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<prev • 273 results • page 1 of 10 • next >
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Short sequence alignment using Minimap2
minimap2 assembly kmer pacbio grna written 10 days ago by Sbrillo • 0
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75
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Pacbio SRA data format error
bax2bam sra pacbio isoseq3 written 12 days ago by shounak.chakraborty1990 • 0
2
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1
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124
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Merging PacBio and Nanopore reads
assembly next-gen long reads nanopore pacbio written 23 days ago by Sbrillo • 0 • updated 14 days ago by harishk0201 • 110
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81
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What would be an error model for PacBio HiFi reads?
assembly pacbio hifi written 18 days ago by sebastian.schmidt.helsinki • 10
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105
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bamToFastq on Sequel subreads.bam
bam pacbio subreads written 4 weeks ago by christian.dreischer • 0
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101
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Running purge_dups on a hybrid assembly (optical mapping + reads)
purge_dups assembly bionano pacbio written 4 weeks ago by pablo • 160
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104
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1
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Strategy for sequencing genomes of nascent polyploid species
genome assembly polyploidy pacbio sequencing written 5 weeks ago by panosprov • 0 • updated 5 weeks ago by lieven.sterck ♦ 10k
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What do you use to generates summary statistics of sequence and quality data for PacBio?
genome assembly next-gen pacbio sequence written 6.6 years ago by Medhat ♦ 8.9k • updated 9 weeks ago by Biostar ♦♦ 20
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156
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Extract aligned reads from a bam file for only selected coordinates
alignment samtools pacbio bam written 12 weeks ago by star715 • 20
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222
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k-mer distribution to estimate the heterozygosity of my assembly
purge_dups assembly kmer pacbio written 12 weeks ago by pablo • 160
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120
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Arrow GFF Does Not List All Polishing Changes
arrow gff polishing pacbio written 3 months ago by Charles Warden ♦ 8.0k
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175
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PacBio's variantCaller's vcf inconsistent with it's consensus sequence
vcf consensus variantcaller variant pacbio written 4 months ago by mark.rose • 40 • updated 3 months ago by Biostar ♦♦ 20
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351
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Analyzing PacBio sequel data and SRA
genome sra next-gen pacbio sequencing written 3 months ago by Smandape • 60
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144
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How to get the species abundance in metagenomic data sequenced by PacBio/Nanopore?
metagenomic metagenome pacbio nanopore written 3 months ago by u9313025 • 0
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Running IsoSeq pipeline
isoseq pacbio written 2.4 years ago by sbdk • 70 • updated 4 months ago by Biostar ♦♦ 20
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188
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News: Interested in Genome Assembly using long-reads?
assembly news pacbio nanopore written 4 months ago by carlopecoraro2 • 2.0k
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149
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Epigenome characterization with PacBio. Any experience ?
epigenome methylation pacbio written 5 months ago by Antonio R. Franco • 4.6k
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282
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How to use fastq subreads PacBio reference free for analysis
reference free pacbio subreads rna-seq written 5 months ago by sam891 • 10
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212
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IPA (Improved Phased Assembly) output questions
genome assembly pacbio written 5 months ago by slin023 • 0 • updated 5 months ago by h.mon ♦ 32k
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190
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Any new recommended protocol for gene prediction, if you have isoseq data??
isoseq gene prediction pacbio rna-seq written 5 months ago by karthic • 100
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227
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News: Register now for online PacBio Iso-Seq workshop
news iso-seq pacbio written 5 months ago by najoshi • 30
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860
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Using HiCanu assembler on PacBio Hifi reads
hicanu ccs pacbio written 6 months ago by pablo • 160
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277
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Different number of sequences on the same file between two tools
sequencing bam genometools pacbio counts written 8 months ago by pablo • 160 • updated 6 months ago by Biostar ♦♦ 20
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226
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Tool for design of crRNA for Cas9 no amp enrichment (long read)
crrna cas9 pacbio nanopore written 8 months ago by Michael • 170 • updated 6 months ago by Biostar ♦♦ 20
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217
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Improving PacBio Assembly with Illumina reads
assembly pacbio illumina written 6 months ago by pablo • 160
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275
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Samtools merge Illumina and PB bam file empty
illumina samtools merge pacbio bam file written 6 months ago by talbots • 0 • updated 6 months ago by h.mon ♦ 32k
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1
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298
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1
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Time to align full-length transcripts against a reference
assembly canu rna-seq hifiasm pacbio written 7 months ago by pablo • 160 • updated 7 months ago by colindaven • 2.6k
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260
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Different barcodes on demultiplexed data
sequel barcodes pacbio demultiplexing written 7 months ago by pablo • 160
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1
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218
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1
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Difference SMRTlink / SMRTtools
smrttools pacbio smrtlink written 7 months ago by pablo • 160 • updated 7 months ago by GenoMax ♦ 96k
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News: ONLINE COURSE. Eukaryotic genome assembly USING Pacbio and Hi-C
assembly news long-reads pacbio hi-c written 8 months ago by carlopecoraro2 • 2.0k
<prev • 273 results • page 1 of 10 • next >
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