13 days ago by
Samuel
▴
20
0
votes
0
replies
152
views
0
votes
1
reply
214
views
updated 10 days ago by
dthorbur
★
1.9k
•
written 13 days ago by
Herman Einstein
•
0
0
votes
0
replies
138
views
0
votes
0
replies
152
views
0
votes
0
replies
135
views
0
votes
1
reply
170
views
updated 7 days ago by
jkbonfield
★
1.2k
•
written 13 days ago by
pompam_5904
•
0
3
votes
2
replies
209
views
0
votes
0
replies
122
views
0
votes
0
replies
110
views
13 days ago by
DNAngel
▴
250
0
votes
5
replies
307
views
0
votes
1
reply
144
views
0
votes
0
replies
105
views
0
votes
5
replies
309
views
13 days ago by
virginia.baraja
•
0
0
votes
0
replies
100
views
0
votes
3
replies
202
views
updated 13 days ago by
Ram
43k
•
written 14 days ago by
atharvakarkare14
▴
10
0
votes
7
replies
378
views
0
votes
0
replies
328
views
0
votes
0
replies
86
views
14 days ago by
hagl
▴
10
0
votes
3
replies
260
views
0
votes
0
replies
77
views
1
vote
1
reply
173
views
0
votes
0
replies
95
views
0
votes
1
reply
141
views
1
vote
5
replies
321
views
updated 7 days ago by
jkbonfield
★
1.2k
•
written 14 days ago by
sansan_96
▴
80
0
votes
0
replies
98
views
14 days ago by
Shicheng Guo
★
9.4k
0
votes
0
replies
104
views
0
votes
0
replies
93
views
14 days ago by
gimenagomez
•
0
0
votes
6
replies
434
views
8 days ago by
marongiu.luigi
▴
710
0
votes
2
replies
208
views
updated 14 days ago by
Andres
▴
20
•
written 14 days ago by
latita.atun
•
0
2
votes
2
replies
240
views
0
votes
0
replies
96
views
14 days ago by
zea
•
0
0
votes
0
replies
101
views
14 days ago by
edoardofilippi1998
•
0
0
votes
0
replies
127
views
0
votes
0
replies
145
views
0
votes
2
replies
198
views
0
votes
0
replies
88
views
0
votes
1
reply
152
views
0
votes
0
replies
97
views
0
votes
1
reply
186
views
0
votes
0
replies
124
views
updated 15 days ago by
Ram
43k
•
written 15 days ago by
sardana.thakur.prachi
•
0
0
votes
0
replies
97
views
0
votes
0
replies
102
views
updated 15 days ago by
Ram
43k
•
written 15 days ago by
andrebolerbarros
•
0
3
votes
5
replies
390
views
updated 15 days ago by
GenoMax
141k
•
written 15 days ago by
e.r.zakiev
▴
190
0
votes
0
replies
109
views
updated 15 days ago by
Ram
43k
•
written 15 days ago by
Shaimaa Gamal
▴
10
0
votes
0
replies
93
views
4
votes
9
replies
540
views
updated 14 days ago by
Ram
43k
•
written 15 days ago by
dalibenam64
•
0
0
votes
0
replies
242
views
1
vote
1
reply
165
views
updated 16 days ago by
ATpoint
81k
•
written 16 days ago by
sarahmanderni
▴
100
0
votes
4
replies
307
views
2
votes
1
reply
160
views
updated 16 days ago by
GenoMax
141k
•
written 16 days ago by
emilydolivo97
▴
10
Recent Votes
Recent Locations •
All
Stony Brook University, NY, 1 minute ago
Spain, 2 minutes ago
United Kingdom, 3 minutes ago
Italy, 4 minutes ago
Netherlands, 4 minutes ago
United Kingdom, 5 minutes ago
Berlin, 6 minutes ago
Recent Awards •
All
Popular Question to
carlopecoraro2
★
2.5k
Student to
manaswiniparija3
▴
40
Popular Question to
tomas4482
▴
390
Popular Question to
vinayjrao
▴
250
Recent Replies
Comment: Sheep reference genome remapping coordinates
by
valentinatsar
•
0
Thank you for your response
As I can understand this tool takes sequence input files right? I have genome-wide genotypes instead of sequen…
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
by
me
▴
750
Ok I made this into an answer. Could you please accept it as such.
Answer: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
by
me
▴
750
You can't. The data does not exist. UniProt only annotates where a lysine is know to be acetylated. There is no way that UniProt can know w…
Comment: How to compare the quality of assemblies
by
GenoMax
141k
Are there any short read datasets available in SRA? Can you try and see how many left over reads remain after you align to both of your ass…
Comment: Korean human genome reference file
by
GenoMax
141k
From NCBI: https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_001712695.1/
Use the `Download` button or `curl/datasets`.
Comment: SLURM submission problem: Indexing the Reference Genome is not done in STAR
by
GenoMax
141k
> But it keeps giving error
Please tell us what the error is.
Answer: 10x VDJ (TCR/BCR) BAM to fastq
by
GenoMax
141k
Looking at the information about the BAM file in the link included at the end of this sentence, it seems that the BAM file does not contain…
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
by
Jacky
•
0
I got it, thank you for your response.
Answer: DEseq2
by
ATpoint
81k
The DESeq2 input is a numeric count matrix (or data.frame) with rows being genes/observations and columns being samples/cells/specimen. Ple…
Comment: How to add motifs in cellranger-arc reference?
by
Ehsan
•
0
Hi. Do you have any updates on what you ended up doing? I am encountering same issue, cannot really find a good TF motif database for zebra…
Comment: biomaRt error for different R version
by
manaswwm
▴
490
Wonderful, and thanks for tagging Mike!
For those who come back for this problem, the following seemed to work for me:
Downgrading `dbply…
Answer: Assume "yes" as the answer to any prompts with bioconda
by
Juke34
8.5k
From my experience using `biocontainers` base container no need to set `yes` installation is done without any command prompt, otherwise as …
Comment: SLURM submission problem: Indexing the Reference Genome is not done in STAR
by
Dave Carlson
★
1.7k
You're allocating 4 compute nodes (`#SBATCH -N 4`), but STAR can't actually make use of more than 1 compute node. You can increase the num…
Answer: Assume "yes" as the answer to any prompts with bioconda
by
Dave Carlson
★
1.7k
```conda install -y bioconda::packageX conda-forge::packageY``` should do what you're looking for.
Comment: Supergnova stuck in tutorial
by
Murat
•
0
Hi GenoMax,
Thank you for your advice. I sent an email to them and have already opened an issue on Github. Let see if there is any other so…
Traffic: 2680 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6