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Hi, did you end up solving this? I am running into the same issue.
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and what about enhancer? is it possible to do it from a bulk-RNAseq?
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yes! clearly the terminology on my side needs to improved!
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True, but it's not technically impossible to annotate GVCFs, which is why I did not address that point.
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Thank you very much. I get it from UCSC.
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