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1,000 results • Page
2 of 20
Sort: Votes
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Votes
Replies
7
votes
5
replies
2.2k
views
using machine learning regards to ribo-seq data sets
gene-regulatory-network
ribo-seq
machine-learning
updated 5 months ago by
Ram
38k • written 7.6 years ago by
fi1d18
★ 4.1k
7
votes
4
replies
2.8k
views
Mapping BAM/SAM file back to reference?!?!
SAM
reference
BWA
BAM
updated 6 months ago by
Ram
38k • written 7.5 years ago by
ab.tsubaki
▴ 50
7
votes
15
replies
4.7k
views
6 follow
blastn error - NCBI C++ Exception
assembly
blast
alignment
updated 11 months ago by
lieven.sterck
14k • written 24 months ago by
sunnykevin97
▴ 970
7
votes
4
replies
1.0k
views
Are there mm39/GRCm39 blacklist regions?
blacklist
10 months ago by
Ian
5.9k
7
votes
10
replies
1.2k
views
Ubuntu 20.04 Crash
Ubuntu
updated 5 weeks ago by
Ram
38k • written 14 months ago by
bala
• 0
7
votes
4
replies
1.7k
views
useful and freely available softwares for Bioinformatics
software
updated 3 days ago by
Ram
38k • written 8.0 years ago by
Mo
▴ 920
7
votes
4
replies
1.1k
views
Error: missing values and NaN's not allowed if 'na.rm' is FALSE
Genome
Software
8 months ago by
sunnykevin97
▴ 970
7
votes
13
replies
3.6k
views
DESeq2: can I correct for relatedness when using data from multiplex families?
DESeq2
RNA-Seq
Multiplex-families
updated 11 months ago by
Ram
38k • written 8.1 years ago by
alesssia
▴ 580
7
votes
8
replies
2.9k
views
DEseq2 design matrix with 3 factors
rna-seq
deseq2
Forum
updated 9 months ago by
krushnach80
★ 1.1k • written 2.8 years ago by
kand3e
▴ 50
7
votes
6
replies
3.8k
views
Low percentage of reads in Tophat, Is the any setting to improve?
Tophat
updated 11 months ago by
Ram
38k • written 8.2 years ago by
Leandro de Mattos
▴ 90
7
votes
8
replies
2.4k
views
Discrepency between number of reads tophat
RNA-Seq
tophat
software-error
updated 5 months ago by
Ram
38k • written 7.6 years ago by
mbio.kyle
▴ 380
6
votes
6
replies
3.1k
views
Bowtie2 classification of discordantly mapped pairs
discordant-pairs
bowtie2
alignment
updated 6 months ago by
Ram
38k • written 7.5 years ago by
nthe
▴ 30
6
votes
4
replies
322
views
Equivalent to SeqMan alignment tool
SeqMan
alignments
5 weeks ago by
A_heath
▴ 120
6
votes
6
replies
3.5k
views
Already Working In The Field Of Bioinformatics With A Bachelors, Is A Masters Degree Worth The Time?
masters
career
updated 20 days ago by
Ram
38k • written 9.5 years ago by
ashah90
▴ 30
6
votes
2
replies
2.2k
views
Which is the best smoothing technique for replacing zeros from data?
Smoothing
updated 10 weeks ago by
Ram
38k • written 7.8 years ago by
Deepak Tanwar
★ 4.2k
6
votes
7
replies
5.8k
views
best alignment tool for Ion Torrent data
chloroplast
genome
iontorrent
updated 7 months ago by
Ram
38k • written 7.3 years ago by
Ann
★ 2.3k
6
votes
1
reply
1.9k
views
gene expression in bioinformatics
gene-expression
updated 5 months ago by
Ram
38k • written 7.6 years ago by
kaviumanath2003
• 0
6
votes
2
replies
1.7k
views
Periodicity in SNP calling quality - is this normal?
RNA-Seq
VCF
GATK
SNP
updated 6 months ago by
Ram
38k • written 7.5 years ago by
John
13k
6
votes
3
replies
2.9k
views
Homology ratio comparison between different species
Homology
evolutionary-distance
updated 9 months ago by
Ram
38k • written 8.0 years ago by
newscient
▴ 20
6
votes
9
replies
4.7k
views
Best Possible set of Python interview questions for Bioinformatics, that a recruiter can ask?
python
updated 14 hours ago by
Ram
38k • written 7.9 years ago by
gaurav.singh
▴ 10
6
votes
4
replies
631
views
Can someone could recommend some article (code and files included) related to alcoholic disease on any grounds?
alcoholic
tumor
updated 11 months ago by
Mensur Dlakic
★ 23k • written 11 months ago by
ja4123
• 0
6
votes
7
replies
2.2k
views
Standardizing the language of lab protocols [Current status]
protocols
automation
updated 6 months ago by
Ram
38k • written 7.5 years ago by
Crackjack
▴ 20
6
votes
6
replies
3.0k
views
What does it mean for a snp to be enriched?
next-gen
R
SNP
genome
updated 8 months ago by
Ram
38k • written 7.1 years ago by
ehzed
▴ 40
6
votes
6
replies
1.2k
views
paired read or not paired read
RNA-Seq
updated 3 months ago by
Ram
38k • written 7.9 years ago by
fi1d18
★ 4.1k
6
votes
5
replies
1.7k
views
the gene_id column is different for each sample when counting fpkm in galaxy cufflinks
RNA-Seq
galaxy
cufflinks
fpkm
updated 8 months ago by
Ram
38k • written 7.3 years ago by
fi1d18
★ 4.1k
6
votes
3
replies
1.7k
views
PLINK results interpretation
SNP
software-error
updated 5 months ago by
Ram
38k • written 7.7 years ago by
genetic
▴ 40
6
votes
3
replies
439
views
Seeking a platform like R language for NGS data manipulation
NGS
R
data
analysis
10 months ago by
field654
▴ 30
6
votes
12
replies
1.1k
views
Good tutorials/textbooks/articles to introduce biomarker discovery to a biologist?
r
biomarker
updated 3 days ago by
Ram
38k • written 4.2 years ago by
english.server
▴ 290
6
votes
9
replies
970
views
for paired-end unmapped reads after star mapping
STAR-mapping
Trinity
assembly
unmapped-reads
updated 6 months ago by
GenoMax
126k • written 6 months ago by
tvibhaps
• 0
6
votes
3
replies
3.1k
views
Comment On The Introduction Of A Bioinformatics Paper
publication
bayesian-model
updated 14 days ago by
Ram
38k • written 9.0 years ago by
Faheemmitha
▴ 210
6
votes
15
replies
941
views
The Best Cloud Solution For Genomics
cloud
data-sharing
genomics
workflow
updated 8 months ago by
Ram
38k • written 9 months ago by
davidmaimoun
▴ 50
6
votes
5
replies
1.6k
views
rna seq bowtie couldn't find index files
tophat
Bowtie
RNA-Seq
updated 11 months ago by
Ram
38k • written 6.2 years ago by
prasanthgopinathangs
▴ 60
6
votes
11
replies
652
views
Calculate RPKM
RPKM
6 hours ago by
Chris
▴ 70
6
votes
9
replies
632
views
Error when runing Bowtie2: (ERR): bowtie2-align exited with value 1
error
BAM
Bowtie
updated 7 weeks ago by
GenoMax
126k • written 7 weeks ago by
luzglongoria
▴ 40
6
votes
5
replies
3.3k
views
Mirna Target Prediction
mirna
target
utr
updated 10 months ago by
Ram
38k • written 10.9 years ago by
Janake
▴ 170
6
votes
13
replies
5.9k
views
DESeq2 and edgeR - no agreement between results
RNA-Seq
edgeR
DESeq2
updated 7 months ago by
Ram
38k • written 7.3 years ago by
ilyco
▴ 60
6
votes
12
replies
1.2k
views
VCF files 101 - for people from non Bioinformatics Background
vcf
sequencing
genome
variant-calling
updated 7 days ago by
Ram
38k • written 2.6 years ago by
akshaykum684
▴ 20
6
votes
5
replies
4.9k
views
MA plots DESeq: strange MA plots
RNA-Seq
MAplot
DESeq
updated 3 months ago by
Ram
38k • written 7.7 years ago by
VHahaut
★ 1.1k
6
votes
4
replies
2.4k
views
Trouble renaming output files after running PHYLIP programs from a BASH script
PHYLIP
sequence
software-error
updated 7 months ago by
Ram
38k • written 7.2 years ago by
sviatoslav.kendall
▴ 880
6
votes
13
replies
601
views
Error with STAR
STAR
updated 11 days ago by
Ram
38k • written 14 days ago by
Chris
▴ 70
6
votes
2
replies
4.2k
views
Adding header to VCF and combine VCF
vcf
updated 8 months ago by
Ram
38k • written 7.4 years ago by
basalganglia
▴ 40
6
votes
10
replies
810
views
Understanding bam tracks
RNA
sequencing
bam
updated 6 months ago by
Pierre Lindenbaum
153k • written 6 months ago by
Tonkatsu
▴ 30
6
votes
4
replies
372
views
Tools for strand direction detection RNA-Seq
Rna-seq
strandedness
updated 3 months ago by
iraun
5.8k • written 3 months ago by
pubsurfted
▴ 40
6
votes
6
replies
4.2k
views
Performance of circRNA detection tools
RNA-Seq
circRNA
updated 5 months ago by
Ram
38k • written 7.6 years ago by
Graslevy
▴ 240
6
votes
6
replies
4.5k
views
MSD calculations vs time
MDsimulation
python
computational-biology
updated 3 months ago by
Ram
38k • written 7.7 years ago by
contact.lifesciences.inc
▴ 30
6
votes
14
replies
2.6k
views
mapping RNAseq reads to a genbank isoforme that is not in Reference Annotation
RNA-Seq
sequence
cufflinks
new isoform in rnaseq
updated 8 months ago by
Ram
38k • written 7.1 years ago by
fta.mirzadeh
• 0
6
votes
7
replies
4.1k
views
8 follow
desktop bioinformatics platform specs
hardware
desktop
updated 3 months ago by
Ram
38k • written 7.7 years ago by
rob234king
▴ 610
6
votes
2
replies
448
views
Need to Modify this
language
R
updated 12 weeks ago by
ATpoint
70k • written 12 weeks ago by
imtiaz
• 0
6
votes
3
replies
6.6k
views
How to set a threshold for coefficient of variation in RNA-seq?
dispersion
statistics
single-cell
RNA-Seq
variance
updated 11 months ago by
Ram
38k • written 8.2 years ago by
gaelgarcia
▴ 250
6
votes
3
replies
2.1k
views
vcf-merge gives empty output or run forever
vcf-merge
vcftools
updated 8 months ago by
Ram
38k • written 7.1 years ago by
ste.arnoux
• 0
1,000 results • Page
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nottested, something like: ``` version 1.0 workflow BIOSTAR { call FIRST { } scatter (F in FIRST.each_F)…
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