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<prev • 262 results • page 1 of 9 • next >
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How to get the species abundance in metagenomic data sequenced by PacBio/Nanopore?
metagenomic metagenome pacbio nanopore written 2 days ago by u9313025 • 0
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PacBio's variantCaller's vcf inconsistent with it's consensus sequence
vcf consensus variantcaller variant pacbio written 26 days ago by mark.rose • 40
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Running IsoSeq pipeline
isoseq pacbio written 2.1 years ago by sbdk • 60 • updated 26 days ago by Biostar ♦♦ 20
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News: Interested in Genome Assembly using long-reads?
assembly news pacbio nanopore written 6 weeks ago by carlopecoraro2 • 1.8k
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Epigenome characterization with PacBio. Any experience ?
epigenome methylation pacbio written 7 weeks ago by Antonio R. Franco • 4.5k
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How to use fastq subreads PacBio reference free for analysis
reference free pacbio subreads rna-seq written 8 weeks ago by sam891 • 10
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IPA (Improved Phased Assembly) output questions
genome assembly pacbio written 8 weeks ago by slin023 • 0 • updated 8 weeks ago by h.mon ♦ 31k
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Any new recommended protocol for gene prediction, if you have isoseq data??
isoseq gene prediction pacbio rna-seq written 8 weeks ago by karthic • 100
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News: Register now for online PacBio Iso-Seq workshop
news iso-seq pacbio written 9 weeks ago by najoshi • 30
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Using HiCanu assembler on PacBio Hifi reads
hicanu ccs pacbio written 3 months ago by pablo • 150
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Different number of sequences on the same file between two tools
sequencing bam genometools pacbio counts written 4 months ago by pablo • 150 • updated 3 months ago by Biostar ♦♦ 20
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Tool for design of crRNA for Cas9 no amp enrichment (long read)
crrna cas9 pacbio nanopore written 5 months ago by Michael • 160 • updated 3 months ago by Biostar ♦♦ 20
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146
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Improving PacBio Assembly with Illumina reads
assembly pacbio illumina written 3 months ago by pablo • 150
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Samtools merge Illumina and PB bam file empty
illumina samtools merge pacbio bam file written 3 months ago by talbots • 0 • updated 3 months ago by h.mon ♦ 31k
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Time to align full-length transcripts against a reference
assembly canu rna-seq hifiasm pacbio written 4 months ago by pablo • 150 • updated 3 months ago by colindaven • 2.5k
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Different barcodes on demultiplexed data
sequel barcodes pacbio demultiplexing written 4 months ago by pablo • 150
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153
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Difference SMRTlink / SMRTtools
smrttools pacbio smrtlink written 4 months ago by pablo • 150 • updated 4 months ago by genomax ♦ 92k
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News: ONLINE COURSE. Eukaryotic genome assembly USING Pacbio and Hi-C
assembly news long-reads pacbio hi-c written 5 months ago by carlopecoraro2 • 1.8k
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124
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Some question on HGAP installation and use
hgap pacbio genome assembly written 5 months ago by nanoide • 60
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205
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Error with pb-assembly using falcon
assembly falcon pacbio written 5 months ago by aditi.thakare.14 • 0 • updated 5 months ago by h.mon ♦ 31k
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installing SMRTtools 7 on MacOS error
smrttools pacbio written 6 months ago by Tatyana.sysoeva • 0 • updated 6 months ago by ATpoint ♦ 41k
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Tutorial: Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
pbalign tutorial polishing pacbio arrow smrt limk written 3.2 years ago by Rox • 1.2k • updated 6 months ago by zjl1983 • 0
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--barcode-mismatch equivalent in lima
barcode lima pacbio written 7 months ago by rebecca.ryan • 0
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213
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Demultiplex PacBio CCS reads on Mac
next-gen demultiplex pacbio sequencing written 8 months ago by manthony5955 • 0
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How can I fix frameshift errors in assembled genome?
assembly genome polishing pacbio written 8 months ago by star715 • 20 • updated 8 months ago by predeus • 1.4k
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Long read UMI
umi onp pacbio fastp written 8 months ago by lager • 0
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Multiple mapping with longreads - Get primary mapping
minimap2 long reads samtools mapping pacbio written 8 months ago by ricardoguerreiro2121 • 60 • updated 8 months ago by WouterDeCoster ♦ 44k
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Polishing genome with pacbio reads
quiver pacbio assembly written 8 months ago by star715 • 20
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Transcript length distribution plot, based on genome + annotation
genome pacbio written 8 months ago by tanya_fiskur • 40 • updated 8 months ago by benformatics • 2.0k
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Principled structural variation detection with assembled genomes or pacbio reads
genome assembly smrt structural-variation pacbio written 5.0 years ago by hbw • 70 • updated 9 months ago by Manish • 10
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