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4
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OMA standalone estimating memory use for bacterial genomes
orthologs oma written 29 days ago by Andrew Watson40 • updated 29 days ago by adrian.altenhoff700
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2
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Blast thresholds for orthologs search in bacteria
orthologs bacteria blast written 5.7 years ago by ask10 • updated 6 weeks ago by Biostar ♦♦ 20
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213
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154
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can standalone OMA be used on protein fasta (not genome)
orthologs oma written 5 months ago by fyfes30 • updated 5 months ago by adrian.altenhoff700
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113
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Pangenome analysis of the close bacterial genus
orthologs pangenome proteinortho protein identity written 8 months ago by djamalova.d10 • updated 7 months ago by Biostar ♦♦ 20
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213
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BiomaRt Many to Many Relationship filtering
orthologs biomart ensemble orthology written 8 months ago by iislam0 • updated 8 months ago by Ben_Ensembl1.6k
1
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2
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317
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4
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328
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Retreiving 1:1 orthologs from Ensembl Compara using R Biomart
orthologs ensembl biomart compara R written 11 months ago by asente10 • updated 11 months ago by Emily_Ensembl21k
0
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224
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1
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Identifying very closely related proteins
orthologs alignment homologs blast written 11 months ago by Baby Bioinformatician90 • updated 11 months ago by Mensur Dlakic7.0k
4
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7 follow
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Clarification of OMA tree metrics
orthologs oma species tree written 22 months ago by samche420 • updated 14 months ago by Biostar ♦♦ 20
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0
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Problem with Proteinortho.pl
software error orthologs homologs blast written 3.3 years ago by JV410 • updated 17 months ago by paulmjklemm0
2
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428
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1
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Downloading genomes from OmaDB with PyOMADB or OMA API
orthologs oma written 18 months ago by hannah.muelbaier0 • updated 18 months ago by adrian.altenhoff700
2
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451
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OMA gene vs splicing variants in the output
orthologs oma orthologs oma pyham written 18 months ago by mateusz.konczal0 • updated 18 months ago by adrian.altenhoff700
2
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394
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OMA browser: finding exact genome release information
orthologs genome oma orthology written 18 months ago by olbei.marton0 • updated 18 months ago by adrian.altenhoff700
2
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1
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403
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1
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OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
orthologs oma orthology written 19 months ago by eschang110 • updated 18 months ago by adrian.altenhoff700
3
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1
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442
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1
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0
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0
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383
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OrthoMLC for plants proteomes?
gene orthologs paralogs written 21 months ago by thomasbersez50 • updated 19 months ago by Biostar ♦♦ 20
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2
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587
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OMA error - download from gene ontology not working 404
orthologs oma written 20 months ago by nc5210 • updated 20 months ago by Christophe Dessimoz700
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436
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1
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0
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4
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0
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1.4k
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3
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509
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Download cdna sequences from OMA
orthologs oma written 23 months ago by Biojl1.7k • updated 23 months ago by adrian.altenhoff700
3
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1
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858
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1
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Deprecated identifiers in Ensembl?
orthologs ensembl annotation written 2.0 years ago by Solowars50 • updated 2.0 years ago by Emily_Ensembl21k
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2
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894
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2
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 2.1 years ago by wangdp123250 • updated 2.0 years ago by Christophe Dessimoz700
3
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1.2k
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Is this warning fatal in OMA
orthologs oma written 4.7 years ago by moranr270 • updated 2.1 years ago by RamRS30k
1
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512
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Opinion on best way to taxonomically classify a genome
genome orthologs taxonomy phylogenomics written 2.2 years ago by mss30 • updated 2.2 years ago by Carambakaracho2.2k
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726
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OMA standalone error
genome software error oma orthologs written 2.2 years ago by pbravakos0 • updated 2.2 years ago by adrian.altenhoff700
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