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<prev • 30 results • page 1 of 1 • next >
2
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1
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83
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1
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bowtie2 paired end insertion length
bowtie2 ngs alignment paired end written 6 days ago by jesselee516 • 70 • updated 5 days ago by d-cameron • 1.8k
4
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1
answer
160
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1
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How can overlap with paired end sequence??
cigar paired end alignment tablet written 11 weeks ago by 2012secondseason • 10 • updated 11 weeks ago by d-cameron • 1.8k
0
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0
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216
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0
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kmergenie input forward and reverse reads
kmergenie paired end kmer written 5 months ago by deepti1rao • 0 • updated 4 months ago by Biostar ♦♦ 20
16
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2
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1.4k
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2
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Why mate-Paired end, Paired-end and Single End reads library to be combined for assembling?
assembly paired end mate-pair single end written 20 months ago by saranpons3 • 50 • updated 5 months ago by Biostar ♦♦ 20
0
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0
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435
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0
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Replacing Illumina index in header of reads
headers next-gen paired end sequencing written 6 months ago by john.soghigian • 0
1
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0
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349
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0
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What is the orientation of the sequences in illumina paired end output file?
illumina next-gen paired end written 7 months ago by Shanika • 0
0
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0
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278
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0
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how to find the amplified region from aln.bam file
amplicon paired end mi-seq written 7 months ago by trisha • 10
3
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0
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380
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0
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Dereplication step leads to increased file size
wgs metagenomics paired end qc written 11 months ago by aditijangid66 • 0 • updated 9 months ago by Ram ♦ 15k
3
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1
answer
354
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1
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What kind of advantage does PEAR bring?
paired end pear single end written 9 months ago by CY • 130 • updated 9 months ago by h.mon ♦ 15k
2
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2
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533
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2
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Is there any software that can highlight or show the paired end reads within .sam file?
genome highlight paired end mapping sam written 10 months ago by allenyang2003 • 0 • updated 10 months ago by Dan D ♦ 6.5k
2
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0
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704
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0
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joining paired end illumina data for metagenomic analysis
illumina 16s paired end metagenome qiime written 13 months ago by cvu • 110
1
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0
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713
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0
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splitting fastq files output size issue
trinity fastq paired end written 20 months ago by adrilu.romero • 0
1
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3
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865
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3
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Determining Paired-end or Mate-pair insert length in De Novo Sequencing
de novo paired end mate pair written 22 months ago by sameedmsiddiqui • 0 • updated 22 months ago by Charles Plessy • 2.5k
0
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2
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586
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2
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New isoform discovery with paired end reads across different exons
paired end rna-seq isoform written 23 months ago by thomasterTW • 20 • updated 23 months ago by EagleEye • 5.3k
3
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1
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2.3k
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1
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Trim Galore Bug?
trim galore paired end written 23 months ago by datascientist28 • 330 • updated 23 months ago by dariober ♦ 9.2k
4
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1
answer
506
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1
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What is the default output format of current gen sequencing machine?
sequencing output format paired end single end written 23 months ago by Jenez • 510
7
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1
answer
590
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1
answer
Paired end alignment issue
paired end tophat alignment bowtie sequencing written 2.1 years ago by anjanaram1 • 70 • updated 2.1 years ago by Antonio R. Franco • 3.7k
16
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6
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3.7k
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6
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paired end illumina reads
assembly paired end written 2.7 years ago by midox • 190 • updated 2.3 years ago by jomo018 • 330
2
votes
1
answer
960
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1
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Overlapping paired end read simulator
simulator ngs paired end illumina metasim written 2.5 years ago by eheizer31 • 0 • updated 2.5 years ago by Brian Bushnell ♦ 15k
1
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1
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1.2k
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1
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Average insert size of PE library based on the bioanalyzer results
average insert size paired end rna-seq bioanalyzer written 2.7 years ago by seta • 990 • updated 2.6 years ago by h.mon ♦ 15k
2
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3
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1.7k
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3
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reverse complement in Assembly!
assembly paired paired end written 2.7 years ago by midox • 190
8
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1
answer
930
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1
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Illumina PE - what are causes for coverage drops?
illumina paired end coverage written 2.7 years ago by mschmid • 90 • updated 2.7 years ago by thackl • 2.5k
0
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1
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790
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1
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DiscoSNP 2.2.0 paired end reads
discosnp paired end written 2.8 years ago by tkitapci • 60 • updated 2.8 years ago by pierre.peterlongo • 820
1
vote
1
answer
994
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1
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Nice open source alternative to "contig viewer" in SeqMan Pro
seqman contig paired end written 2.8 years ago by mschmid • 90 • updated 2.8 years ago by Lesley Sitter • 440
2
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2
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2.4k
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2
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paired end quality filtering
illumina fastq paired end filter written 2.8 years ago by sun.nation • 110 • updated 2.8 years ago by h.mon ♦ 15k
0
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1
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1.6k
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1
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Automating Paired End mating
assembly automation paired end illumina written 3.5 years ago by Furor • 40 • updated 3.5 years ago by marina.v.yurieva • 410
7
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3
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4.3k
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3
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Roche 454: How to know if reads are paired ?
paired-end paired end 454 fastq hts written 3.8 years ago by pastatonio78 • 20 • updated 3.8 years ago by rtliu • 2.0k
2
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0
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1.5k
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0
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tophat2 reported the same alignment twice for the same read (paired end data)
tophat2 tophat paired end igb rna-seq written 3.9 years ago by Ann • 2.2k
6
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1
answer
2.4k
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1
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Questions about MaSuRCA assembly program
assembly paired end masurca mate pairs written 4.0 years ago by arnstrm • 1.6k • updated 3.9 years ago by rtliu • 2.0k
4
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1
answer
1.2k
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1
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How to make Bowtie 2 align the following reads as pairs?
bowtie 2 paired end written 4.0 years ago by John Smith • 230 • updated 4.0 years ago by K.Nijbroek • 100
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