
pifferdavide
▴ 100
1
vote
5
replies
4.7k
views
Multiple alignment format (MAF) to VCF
MAF
VCF
updated 3 days ago by
Ram
38k • written 7.0 years ago by
ksw
▴ 40
1
vote
1
reply
2.2k
views
raw count data- normalization
RNA-Seq
gene
updated 6 days ago by
Ram
38k • written 4.8 years ago by
ghmdsr
▴ 70
1
vote
3
replies
3.7k
views
How to sort fastq.gz files efficiently
fastq
sort
updated 3 days ago by
Ram
38k • written 7.0 years ago by
komal.rathi
★ 4.1k
1
vote
8
replies
1.7k
views
What is NCBI Gene ID, where to find it and how to convert to entrez ID?
RNA-Seq
updated 6 days ago by
Ram
38k • written 3.4 years ago by
mnazir
• 0
1
vote
1
reply
63
views
How to create GO Bar Plot using data obtained from DAVID Functional Enrichment Analysis?
Plot
DAVID
R
updated 2 hours ago by
Basti
★ 1.4k • written 3 hours ago by
Stefanus C.B.
• 0
1
vote
3
replies
346
views
DESeq2 code to perform DEG analysis
SEseq2
DEG
updated 3 days ago by
Ram
38k • written 22 days ago by
rupali
• 0
1
vote
2
replies
284
views
Bioinformatics package
python
updated 6 days ago by
WouterDeCoster
47k • written 7 days ago by
zainabi8077
▴ 10
1
vote
0
replies
206
views
Assembling a very large and repetitive insert
NGS
Assembly
c.elegans
updated 3 days ago by
Ram
38k • written 13 months ago by
mrtylerkennedy
▴ 10
1
vote
3
replies
436
views
Hisat2 Script Help
hisat2
mapping
updated 3 days ago by
Ram
38k • written 8 months ago by
smithkthedale
▴ 10
1
vote
2
replies
227
views
Handling single-sample VCF after haplotypecaller
VCF
1 day ago by
Y.H.P
• 0
1
vote
1
reply
330
views
scRNA seq with seurat: how do I add a column to the metadata?
scRNA-seq
scRNA
updated 3 days ago by
Ram
38k • written 3 months ago by
cdeantoneo31
▴ 10
1
vote
2
replies
935
views
How to convert multiple .vcf files into single .ped (PLINK compatible files)?
vcf
ped
PLINK
WGS
updated 3 days ago by
Ram
38k • written 17 months ago by
isml2688
• 0
1
vote
2
replies
617
views
How to discover novel piRNA?
piRNA
next-gen-sequencing
updated 6 days ago by
Ram
38k • written 3.7 years ago by
a.nappi32
▴ 10
1
vote
4
replies
1.2k
views
biostars.org: Search capped to 50 hits?
meta
biostars
updated 3 days ago by
Ram
38k • written 6.0 years ago by
dariober
14k
1
vote
1
reply
527
views
How can I convert plink (.bed, .fam and .bim) fileset to .pgen file format?
pgan
plink
bed
updated 3 days ago by
Ram
38k • written 5 months ago by
Mahan
▴ 70
1
vote
1
reply
174
views
Problem in generating the BAM files using STAR
BAM
STAR
updated 14 hours ago by
Ram
38k • written 6 months ago by
boomathi.91
• 0
0
votes
1
reply
384
views
Open source projects
programming
updated 3 days ago by
Ram
38k • written 13 months ago by
Sam
• 0
0
votes
1
reply
229
views
RNA-seq using rasflow - issues with annotation file
gtf
rasflow
gff
RNA-seq
updated 3 days ago by
Ram
38k • written 5 months ago by
cdeantoneo31
▴ 10
0
votes
3
replies
151
views
A problem about saving Rstudio data matrix
data
Rstudio
matrix
updated 4 days ago by
bkleiboeker
▴ 320 • written 4 days ago by
yoser4
▴ 10
0
votes
1
reply
188
views
How to obtain unmapped reads from the paired end samples using hisat2
fastq
hisat2
updated 14 hours ago by
Ram
38k • written 8 weeks ago by
otieno43
• 0
0
votes
1
reply
2.4k
views
How to identify library name in fastq filename
fastq
read-group
library-name
gatk
updated 3 days ago by
Ram
38k • written 5.1 years ago by
zmk
• 0
0
votes
0
replies
190
views
How to find association between a gene-rsid and AD
association
Loci
LD
AD
4 days ago by
rheab1230
▴ 140
0
votes
4
replies
323
views
WGCNA number of modules issue
networks
gene
WGCNA
correlation
4 days ago by
1215045934
▴ 80
0
votes
4
replies
688
views
How to download the final reads of SRA data from NCBI using fastq-dumb
fastq
fasta
SRA
updated 3 days ago by
Ram
38k • written 21 months ago by
FadyNabil
▴ 10
0
votes
1
reply
1.8k
views
bwa XA field: What is the procedure for the binning of all but one alternative alignments into XA?
sam
bwa
updated 3 days ago by
Ram
38k • written 6.3 years ago by
izaak.coleman1
▴ 30
0
votes
2
replies
2.1k
views
Plotting .tab/.bam file
matplotlib
tab
python
bam
updated 3 days ago by
Ram
38k • written 3.4 years ago by
zack.henning
• 0
0
votes
2
replies
679
views
Biopython - HiddenMarkovModel output
python
biopython
MarkovModel
updated 3 days ago by
Ram
38k • written 3.3 years ago by
andreammo97
• 0
0
votes
0
replies
114
views
How would I assess evolutionary estimates between duplicated vs. non-duplicated genes in PAML?
PAML
1 day ago by
codoncity
• 0
0
votes
1
reply
1.1k
views
Is there a list of E. coli genes whose promoters use sigma factor 70 (sigma70)?
transcription
sigma
genomics
e.coli
RNA-Seq
updated 3 days ago by
Ram
38k • written 5.2 years ago by
jespinoz
▴ 20
0
votes
5
replies
1.7k
views
Need Bioinformatics Help - Analyzing Unknown Dna Sequence
gene
sequence
Nucleotide
updated 3 days ago by
Ram
38k • written 4.4 years ago by
jamie_cooper2341
• 0
0
votes
1
reply
644
views
How produce a table with number of copies per unique sequence? (possible?)
fastq
updated 3 days ago by
Ram
38k • written 3.8 years ago by
angelaparody
▴ 100
0
votes
2
replies
597
views
Mapping reads to 5 UTR, 3 UTR and CDS
UTR
mapping
CDS
updated 3 days ago by
Ram
38k • written 18 months ago by
student12
• 0
0
votes
1
reply
1.2k
views
Converting Eigenstrat format to G-phocs-input format
Eigenstrat
G-phocs
updated 3 days ago by
Ram
38k • written 4.2 years ago by
h.shafiey
• 0
0
votes
2
replies
158
views
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
vcf.gz
UnicodeDecodeError
ancIBD
23 hours ago by
wangjincheng
• 0
284 results • Page
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