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1,000 results • Page
2 of 20
Sort: replies
Rank
Views
Votes
Replies
6
votes
21
replies
2.7k
views
How to evaluate the similarity of genes between two sample
RNA-Seq
differential
updated 5.5 years ago by
Biostar
20 • written 5.7 years ago by
afli
▴ 190
7
votes
21
replies
3.1k
views
Merged.gtf vs. Rnor_6.0.gtf for Raw Counts
RNA-Seq
cuffmerge
raw counts
7.4 years ago by
jmsyl.hong
• 0
8
votes
20
replies
2.6k
views
Getting read depth for normal and tumour
R
WGS
vcf
5.0 years ago by
zizigolu
★ 4.3k
5
votes
20
replies
4.1k
views
DiscoSnp Segmentation fault
snp
discosnp
updated 18 months ago by
Ram
43k • written 8.6 years ago by
Hans
▴ 140
0
votes
20
replies
1.5k
views
Rockhoppper - Suspiciously low percentage of perfectly aligned reads
Rockhopper
RNA-seq
5 months ago by
langziv
▴ 50
6
votes
20
replies
6.3k
views
filling of missing genotype information in merged variant call vcf file
SNP
5.8 years ago by
princy149
▴ 80
5
votes
20
replies
8.2k
views
How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
ChIP-Seq
homer
7.6 years ago by
varsha619
▴ 90
22
votes
20
replies
2.5k
views
what is the prefered strategy to treat with blast-less transcriptomes from RNA-seq
blast
RNA-Seq
genome
gene
updated 11 months ago by
Ram
43k • written 7.7 years ago by
Farbod
★ 3.4k
8
votes
20
replies
2.9k
views
Why does cufflinks split this transcript?
RNA-Seq
cufflinks
assembly
6.2 years ago by
corend
▴ 70
2
votes
20
replies
2.2k
views
The number of SVs called by `vg call` is much smaller than the number of SVs in the VCF used to construct the graph
vg
6 months ago by
Maxine
▴ 40
9
votes
20
replies
4.1k
views
Solve SAM issues flagged by Picard's ValidateSamFile
Picard
SAM
updated 12 months ago by
Ram
43k • written 5.6 years ago by
marongiu.luigi
▴ 710
8
votes
20
replies
2.4k
views
Converting runpsipred Script to Work on Windows OS
psipred
windows
updated 22 months ago by
Ram
43k • written 5.7 years ago by
Bara'a
▴ 270
4
votes
20
replies
1.8k
views
How can I count aminoacid residues from a HUGE compressed fasta file?
sequence
4.2 years ago by
schlogl
▴ 160
6
votes
19
replies
2.8k
views
Clustering for Single-cell RNA-seq Data
clustering
R
single-cell
4.7 years ago by
aloke205
▴ 40
22
votes
19
replies
3.1k
views
targets of a list of miRNAs
miRNAs
RNA-Seq
DEanalysis
target-prediction
7.5 years ago by
zizigolu
★ 4.3k
9
votes
19
replies
2.3k
views
There are any way to use a script for feed emboss with fasta sequence?
sequence
4.2 years ago by
schlogl
▴ 160
3
votes
19
replies
1.4k
views
Systematic errors at the end and beginning of reads in NGS panels
NGS
error
panels
sequencing
updated 8 months ago by
Asaf
10k • written 8 months ago by
captainlabman
▴ 20
0
votes
19
replies
1.5k
views
best blast strategy: read vs cluster?
alignment
blast
search
strategy
4.3 years ago by
marongiu.luigi
▴ 710
7
votes
19
replies
2.9k
views
mapping script process sleeping on server.
alignment
updated 22 months ago by
Ram
43k • written 9.1 years ago by
lvogel
▴ 30
0
votes
19
replies
3.8k
views
Difficulty installing GATKtoolkit
GATK
Variant calling
SNPs
Indels
6.2 years ago by
jaqx008
▴ 110
10
votes
19
replies
3.3k
views
What is a difference between uniprot and 'nr. Non-redundant GenBank...'?
Genebank
blast
UniProt
updated 2.9 years ago by
GenoMax
140k • written 2.9 years ago by
matt
▴ 20
15
votes
19
replies
1.9k
views
trimmomaric command for a fasta file?
trimmomatic
updated 5.9 years ago by
Ram
43k • written 5.9 years ago by
Nadin.asal
• 0
1
vote
19
replies
775
views
Matching transcriptomic data to clinical data
R
updated 7 weeks ago by
Ram
43k • written 8 weeks ago by
Khadija
▴ 10
0
votes
19
replies
9.4k
views
Skip orientation as there are not enough pairs by bwa mem
whole genome
bwa
paired end sequencing
4.8 years ago by
seta
★ 1.9k
1
vote
19
replies
2.0k
views
High no feature counts in ht-seq counts
RNA-Seq
sequencing
5.3 years ago by
eozcan
▴ 10
5
votes
19
replies
1.7k
views
how I can come up with a permanent error
R
software error
6.9 years ago by
zizigolu
★ 4.3k
6
votes
19
replies
1.6k
views
Fastq header modification
sequence
next-gen
updated 6.0 years ago by
Ram
43k • written 6.0 years ago by
Guillaume
• 0
3
votes
19
replies
5.9k
views
gatk-launch file missing
next-gen
sequencing
software error
updated 4.9 years ago by
finswimmer
16k • written 4.9 years ago by
sruthi
▴ 40
4
votes
19
replies
3.1k
views
Use machine learning as classifier
R
rRNA
16S
18S
ITS
updated 6.6 years ago by
Biostar
20 • written 6.7 years ago by
cool.abbecker
▴ 30
18
votes
19
replies
2.2k
views
6 follow
Extremely important marker gene has many reads based on IGV viewer but no quantified reads
rna-seq
sequencing
igv
alignment
next-gen
updated 16 months ago by
Ram
43k • written 5.2 years ago by
rbkh09
• 0
17
votes
19
replies
2.7k
views
Sorting sequences according header
software error
sequence
Assembly
next-gen
7.6 years ago by
Gian77
▴ 60
5
votes
19
replies
3.9k
views
8 follow
Hisat2 aligner problem
RNA-Seq
ChIP-Seq
alignment
Assembly
software error
updated 3 months ago by
ATpoint
81k • written 4.9 years ago by
ta_awwad
▴ 340
1
vote
19
replies
6.9k
views
Conda install package - different internals
R
software error
updated 4.6 years ago by
Biostar
20 • written 4.6 years ago by
lihe.liu
▴ 30
13
votes
19
replies
5.3k
views
bbmerge not joining paired-end reads
bbmerge
alignment
6.3 years ago by
bioplanet
▴ 60
7
votes
19
replies
7.0k
views
[R] Microarray analysis interpreting logFC after makeContrasts
microarray
R
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
mheiser1
▴ 10
0
votes
19
replies
1.3k
views
map fasts files
RNA-Seq
FASTQ
R
6.1 years ago by
Learner
▴ 280
0
votes
19
replies
2.7k
views
error related to vcfstats
numpy
snp
vcf
vcfstats
2.6 years ago by
rheab1230
▴ 140
0
votes
19
replies
1.9k
views
scatterplot in R
microarray
expression
gene
updated 18 months ago by
Ram
43k • written 18 months ago by
bioinformatics
▴ 40
2
votes
18
replies
6.1k
views
No differentially expressed genes using DESeq2
RNA-Seq
deseq2
7.4 years ago by
Sumit Paliwal
▴ 40
2
votes
18
replies
2.3k
views
I need help in this
gene
weblems
alignment
updated 20 months ago by
Ram
43k • written 8.3 years ago by
efosa15
• 0
5
votes
18
replies
6.6k
views
EnhancedVolcano plot error: Log2foldchange is not numeric!
R
EnhancedVolcano
4.3 years ago by
michelle.piquet
▴ 60
1
vote
18
replies
1.7k
views
Find tissues that are functionally related
tissue
functionally-related
gene-expression
updated 4.6 years ago by
Biostar
20 • written 4.6 years ago by
Natasha
▴ 40
4
votes
18
replies
4.0k
views
Significance of reads mapping to Viruses - FusionCatcher
RNA-Seq
virus
reads
fusion
updated 19 months ago by
Ram
43k • written 8.3 years ago by
Joel TM
▴ 60
14
votes
18
replies
2.0k
views
Clustering in single cell
seurat
single-cell
updated 5 months ago by
e.r.zakiev
▴ 170 • written 6 months ago by
Chris
▴ 260
3
votes
18
replies
1.8k
views
6 follow
What sequencing/alignment artifact is this?
variants
mutect
sequencing
alignment
mitochondria
17 months ago by
lacb
▴ 120
4
votes
18
replies
2.9k
views
Inline barcodes in the reverse reads
barcodes
7.4 years ago by
Picasa
▴ 640
3
votes
18
replies
3.1k
views
Help creating Deseq2 count matrix from separate files
or
Sample
matrix
updated 2.7 years ago by
Ram
43k • written 2.7 years ago by
Nai
▴ 50
0
votes
18
replies
1.8k
views
freebayes error variant calling
snp
3.6 years ago by
evelyn
▴ 220
7
votes
18
replies
4.5k
views
Bowtie indexing of a fasta file that consists of a large amount of sequences
bowtie
alignment
genome
7.4 years ago by
valerie
▴ 100
0
votes
18
replies
1.7k
views
bcl2fastq conversion with specifying exact match of indices
genome
RNA-Seq
sequencing
updated 7 months ago by
GenoMax
140k • written 7 months ago by
Apex92
▴ 280
1,000 results • Page
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