15
votes
16
replies
818
views
8
votes
5
replies
365
views
4
votes
6
replies
395
views
3
votes
3
replies
284
views
5 days ago by
Chris
▴
200
3
votes
15
replies
566
views
2
votes
4
replies
3.3k
views
updated 50 minutes ago by
alejandrogzi
▴
30
•
written 6.0 years ago by
Javad
▴
150
2
votes
2
replies
293
views
2
votes
7
replies
707
views
updated 1 day ago by
Ram
40k
•
written 11 days ago by
Can Abdullah
•
0
2
votes
6
replies
269
views
2
votes
10
replies
2.8k
views
6 follow
2
votes
2
replies
1.9k
views
updated 1 day ago by
Ram
40k
•
written 4.2 years ago by
kristina.mahan
▴
160
1
vote
3
replies
280
views
5 days ago by
synat.keam
▴
80
1
vote
1
reply
226
views
updated 5 days ago by
Zhenyu Zhang
▴
980
•
written 5 days ago by
Luke
▴
10
1
vote
4
replies
253
views
updated 6 days ago by
Ram
40k
•
written 6 days ago by
_quantum_girl_
▴
10
1
vote
5
replies
402
views
1
vote
3
replies
962
views
updated 1 day ago by
Ram
40k
•
written 3.1 years ago by
kristina.mahan
▴
160
1
vote
2
replies
302
views
1 day ago by
safeassli
•
0
1
vote
0
replies
127
views
1
vote
1
reply
214
views
1
vote
6
replies
722
views
updated 1 day ago by
Ram
40k
•
written 3.2 years ago by
kristina.mahan
▴
160
1
vote
7
replies
3.6k
views
updated 2 days ago by
Kevin Blighe
86k
•
written 4.9 years ago by
divya.nandakumar
▴
30
1
vote
2
replies
3.2k
views
1
vote
4
replies
409
views
1
vote
3
replies
286
views
1
vote
3
replies
333
views
1
vote
5
replies
299
views
1
vote
2
replies
186
views
0
votes
2
replies
1.1k
views
updated 1 day ago by
Ram
40k
•
written 3.0 years ago by
kristina.mahan
▴
160
0
votes
6
replies
854
views
updated 1 day ago by
Ram
40k
•
written 3.0 years ago by
kristina.mahan
▴
160
0
votes
0
replies
209
views
0
votes
0
replies
248
views
0
votes
4
replies
196
views
0
votes
1
reply
180
views
0
votes
1
reply
124
views
updated 1 day ago by
Ram
40k
•
written 1 day ago by
avinash.dhar
•
0
0
votes
1
reply
139
views
0
votes
1
reply
108
views
updated 17 hours ago by
Pierre Lindenbaum
157k
•
written 19 hours ago by
Athena
•
0
0
votes
2
replies
167
views
updated 14 hours ago by
Matthias Zepper
4.1k
•
written 1 day ago by
4fzcgueyp5
•
0
0
votes
1
reply
201
views
updated 12 hours ago by
biofalconch
★
1.0k
•
written 3 days ago by
gorizwango
▴
30
0
votes
2
replies
269
views
updated 12 hours ago by
biofalconch
★
1.0k
•
written 4 days ago by
Aime
•
0
0
votes
0
replies
58
views
updated 9 hours ago by
Ram
40k
•
written 12 hours ago by
Bioinfonext
▴
440
0
votes
0
replies
62
views
updated 9 hours ago by
Ram
40k
•
written 15 hours ago by
yamamoto.yasuyuki.n6
•
0
0
votes
0
replies
68
views
0
votes
0
replies
57
views
updated 9 hours ago by
Ram
40k
•
written 11 hours ago by
ayaosama2111
▴
10
0
votes
3
replies
287
views
0
votes
0
replies
52
views
5 hours ago by
avelarbio46
▴
30
0
votes
0
replies
33
views
5 hours ago by
v.berriosfarias
▴
130
0
votes
1
reply
69
views
0
votes
1
reply
221
views
0
votes
9
replies
234
views
0
votes
4
replies
115
views
Recent Votes
Recent Locations •
All
San Francisco, just now
United States, just now
United States, 3 minutes ago
United States, 9 minutes ago
China, 10 minutes ago
Texas, United States, 14 minutes ago
Turkey, 20 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
130
Popular Question to
avelarbio46
▴
30
Popular Question to
Bioinfonext
▴
440
Popular Question to
hemantcnaik
•
0
Recent Replies
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
Kevin Blighe
86k
It is difficult for me to comment, as I am not too informed on your IT infrastructure. What I can say is that it would be better to run the…
Answer: Converting from BED to SAF/GFF
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Comment: Convert bed12 to GFF
by
alejandrogzi
▴
30
Now there is [bed2gff](https://github.com/alejandrogzi/bed2gff), if you want to work only with a gff file!
Comment: Converting different annotation file formats (GTF/GFF/BED) to each other
by
alejandrogzi
▴
30
now there is also [bed2gff](https://github.com/alejandrogzi/bed2gff) if you want to convert .bed files to .gff3 files!
Answer: How Do I Convert From Bed Format To Gff Format?
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Answer: tensorQTL interaction issue
by
Solal
•
0
Writing a solution for anyone interested.
The issue stems from a dosage error, some variant contains only heterozygous individuals and no h…
Answer: The Biostar Handbook. A bioinformatics e-book for beginners.
by
Qboy
•
0
Great book! I love using it to help my mentees to learn bioinformatics better. It would be also fantastic to compile all other necessary Pr…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Thanks.
I'll try.
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
avelarbio46
▴
30
Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
Comment: Kimura% of calcDivergenceFromAlign output
by
睿紘
•
0
For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
Correct. Data that went into the assembly.
Traffic: 1340 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6