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Error running OMA standalone at HOG computation step
orthologs oma hog error written 6 weeks ago by gaurav.diwan20 • updated 6 weeks ago by adrian.altenhoff770
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OMA standalone estimating memory use for bacterial genomes
orthologs oma written 3 months ago by Andrew Watson40 • updated 3 months ago by adrian.altenhoff770
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Blast thresholds for orthologs search in bacteria
orthologs bacteria blast written 6.0 years ago by ask10 • updated 4 months ago by Biostar ♦♦ 20
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can standalone OMA be used on protein fasta (not genome)
orthologs oma written 7 months ago by fyfes30 • updated 7 months ago by adrian.altenhoff770
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Pangenome analysis of the close bacterial genus
orthologs pangenome proteinortho protein identity written 10 months ago by djamalova.d10 • updated 9 months ago by Biostar ♦♦ 20
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BiomaRt Many to Many Relationship filtering
orthologs biomart ensemble orthology written 11 months ago by iislam0 • updated 11 months ago by Ben_Ensembl1.6k
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Retreiving 1:1 orthologs from Ensembl Compara using R Biomart
orthologs ensembl biomart compara R written 14 months ago by asente10 • updated 14 months ago by Emily_Ensembl21k
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Identifying very closely related proteins
orthologs alignment homologs blast written 14 months ago by Baby Bioinformatician90 • updated 14 months ago by Mensur Dlakic8.2k
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Clarification of OMA tree metrics
orthologs oma species tree written 2.1 years ago by samche420 • updated 17 months ago by Biostar ♦♦ 20
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Problem with Proteinortho.pl
software error orthologs homologs blast written 3.5 years ago by JV410 • updated 20 months ago by paulmjklemm0
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Downloading genomes from OmaDB with PyOMADB or OMA API
orthologs oma written 21 months ago by hannah.muelbaier0 • updated 21 months ago by adrian.altenhoff770
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OMA gene vs splicing variants in the output
orthologs oma orthologs oma pyham written 21 months ago by mateusz.konczal0 • updated 21 months ago by adrian.altenhoff770
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OMA browser: finding exact genome release information
orthologs genome oma orthology written 21 months ago by olbei.marton0 • updated 21 months ago by adrian.altenhoff770
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OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
orthologs oma orthology written 21 months ago by eschang110 • updated 21 months ago by adrian.altenhoff770
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OrthoMLC for plants proteomes?
gene orthologs paralogs written 2.0 years ago by thomasbersez50 • updated 22 months ago by Biostar ♦♦ 20
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OMA error - download from gene ontology not working 404
orthologs oma written 23 months ago by nc5210 • updated 23 months ago by Christophe Dessimoz700
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Download cdna sequences from OMA
orthologs oma written 2.2 years ago by Biojl1.7k • updated 2.2 years ago by adrian.altenhoff770
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Deprecated identifiers in Ensembl?
orthologs ensembl annotation written 2.3 years ago by Solowars60 • updated 2.3 years ago by Emily_Ensembl21k
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Use OrthoDB to retrieve the orthologs between human and bacteria
orthologs orthodb written 2.3 years ago by wangdp123250 • updated 2.3 years ago by Christophe Dessimoz700
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Is this warning fatal in OMA
orthologs oma written 4.9 years ago by moranr270 • updated 2.4 years ago by _r_am32k
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