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6
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0
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528
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0
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Any state of the art tool for reads generation from reference sequence?
illumina reads generation pacbio reads simulation written 16 months ago by Alex • 1.4k
2
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1
answer
3.0k
views
1
answer
PacBio Long Read error correction through PBcR --> pacbio.spec field
errorcorrection celera pacbio longreads written 2.9 years ago by auroramaurizio1 • 20 • updated 2.7 years ago by geek_y ♦ 7.7k
4
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1
answer
1.0k
views
1
answer
de novo hybrid assembly of transcriptome - Illumina PE and PacBio Full-length reads
latest illumina pacbio rna-seq assembly written 22 months ago by Bade • 20
1
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1
answer
1.0k
views
1
answer
Principled structural variation detection with assembled genomes or pacbio reads
genome assembly smrt structural-variation pacbio written 21 months ago by hbw • 60 • updated 17 months ago by ivminkin • 0
2
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1
answer
447
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1
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PacBio reads mapping statistics abnormaly high
mapping pacbio written 16 months ago by alexis.groppi • 10 • updated 16 months ago by WouterDeCoster ♦ 20k
4
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2
answers
547
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2
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Semi global (end gap free) alignment of long reads?
alignment pacbio written 16 months ago by rrwick • 20
3
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0
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458
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0
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PacBio genome assembly with canu shorter than expected
genome assembly pacbio canu written 7 months ago by Rob • 80
3
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2
answers
259
views
8 follow
2
answers
Assembling PacBio reads using a reference genome
assembly resequencing reference pacbio written 5 weeks ago by celeste • 20 • updated 9 days ago by tjduncan • 0
4
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2
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2.8k
views
2
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ERROR while using PBcR
assembly pacbio sequencing written 3.1 years ago by Medhat • 6.8k • updated 3.1 years ago by Charles Warden ♦ 4.8k
2
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1
answer
1.5k
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1
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Pacbio: How to generate Unitigs.fa for ECTools correst.sh ?
assembly pacbio ectools written 3.1 years ago by geek_y ♦ 7.7k • updated 3.1 years ago by richard.james.hall • 20
1
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1
answer
1.4k
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1
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What do you use to generates summary statistics of sequence and quality data for PacBio?
genome assembly next-gen pacbio sequence written 3.0 years ago by Medhat • 6.8k • updated 3.0 years ago by Biomonika (Noolean) ♦ 2.9k
2
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0
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1.8k
views
0
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BWA_MEM on PacBio Reads
bwa-mem pacbio written 2.9 years ago by auroramaurizio1 • 20
2
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1
answer
1.9k
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1
answer
How PacBio quality is calculated?
alignment pacbio sequencing written 2.9 years ago by Medhat • 6.8k • updated 2.9 years ago by rhall • 160
3
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1
answer
1.1k
views
1
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Looking for a bam file with aligned (error corrected) PacBio reads
bam pacbio written 2.9 years ago by William • 3.9k • updated 2.9 years ago by Coryza • 360
3
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3
answers
1.5k
views
3
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PacBio Technology Assemblers
assembly long reads pacbio written 2.9 years ago by midox • 180 • updated 8 months ago by Picasa • 300
2
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3
answers
1.8k
views
3
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aligner for CORRECTED pacbio long reads
reads pacbio align longreads sequencing written 2.6 years ago by cmo • 30 • updated 7 months ago by Felix Francis • 400
8
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4
answers
5.7k
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6 follow
4
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Pacbio: extract fastq from h5 file based on quality filtering
assembly hgap long reads celera pacbio written 2.5 years ago by merodev • 30 • updated 9 months ago by mehmetgoktay1989 • 0
0
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0
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1.1k
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0
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PacBio transcriptome and gene annotation
genes maker pacbio transcriptome written 2.5 years ago by Alex • 1.4k • updated 2.5 years ago by Biostar ♦♦ 20
1
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0
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894
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0
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Forum: PacBio Library Prep workshop and PacBio SMART-Portal bootcamp - UC Davis - April 2015
genome assembly forum pacbio sequencing written 2.5 years ago by DNATECH • 10
0
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0
answers
647
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0
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recognize known isoform from transcript mapping
alignment isoform pacbio written 2.4 years ago by ghbore • 0 • updated 5 months ago by Biostar ♦♦ 20
1
vote
1
answer
836
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1
answer
PBcR using less than 25X for error correction in PacBIo
pacbio pbcr error error-correction written 2.4 years ago by merodev • 30 • updated 2.4 years ago by orange • 30
0
votes
1
answer
805
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1
answer
Pacbio Circularizing and trimming error
pacbio written 2.4 years ago by HG • 970 • updated 2.4 years ago by k.mamoud • 10
3
votes
1
answer
1.2k
views
1
answer
Ideal coverage required for PacBio error correction using HGAP
illumina hgap error correction pacbio written 2.4 years ago by Felix Francis • 400
6
votes
1
answer
2.3k
views
1
answer
PacBio coverage question for a plant genome
assembly coverage pacbio written 2.3 years ago by arnstrm • 1.5k • updated 2.3 years ago by thackl • 2.3k
7
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2
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2.5k
views
2
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Is it possible to convert fastq format to PacBio bax.h5 file?
fastq format pacbio written 2.3 years ago by pengchy • 350 • updated 2.3 years ago by Brian Bushnell ♦ 13k
1
vote
1
answer
713
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1
answer
sequencing through heterochromatin (e.g. with PacBio)
heterochromatin pacbio sequencing written 2.2 years ago by Biomonika (Noolean) ♦ 2.9k • updated 2.2 years ago by h.mon ♦ 8.0k
7
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3
answers
1.4k
views
3
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PacBio data assembly with Celera
assembly celera pacbio written 2.2 years ago by mhasa006 • 10 • updated 2.2 years ago by thackl • 2.3k
10
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2
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1.3k
views
2
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PacBio Sequence name
fastq pacbio written 2.2 years ago by apt.university • 70 • updated 2.2 years ago by jkaralius • 80
1
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2
answers
1.3k
views
2
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Pulse information of PacBio data
methylation pacbio written 2.2 years ago by mhasa006 • 10 • updated 15 months ago by Charles Warden ♦ 4.8k
0
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0
answers
662
views
0
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LSC alignment error
software error assembly sequence pacbio written 2.1 years ago by Medhat • 6.8k
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