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Showing: orthologs • reset
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Find out if a protein has an ortholog in EggNog DB
orthologs eggnog human written 2.2 years ago by peter pfand • 70 • updated 25 days ago by urema • 0
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85
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Efficient Sequence Length Comparison
orthologs python transcriptomics orthofinder written 5 weeks ago by alexander.trouern-trend • 0
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99
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InParanoid: score and cut off for indentify orthologs
orthologs inparanoid blast score written 7 weeks ago by Izal • 0
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1
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155
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1
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Gene List and Orthologs
orthologs oma e. coli written 10 weeks ago by shahroze786 • 0 • updated 10 weeks ago by genomax ♦ 46k
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1
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152
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How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
orthologs ftp go-terms mapping eggnog written 10 weeks ago by 17th Level Botanist • 0
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207
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comparison between two orthologs
orthologs coding sequence written 11 weeks ago by nitishd.dave • 20 • updated 10 weeks ago by Nari • 840
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1
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335
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OMA Warning Unknown character U
orthologs oma written 4 months ago by pnatsidis • 0 • updated 4 months ago by natasha.sernova • 2.9k
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2
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422
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2
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OMA, Error in PropagateFunctionByGroup, invalid arguments in intersect (Mac OS)
orthologs oma written 14 months ago by linlinzhao.c • 0 • updated 4 months ago by andreag1987 • 0
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2
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242
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Will lowering the LengthTol parameter increase false positive links in Orthology Groups?
orthologs oma written 5 months ago by robert.zimmermann • 10 • updated 5 months ago by david_emms • 40
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BUSCO scripts to output data
orthologs annotation busco single copy written 6 months ago by merwright • 0 • updated 5 months ago by Biostar ♦♦ 20
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232
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reducing memory consumption of circoletto
orthologs assembly circos synteny circoletto written 5 months ago by Ric • 180
2
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2
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417
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2
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Failure to launch OMA in array mode on SLURM cluster
orthologs oma slurm written 6 months ago by jeremias.br • 10
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421
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Retrieving homologues of human proteins using Ensembl REST API?
orthologs ensembl written 10 months ago by db534 • 0 • updated 8 months ago by Biostar ♦♦ 20
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346
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Problem with Proteinortho.pl
software error orthologs homologs blast written 9 months ago by JV • 330
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1
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406
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1
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Bulky collection of the orthologs and paralogs data from Ensembl
orthologs ensembl paralogs written 11 months ago by wangdp123 • 90
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465
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How to find orthologs in both complete and fragmented genomes using OMA Standalone ?
orthologs oma esprit written 12 months ago by amandinette • 10 • updated 12 months ago by Christophe Dessimoz • 420
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1
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524
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OMA current state and its updates
orthologs oma bacteria update written 13 months ago by natasha.sernova • 2.9k • updated 12 months ago by Christophe Dessimoz • 420
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1
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539
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BLAST to find orthologs
orthologs python blast mirna written 13 months ago by alon.shtrikman • 0
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1
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485
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orthologue mapping using circos
orthologs circos written 15 months ago by ashish • 200 • updated 15 months ago by Macspider • 2.3k
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1
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543
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1
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[OMA] When input sequence data are DNA, OMA conversion in AA ?
orthologs oma orthologous aa dna written 15 months ago by pourbiostars • 0 • updated 15 months ago by Christophe Dessimoz • 420
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354
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perl orthoxml parser
orthologs written 16 months ago by qqq2395 • 0
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2
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[OMA] If my jobs stop (SGE) will the results be conserved (AllvsAll) in the cache folder ?
orthologs oma written 16 months ago by pourbiostars • 0
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Reciprocal best hit by blast
orthologs blast written 17 months ago by qwzhang0601 • 50
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OrthoMcl - Orthologs.txt is empty. All output is present in inParalogs.txt
orthologs orthomcl orthogroup orthomcl written 2.6 years ago by bioinfoSeeker • 20 • updated 18 months ago by Biostar ♦♦ 20
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1.0k
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Find orthologs using EggNOG and local HMMER search for multiple transcripts
orthologs eggnog rna-seq gene hmmer written 18 months ago by Farbod • 3.0k • updated 18 months ago by jhc • 2.6k
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2
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743
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OMA, GOdata/Wget error
orthologs oma godownload darwin written 18 months ago by protistologist • 0 • updated 18 months ago by adrian.altenhoff • 380
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2
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775
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Muliple sequence alignment for sequences in more than 4000 files
orthologs sequence clustalw written 21 months ago by utkarsh.sood • 30 • updated 21 months ago by Rob • 90
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2
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593
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Comparing two gene lists for orthologs
orthologs biopython written 21 months ago by Nitro_Shade • 20 • updated 21 months ago by colindaven • 600
1
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1
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665
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Error when running oma-standalone v1.0.6: Error, (in RangeOfChunk_iterator) sequence 2 is too long
orthologs oma written 22 months ago by javier.herrero • 10 • updated 22 months ago by adrian.altenhoff • 380
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Error when running OMA on PBS with job array
orthologs parallelization oma pbs written 23 months ago by gonzalez.pech.ra • 0
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