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Obtaining P Values from Cox Regression in R
p-value survival-analysis cox-regression rna-seq written 4 weeks ago by menon_ankita • 20 • updated 4 weeks ago by Kevin Blighe ♦ 56k
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506
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Deflated P-values (GWAS)
p-value gwas snp written 3 months ago by solanum • 10
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p-value in Limma vs Graphpad
p-value adj p limma graphpad written 5 months ago by LuisNagano • 40 • updated 5 months ago by dsull • 990
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How to calculate the p-value of frequency of my study and control of some variants?
p-value allele frequency snp written 5 months ago by mullin.yu • 0
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Calculate p-values and corresponding FDR for all genes in the dataset
p-value R package t-test anova written 6 months ago by mohammedtoufiq91 • 110
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How should I be getting the significance of genetic drift in a SNP?
p-value R statistics genetic-drift data-analysis written 7 months ago by matthew.dambrosio.1 • 0
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Tool: pytfmpval: Efficient, accurate p-value computation for position weight matrices
pwm tool p-value python chip-seq motifs written 19 months ago by jared.andrews07 ♦ 5.2k • updated 7 months ago by caokai001 • 0
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Where to find p-values for GWAS articles
p-value gwas written 4.4 years ago by entheologist33 • 80 • updated 8 months ago by Biostar ♦♦ 20
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Empirical p-value after sampling matching distribution in R
p-value R binning empirical sampling written 13 months ago by User 7754 • 230
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How can I convert -log10 (p-value) to p-value?
p-value written 14 months ago by somayeh bakhshalizadeh • 50 • updated 14 months ago by dariober ♦ 11k
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P-hacking or not in pan-cancer analysis
p-value genome pan-cancer written 16 months ago by Wenhu_Cao • 50
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how to add p-value in R boxplot
boxplot R p-value written 17 months ago by hsu • 10 • updated 17 months ago by Devon Ryan ♦ 94k
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plotting according p-value
p-value plot written 18 months ago by Sam • 140
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P-value problem in Plink
p-value plink logistic written 4.1 years ago by C-man • 10 • updated 18 months ago by RamRS ♦ 26k
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How convert q-value to p-value?
p-value R q-value written 4.1 years ago by star • 230 • updated 18 months ago by RamRS ♦ 26k
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683
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p-value with chi-square test
p-value R significant test rna-seq statistics written 19 months ago by Biologist • 190 • updated 19 months ago by Kevin Blighe ♦ 56k
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9 follow
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Problem for getting P-Value in Module-Trait Relationship in WGCNA
p-value wgcna network analysis written 19 months ago by modarzi • 110
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5 follow
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P-value calculation for Gene Ontology Terms
p-value gene ontology written 20 months ago by nkhan.mscs15seecs • 50 • updated 20 months ago by EagleEye ♦ 6.6k
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Analysis of gene expression data
p-value written 21 months ago by shivangi.agarwal800 • 70
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5 follow
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EdgeR (TMM): Samples with outlier but still show extremely low p-value and FDR
p-value trimmed mean of m-values edger written 2.2 years ago by Joe • 40 • updated 23 months ago by digrigor • 0
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Additional p-value adjustment for multiple comparisons in DESeq2
p-value multiple comparisons deseq2 rna-seq written 24 months ago by goodeats12 • 0 • updated 24 months ago by Devon Ryan ♦ 94k
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Plink: permutation test to linear regression test with covariance
permutation p-value plink linear written 24 months ago by Shicheng Guo • 8.1k • updated 24 months ago by Biostar ♦♦ 20
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False discovery rate in pathway enrichment analysis
p-value false discovery rate written 2.0 years ago by mahmeh • 10
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Confidence Interval in R
p-value R confidence interval rna-seq t test written 2.1 years ago by vinayjrao • 170 • updated 2.1 years ago by Jean-Karim Heriche ♦ 21k
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Minfi probe filtering
p-value R tools minfi written 2.3 years ago by niutster • 90
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Best way to compare expression values between two groups
comparation p-value R written 2.6 years ago by Lila M • 810 • updated 2.6 years ago by theobroma22 • 1.1k
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GOHyperGParams GOstats R package - categorySubsetIds parameter
p-value R hypergeometric test gostats written 2.7 years ago by salamandra • 280
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Enrichment heatmap - GOstats package of R
p-value R gostats written 2.7 years ago by salamandra • 280
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converting very small p-values into chi-squared statistics with python
p-value python chi-squared upper tail gwas written 2.7 years ago by yorgos.athanasiadis • 40
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significance of correlation in biological data
p-value correlation microarray written 2.7 years ago by BrunoGiotti • 110 • updated 2.7 years ago by mforde84 • 1.2k
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