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Showing: orthologs • reset
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<prev • 54 results • page 1 of 2 • next >
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Clarification of OMA tree metrics
orthologs oma species tree written 2 days ago by samche42 • 0 • updated 2 days ago by adrian.altenhoff • 440
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1
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103
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1
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Download cdna sequences from OMA
orthologs oma written 22 days ago by Biojl • 1.6k • updated 22 days ago by adrian.altenhoff • 440
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Does MetaCyc or BioCyc have an equivalent of KEGG orthologs that could be blasted against locally?
metacyc orthologs biocyc humann2 metagenomics written 26 days ago by O.rka • 70
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147
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Deprecated identifiers in Ensembl?
orthologs ensembl annotation written 7 weeks ago by Solowars • 40 • updated 7 weeks ago by Emily_Ensembl ♦ 16k
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 12 weeks ago by wangdp123 • 140 • updated 8 weeks ago by Christophe Dessimoz • 500
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Is this warning fatal in OMA
orthologs oma written 2.8 years ago by moranr • 250 • updated 12 weeks ago by RamRS ♦ 19k
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219
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Opinion on best way to taxonomically classify a genome
genome orthologs taxonomy phylogenomics written 3 months ago by msobol • 10 • updated 3 months ago by Carambakaracho • 620
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195
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OMA standalone error
genome software error oma orthologs written 4 months ago by pbravakos • 0 • updated 4 months ago by adrian.altenhoff • 440
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192
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OMA - How to retrieve orthologs of only one representative of each taxonomy rank?
oma orthologs orthologs oma written 4 months ago by anusblat • 0 • updated 4 months ago by Christophe Dessimoz • 500
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Trying to hack OMA to do specific All-v-All searches
orthologs oma written 4 months ago by jason.kwan • 0 • updated 4 months ago by Christophe Dessimoz • 500
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280
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Best way to identify proteins within a family?
domain orthologs oma homology hmmer written 6 months ago by Solowars • 40
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1
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998
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Find out if a protein has an ortholog in EggNog DB
orthologs eggnog human written 2.8 years ago by peter pfand • 70 • updated 8 months ago by urema • 0
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242
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Efficient Sequence Length Comparison
orthologs python transcriptomics orthofinder written 9 months ago by alexander.trouern-trend • 0
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InParanoid: score and cut off for indentify orthologs
orthologs inparanoid blast score written 9 months ago by Izal • 10
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310
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Gene List and Orthologs
orthologs oma e. coli written 10 months ago by shahroze786 • 0 • updated 10 months ago by genomax ♦ 59k
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How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
orthologs ftp go-terms mapping eggnog written 10 months ago by 17th Level Botanist • 10
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406
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comparison between two orthologs
orthologs coding sequence written 10 months ago by nitishd.dave • 20 • updated 10 months ago by Nari • 870
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473
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OMA Warning Unknown character U
orthologs oma written 11 months ago by pnatsidis • 0 • updated 11 months ago by natasha.sernova • 3.1k
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OMA, Error in PropagateFunctionByGroup, invalid arguments in intersect (Mac OS)
orthologs oma written 22 months ago by linlinzhao.c • 0 • updated 12 months ago by andreag1987 • 0
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Will lowering the LengthTol parameter increase false positive links in Orthology Groups?
orthologs oma written 13 months ago by robert.zimmermann • 10 • updated 13 months ago by david_emms • 40
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679
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BUSCO scripts to output data
orthologs annotation busco single copy written 14 months ago by merwright • 0 • updated 13 months ago by Biostar ♦♦ 20
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375
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reducing memory consumption of circoletto
orthologs assembly circos synteny circoletto written 13 months ago by Ric • 190
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628
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Failure to launch OMA in array mode on SLURM cluster
orthologs oma slurm written 14 months ago by jeremias.br • 10
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Retrieving homologues of human proteins using Ensembl REST API?
orthologs ensembl written 18 months ago by db534 • 0 • updated 16 months ago by Biostar ♦♦ 20
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620
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Problem with Proteinortho.pl
software error orthologs homologs blast written 17 months ago by JV • 380
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754
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Bulky collection of the orthologs and paralogs data from Ensembl
orthologs ensembl paralogs written 19 months ago by wangdp123 • 140
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694
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How to find orthologs in both complete and fragmented genomes using OMA Standalone ?
orthologs oma esprit written 20 months ago by amandinette • 10 • updated 20 months ago by Christophe Dessimoz • 500
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727
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OMA current state and its updates
orthologs oma bacteria update written 20 months ago by natasha.sernova • 3.1k • updated 20 months ago by Christophe Dessimoz • 500
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BLAST to find orthologs
orthologs python blast mirna written 21 months ago by alon.shtrikman • 0
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orthologue mapping using circos
orthologs circos written 23 months ago by ashish • 200 • updated 23 months ago by Macspider • 2.6k
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