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Showing: orthologs • reset
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<prev • 56 results • page 1 of 2 • next >
0
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4
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91
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4
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OMA cannot evaluate boolean
orthologs oma issue bug written 27 days ago by thomasbersez • 10
0
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0
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83
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0
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OrthoMLC for plants proteomes?
gene orthologs paralogs written 27 days ago by thomasbersez • 10
0
votes
1
answer
186
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1
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Does MetaCyc or BioCyc have an equivalent of KEGG orthologs that could be blasted against locally?
metacyc orthologs biocyc humann2 metagenomics written 3 months ago by O.rka • 70 • updated 8 weeks ago by biouser • 20
1
vote
1
answer
126
views
1
answer
Clarification of OMA tree metrics
orthologs oma species tree written 10 weeks ago by samche42 • 0 • updated 9 weeks ago by adrian.altenhoff • 450
3
votes
1
answer
157
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1
answer
Download cdna sequences from OMA
orthologs oma written 3 months ago by Biojl • 1.6k • updated 12 weeks ago by adrian.altenhoff • 450
2
votes
1
answer
201
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1
answer
Deprecated identifiers in Ensembl?
orthologs ensembl annotation written 4 months ago by Solowars • 40 • updated 4 months ago by Emily_Ensembl ♦ 17k
1
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2
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226
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2
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 5 months ago by wangdp123 • 140 • updated 4 months ago by Christophe Dessimoz • 510
3
votes
1
answer
910
views
1
answer
Is this warning fatal in OMA
orthologs oma written 3.0 years ago by moranr • 250 • updated 5 months ago by RamRS ♦ 20k
1
vote
1
answer
258
views
1
answer
Opinion on best way to taxonomically classify a genome
genome orthologs taxonomy phylogenomics written 5 months ago by msobol • 10 • updated 5 months ago by Carambakaracho • 750
1
vote
1
answer
242
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1
answer
OMA standalone error
genome software error oma orthologs written 6 months ago by pbravakos • 0 • updated 6 months ago by adrian.altenhoff • 450
1
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1
answer
232
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1
answer
OMA - How to retrieve orthologs of only one representative of each taxonomy rank?
oma orthologs orthologs oma written 6 months ago by anusblat • 0 • updated 6 months ago by Christophe Dessimoz • 510
4
votes
2
answers
320
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2
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Trying to hack OMA to do specific All-v-All searches
orthologs oma written 6 months ago by jason.kwan • 0 • updated 6 months ago by Christophe Dessimoz • 510
0
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0
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332
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0
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Best way to identify proteins within a family?
domain orthologs oma homology hmmer written 8 months ago by Solowars • 40
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1
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1.1k
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1
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Find out if a protein has an ortholog in EggNog DB
orthologs eggnog human written 3.0 years ago by peter pfand • 80 • updated 10 months ago by urema • 0
0
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0
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281
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0
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Efficient Sequence Length Comparison
orthologs python transcriptomics orthofinder written 11 months ago by alexander.trouern-trend • 0
0
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0
answers
363
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0
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InParanoid: score and cut off for indentify orthologs
orthologs inparanoid blast score written 11 months ago by Izal • 10
0
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1
answer
363
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1
answer
Gene List and Orthologs
orthologs oma e. coli written 12 months ago by shahroze786 • 0 • updated 12 months ago by genomax ♦ 62k
0
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1
answer
497
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1
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How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
orthologs ftp go-terms mapping eggnog written 12 months ago by 17th Level Botanist • 10
0
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1
answer
463
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1
answer
comparison between two orthologs
orthologs coding sequence written 12 months ago by nitishd.dave • 20 • updated 12 months ago by Nari • 870
0
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1
answer
527
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1
answer
OMA Warning Unknown character U
orthologs oma written 14 months ago by pnatsidis • 0 • updated 14 months ago by natasha.sernova • 3.3k
1
vote
2
answers
611
views
2
answers
OMA, Error in PropagateFunctionByGroup, invalid arguments in intersect (Mac OS)
orthologs oma written 2.0 years ago by linlinzhao.c • 0 • updated 14 months ago by andreag1987 • 0
2
votes
2
answers
475
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2
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Will lowering the LengthTol parameter increase false positive links in Orthology Groups?
orthologs oma written 15 months ago by robert.zimmermann • 10 • updated 15 months ago by david_emms • 40
0
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0
answers
771
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0
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BUSCO scripts to output data
orthologs annotation busco single copy written 16 months ago by merwright • 0 • updated 15 months ago by Biostar ♦♦ 20
0
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0
answers
407
views
0
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reducing memory consumption of circoletto
orthologs assembly circos synteny circoletto written 16 months ago by Ric • 190
2
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2
answers
689
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2
answers
Failure to launch OMA in array mode on SLURM cluster
orthologs oma slurm written 16 months ago by jeremias.br • 10
0
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0
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632
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0
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Retrieving homologues of human proteins using Ensembl REST API?
orthologs ensembl written 20 months ago by db534 • 0 • updated 18 months ago by Biostar ♦♦ 20
0
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0
answers
676
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0
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Problem with Proteinortho.pl
software error orthologs homologs blast written 19 months ago by JV • 380
1
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1
answer
828
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1
answer
Bulky collection of the orthologs and paralogs data from Ensembl
orthologs ensembl paralogs written 21 months ago by wangdp123 • 140
4
votes
1
answer
751
views
1
answer
How to find orthologs in both complete and fragmented genomes using OMA Standalone ?
orthologs oma esprit written 22 months ago by amandinette • 20 • updated 22 months ago by Christophe Dessimoz • 510
5
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1
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791
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1
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OMA current state and its updates
orthologs oma bacteria update written 23 months ago by natasha.sernova • 3.3k • updated 22 months ago by Christophe Dessimoz • 510
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