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Parsing Protein Trees to determine orthologs and paralogs
orthologs phylogeny paralogs written 6.3 years ago by lchau9120 • updated 6.3 years ago by jhc2.9k
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Find orthologs using EggNOG and local HMMER search for multiple transcripts
orthologs eggnog rna-seq gene hmmer written 3.9 years ago by Farbod3.3k • updated 3.9 years ago by jhc2.9k
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Blast thresholds for orthologs search in bacteria
orthologs bacteria blast written 5.6 years ago by ask10 • updated 7 days ago by Biostar ♦♦ 20
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Gene Gain/loss + Duplication Tree
orthologs oma written 4.8 years ago by moranr270 • updated 4.8 years ago by adrian.altenhoff660
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Selecting primary transcript for each locus from a GFF file
orthologs gff predictions annotations written 5.0 years ago by arnstrm1.8k • updated 5.0 years ago by h.mon31k
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[orthomcl] Proteins with more than one predicted ortholog
orthologs orthomcl evalue written 5.1 years ago by gustavoborin0140 • updated 5.1 years ago by Jean-Karim Heriche23k
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OMA-browser, the manual script failure
orthologs oma written 5.5 years ago by natasha.sernova3.7k • updated 5.5 years ago by RamRS30k
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Muliple sequence alignment for sequences in more than 4000 files
orthologs sequence clustalw written 4.2 years ago by utkarsh.sood30 • updated 4.2 years ago by Rob120
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OMA BROWSER ID MAPPING
orthologs oma id mapping rgap oryza sativa written 5.1 years ago by kozhaki.seq50 • updated 5.1 years ago by adrian.altenhoff660
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Reciprocal best hit by blast
orthologs blast written 3.9 years ago by qwzhang060170
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Details of OMA Running Process - OMA standalone
orthologs oma written 4.9 years ago by moranr270 • updated 4.9 years ago by Christophe Dessimoz700
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OMA, GOdata/Wget error
orthologs oma godownload darwin written 4.0 years ago by protistologist0 • updated 3.9 years ago by adrian.altenhoff660
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Find out if a protein has an ortholog in EggNog DB
orthologs eggnog human written 4.6 years ago by peter pfand100 • updated 2.5 years ago by urema0
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BUSCO scripts to output data
orthologs annotation busco single copy written 3.0 years ago by merwright0 • updated 2.9 years ago by Biostar ♦♦ 20
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Problem with Proteinortho.pl
software error orthologs homologs blast written 3.2 years ago by JV400 • updated 16 months ago by paulmjklemm0
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Is this warning fatal in OMA
orthologs oma written 4.6 years ago by moranr270 • updated 2.0 years ago by RamRS30k
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Comparing two gene lists for orthologs
orthologs biopython written 4.2 years ago by Nitro_Shade20 • updated 4.2 years ago by colindaven2.3k
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What exactly is OMA doing here ?
orthologs oma written 4.8 years ago by moranr270 • updated 4.8 years ago by adrian.altenhoff660
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OMA current state and its updates
orthologs oma bacteria update written 3.5 years ago by natasha.sernova3.7k • updated 3.5 years ago by Christophe Dessimoz700
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