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can standalone OMA be used on protein fasta (not genome)
orthologs oma written 5 weeks ago by fyfes20 • updated 5 weeks ago by adrian.altenhoff650
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Pangenome analysis of the close bacterial genus
orthologs pangenome proteinortho protein identity written 4 months ago by djamalova.d10 • updated 3 months ago by Biostar ♦♦ 20
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BiomaRt Many to Many Relationship filtering
orthologs biomart ensemble orthology written 4 months ago by iislam0 • updated 4 months ago by Ben_Ensembl1.5k
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Retreiving 1:1 orthologs from Ensembl Compara using R Biomart
orthologs ensembl biomart compara R written 7 months ago by asente10 • updated 7 months ago by Emily_Ensembl21k
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Identifying very closely related proteins
orthologs alignment homologs blast written 8 months ago by Baby Bioinformatician90 • updated 8 months ago by Mensur Dlakic5.8k
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Clarification of OMA tree metrics
orthologs oma species tree written 19 months ago by samche420 • updated 11 months ago by Biostar ♦♦ 20
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Problem with Proteinortho.pl
software error orthologs homologs blast written 3.0 years ago by JV400 • updated 13 months ago by paulmjklemm0
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Downloading genomes from OmaDB with PyOMADB or OMA API
orthologs oma written 14 months ago by hannah.muelbaier0 • updated 14 months ago by adrian.altenhoff650
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OMA gene vs splicing variants in the output
orthologs oma orthologs oma pyham written 14 months ago by mateusz.konczal0 • updated 14 months ago by adrian.altenhoff650
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OMA browser: finding exact genome release information
orthologs genome oma orthology written 14 months ago by olbei.marton0 • updated 14 months ago by adrian.altenhoff650
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OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
orthologs oma orthology written 15 months ago by eschang110 • updated 15 months ago by adrian.altenhoff650
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OrthoMLC for plants proteomes?
gene orthologs paralogs written 17 months ago by thomasbersez50 • updated 16 months ago by Biostar ♦♦ 20
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OMA error - download from gene ontology not working 404
orthologs oma written 16 months ago by nc5210 • updated 16 months ago by Christophe Dessimoz660
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Download cdna sequences from OMA
orthologs oma written 19 months ago by Biojl1.7k • updated 19 months ago by adrian.altenhoff650
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Deprecated identifiers in Ensembl?
orthologs ensembl annotation written 20 months ago by Solowars50 • updated 20 months ago by Emily_Ensembl21k
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 21 months ago by wangdp123240 • updated 20 months ago by Christophe Dessimoz660
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Is this warning fatal in OMA
orthologs oma written 4.4 years ago by moranr270 • updated 21 months ago by RamRS27k
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Opinion on best way to taxonomically classify a genome
genome orthologs taxonomy phylogenomics written 22 months ago by mss30 • updated 22 months ago by Carambakaracho2.2k
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OMA standalone error
genome software error oma orthologs written 23 months ago by pbravakos0 • updated 23 months ago by adrian.altenhoff650
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Trying to hack OMA to do specific All-v-All searches
orthologs oma written 23 months ago by jason.kwan0 • updated 23 months ago by Christophe Dessimoz660
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