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<prev • 155 results • page 1 of 6 • next >
6
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746
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Any state of the art tool for reads generation from reference sequence?
illumina reads generation pacbio reads simulation written 2.0 years ago by Alex • 1.4k
21
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2
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2.2k
views
15 follow
2
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Tutorial: Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
pbalign tutorial polishing pacbio arrow smrt limk written 7 months ago by Roxane Boyer • 510 • updated 10 weeks ago by elipow1 • 0
2
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1
answer
3.3k
views
1
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PacBio Long Read error correction through PBcR --> pacbio.spec field
errorcorrection celera pacbio longreads written 3.5 years ago by auroramaurizio1 • 20 • updated 3.4 years ago by geek_y ♦ 8.3k
4
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1
answer
1.4k
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1
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de novo hybrid assembly of transcriptome - Illumina PE and PacBio Full-length reads
latest illumina pacbio rna-seq assembly written 2.6 years ago by Bade • 20
1
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1
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1.4k
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1
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Principled structural variation detection with assembled genomes or pacbio reads
genome assembly smrt structural-variation pacbio written 2.4 years ago by hbw • 70 • updated 4 months ago by Biostar ♦♦ 20
6
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1
answer
701
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1
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PacBio reads mapping statistics abnormaly high
mapping pacbio written 2.1 years ago by alexis.groppi • 20 • updated 2.1 years ago by WouterDeCoster ♦ 27k
4
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2
answers
854
views
2
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Semi global (end gap free) alignment of long reads?
alignment pacbio written 2.0 years ago by rrwick • 20
3
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0
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1.3k
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6 follow
0
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Why we need 100X coverage to get a high-quality assembly?
genome assembly coverage pacbio written 17 months ago by lamz138138 • 10
3
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0
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835
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0
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PacBio genome assembly with canu shorter than expected
genome assembly pacbio canu written 15 months ago by Rob • 90
11
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1
answer
1.1k
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6 follow
1
answer
What can I do after my Pacbio genome assembly ?
pacbio written 13 months ago by Picasa • 340 • updated 13 months ago by Roxane Boyer • 510
1
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0
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723
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7 follow
0
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Canu ERROR: File supplied on command line; use -s, -pacbio-raw, -pacbio-corrected, -nanopore-raw, or -nanopore-corrected.
assembly pacbio canu written 12 months ago by lbrutscher • 10 • updated 7 months ago by knudnornielsen • 0
3
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2
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760
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9 follow
2
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Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 9 months ago by celeste • 20 • updated 8 months ago by tjduncan • 130
4
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2
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3.0k
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2
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ERROR while using PBcR
assembly pacbio sequencing written 3.8 years ago by Medhat • 7.5k • updated 3.8 years ago by Charles Warden ♦ 5.0k
2
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1
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1.7k
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1
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Pacbio: How to generate Unitigs.fa for ECTools correst.sh ?
assembly pacbio ectools written 3.8 years ago by geek_y ♦ 8.3k • updated 3.8 years ago by richard.james.hall • 20
1
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1
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1.6k
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1
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What do you use to generates summary statistics of sequence and quality data for PacBio?
genome assembly next-gen pacbio sequence written 3.7 years ago by Medhat • 7.5k • updated 3.7 years ago by Biomonika (Noolean) ♦ 3.0k
2
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0
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2.2k
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0
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BWA_MEM on PacBio Reads
bwa-mem pacbio written 3.6 years ago by auroramaurizio1 • 20
2
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1
answer
2.3k
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1
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How PacBio quality is calculated?
alignment pacbio sequencing written 3.6 years ago by Medhat • 7.5k • updated 3.6 years ago by rhall • 160
3
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1
answer
1.4k
views
1
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Looking for a bam file with aligned (error corrected) PacBio reads
bam pacbio written 3.6 years ago by William • 4.2k • updated 3.6 years ago by Coryza • 360
3
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3
answers
1.8k
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3
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PacBio Technology Assemblers
assembly long reads pacbio written 3.6 years ago by midox • 190 • updated 16 months ago by Picasa • 340
2
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3
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2.1k
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3
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aligner for CORRECTED pacbio long reads
reads pacbio align longreads sequencing written 3.3 years ago by cmo • 30 • updated 15 months ago by Felix Francis • 430
8
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4
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7.0k
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6 follow
4
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Pacbio: extract fastq from h5 file based on quality filtering
assembly hgap long reads celera pacbio written 3.2 years ago by merodev • 70 • updated 17 months ago by mehmetgoktay1989 • 0
0
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0
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1.4k
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0
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PacBio transcriptome and gene annotation
genes maker pacbio transcriptome written 3.2 years ago by Alex • 1.4k • updated 3.2 years ago by Biostar ♦♦ 20
1
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0
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1.1k
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0
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Forum: PacBio Library Prep workshop and PacBio SMART-Portal bootcamp - UC Davis - April 2015
genome assembly forum pacbio sequencing written 3.1 years ago by DNATECH • 10
1
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0
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846
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0
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recognize known isoform from transcript mapping
alignment isoform pacbio written 3.1 years ago by ghbore • 0 • updated 7 months ago by Biostar ♦♦ 20
1
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1
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1.0k
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1
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PBcR using less than 25X for error correction in PacBIo
pacbio pbcr error error-correction written 3.1 years ago by merodev • 70 • updated 3.0 years ago by orange • 30
0
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1
answer
993
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1
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Pacbio Circularizing and trimming error
pacbio written 3.1 years ago by HG • 1.1k • updated 3.1 years ago by k.mamoud • 10
3
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1
answer
1.4k
views
1
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Ideal coverage required for PacBio error correction using HGAP
illumina hgap error correction pacbio written 3.1 years ago by Felix Francis • 430
6
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1
answer
2.7k
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1
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PacBio coverage question for a plant genome
assembly coverage pacbio written 3.0 years ago by arnstrm • 1.6k • updated 3.0 years ago by thackl • 2.4k
7
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2
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2.9k
views
2
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Is it possible to convert fastq format to PacBio bax.h5 file?
fastq format pacbio written 3.0 years ago by pengchy • 370 • updated 3.0 years ago by Brian Bushnell ♦ 15k
1
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1
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878
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1
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sequencing through heterochromatin (e.g. with PacBio)
heterochromatin pacbio sequencing written 2.9 years ago by Biomonika (Noolean) ♦ 3.0k • updated 2.9 years ago by h.mon ♦ 13k
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