16 days ago by
jkim
▴
170
2
votes
6
replies
397
views
2
votes
5
replies
676
views
2
votes
4
replies
2.6k
views
updated 15 days ago by
Ram
43k
•
written 8.0 years ago by
Chris Gene
▴
80
2
votes
2
replies
257
views
2
votes
0
replies
1.8k
views
updated 8 days ago by
Ram
43k
•
written 3.4 years ago by
chatterjee.arumoy
▴
50
2
votes
2
replies
258
views
9 days ago by
bioinfo
▴
150
2
votes
3
replies
279
views
updated 29 days ago by
bioruffo
▴
40
•
written 29 days ago by
realtreeecat
•
0
2
votes
6
replies
629
views
2
votes
5
replies
436
views
2
votes
3
replies
1.1k
views
2
votes
7
replies
805
views
updated 6 days ago by
joe
▴
510
•
written 7 days ago by
quentinperriere
•
0
2
votes
2
replies
271
views
updated 13 days ago by
ATpoint
82k
•
written 13 days ago by
Shicheng Guo
★
9.4k
2
votes
9
replies
798
views
2
votes
3
replies
253
views
2
votes
5
replies
668
views
2
votes
18
replies
1.6k
views
2
votes
2
replies
262
views
29 days ago by
kayah
•
0
2
votes
4
replies
239
views
2
votes
10
replies
819
views
2
votes
0
replies
202
views
1
vote
0
replies
149
views
1
vote
2
replies
269
views
updated 7 days ago by
Ram
43k
•
written 7 days ago by
aniigodwinn
•
0
1
vote
3
replies
229
views
1 day ago by
Art1ess
•
0
1
vote
1
reply
190
views
1
vote
3
replies
190
views
1
vote
1
reply
459
views
updated 16 days ago by
chrchang523
10k
•
written 16 days ago by
dsbusiness135
▴
10
1
vote
2
replies
207
views
1
vote
0
replies
537
views
1
vote
2
replies
285
views
8 days ago by
bp22
▴
80
1
vote
1
reply
174
views
1
vote
6
replies
1.6k
views
updated 9 days ago by
Ram
43k
•
written 3.8 years ago by
amirmehrgou
▴
10
1
vote
3
replies
253
views
updated 23 days ago by
dariober
14k
•
written 23 days ago by
leranwangcs
▴
120
1
vote
1
reply
175
views
1
vote
7
replies
888
views
updated 29 days ago by
Ram
43k
•
written 9 months ago by
Manuel Sokolov Ravasqueira
▴
100
1
vote
0
replies
155
views
1
vote
3
replies
349
views
updated 23 days ago by
Pierre Lindenbaum
161k
•
written 24 days ago by
Max
•
0
1
vote
2
replies
921
views
1
vote
1
reply
157
views
1
vote
2
replies
808
views
1
vote
2
replies
1.0k
views
updated 22 days ago by
Ram
43k
•
written 2.4 years ago by
adnan.lahuf
•
0
1
vote
2
replies
821
views
1
vote
3
replies
344
views
updated 8 days ago by
ATpoint
82k
•
written 11 days ago by
naveedhasan2000
•
0
1
vote
2
replies
325
views
updated 21 days ago by
jkbonfield
★
1.2k
•
written 5 weeks ago by
geocarvalho
▴
360
1
vote
0
replies
367
views
1
vote
3
replies
6.1k
views
1
vote
2
replies
625
views
26 days ago by
colindaven
6.4k
1
vote
1
reply
222
views
updated 7 days ago by
Ram
43k
•
written 7 days ago by
jammydodger123456
▴
40
1
vote
4
replies
807
views
1
vote
1
reply
243
views
1
vote
2
replies
312
views
updated 9 days ago by
Istvan Albert
100k
•
written 11 days ago by
Jiang
•
0
Recent Votes
Recent Locations •
All
Canada, just now
France, just now
France, 1 minute ago
Germany, 1 minute ago
Taiwan, 1 minute ago
UCLA, 2 minutes ago
China, 4 minutes ago
Recent Awards •
All
Popular Question to
anasjamshed
▴
120
Popular Question to
camillab.
▴
160
Popular Question to
Simone
▴
10
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
daffodil
▴
10
Popular Question to
Russ
▴
500
Recent Replies
Comment: Fetch table from clinvar database according to a list of rsid
by
ashaneev07
▴
20
so which one should i prefer? i don't need the entire results i need the condition-Germline table only. (for eg:-from, https://www.ncbi.nlm…
Comment: To get p-values for the TPM
by
dsull
★
5.8k
OK, not sure why your intention is to use RSEM p-values for, but at least tell us the commands you ran then otherwise how are we supposed t…
Comment: Fetch table from clinvar database according to a list of rsid
by
Pierre Lindenbaum
161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: different FeatureCounts output for the same data
by
sehriban.buyukkilic
▴
10
Sure, I'll inquire about the version of Rsubread. I'll keep you posted if it works :) Thanks
Comment: different FeatureCounts output for the same data
by
sehriban.buyukkilic
▴
10
Yeah, let me show you my featureCounts result, it looks like this. It's too low.
[1]: /media/images/eb8293fe-e6ae-4b02-92e2-0ba2075b
Comment: Adding CB tag to bam file
by
Pierre Lindenbaum
161k
samtools addreplacerg is for read groups. This is not what OP asked.
Comment: Adding CB tag to bam file
by
Maria
•
0
When I try ``` samtools addreplacerg -r "@CB\tID:$cell" -o $cell.bam $LINE``` the CB tag gets add to the header, but the tag in every line …
Answer: Figures are disappeared from html report of SnpEff
by
Pierre Lindenbaum
161k
the remote website providing the javascript or/and the images is down or you're now behind a proxy. Check the firefox console: https://fire…
Comment: Fetch table from clinvar database according to a list of rsid
by
Pierre Lindenbaum
161k
ah ! and your code doesn't work because clinvar ID is not a rs-ID.
Answer: Fetch table from clinvar database according to a list of rsid
by
Pierre Lindenbaum
161k
$ cat input.rs
rs11203366
rs11203367
rs874881
rs776453694
rs80324279
rs324420
rs112766203
wget -…
Comment: Highest variable features in single cell data
by
ATpoint
82k
> and these cells are not even in a single cluster.
What does this mean? If you run clustering on all cells then every cell is assigned t…
Comment: Is it possible to get a list of representative genomes from a past RefSeq releas
by
Bertalan_Takacs
▴
90
Yes, I can tell that, but as far as I see it doesn't contain any other information about the genomes, such as if they were representative i…
Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
by
b.contreras.moreira
▴
170
You can try <https://github.com/inab/trimal>
Comment: To get p-values for the TPM
by
VITALA
•
0
yes i want what rsem does and i did try with prior-enhanced option/pRSEM, but i think pRSEM is for chipseq data
Comment: alignment result
by
ahmad.sajad4541
•
0
Thank you so much. Should i proceed for annotation step?
Traffic: 2713 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6